Csa2G034630 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G034630
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 3400438 .. 3400691 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACTAAGGCGACGGATTCGAAGGCGGTGGTGACGGACCAAAGGACTTCGTCAATAATGGAAAAGTTGAGAAGGCCGCGACGCCAGCGGCGGAACCAGGCGGAGGAGGTCCAGTTCCATGAGAAAAGCGAGGAGAGAAGGTGAGTCCATCGGAAAATGGAGGATCTGATGGAAAAATCGAATTCGGCCCAAGGGAATGCGGATCTCGGTGAGGTTCCCGCCATTGCAGTCTCCTACTCCGGAAAGTGTAG

mRNA sequence

ATGGAGACTAAGGCGACGGATTCGAAGGCGGTGGTGACGGACCAAAGGACTTCGTCAATAATGGAAAAGTTGAGAAGGCCGCGACGCCAGCGGCGGAACCAGGCGGAGGAGGTCCAGTTCCATGAGAAAAGCGAGGAGAGAAGTCTCCTACTCCGGAAAGTGTAG

Coding sequence (CDS)

ATGGAGACTAAGGCGACGGATTCGAAGGCGGTGGTGACGGACCAAAGGACTTCGTCAATAATGGAAAAGTTGAGAAGGCCGCGACGCCAGCGGCGGAACCAGGCGGAGGAGGTCCAGTTCCATGAGAAAAGCGAGGAGAGAAGTCTCCTACTCCGGAAAGTGTAG

Protein sequence

METKATDSKAVVTDQRTSSIMEKLRRPRRQRRNQAEEVQFHEKSEERSLLLRKV*
Homology
[Close]
BLAST of Csa2G034630 vs. TrEMBL
Match: A0A0A0LGJ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G034630 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.1e-20
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 1 

Query: 1  METKATDSKAVVTDQRTSSIMEKLRRPRRQRRNQAEEVQFHEKSEERSLLLRKV 55
          METKATDSKAVVTDQRTSSIMEKLRRPRRQRRNQAEEVQFHEKSEERSLLLRKV
Sbjct: 1  METKATDSKAVVTDQRTSSIMEKLRRPRRQRRNQAEEVQFHEKSEERSLLLRKV 54

[Close]
BLAST of Csa2G034630 vs. NCBI nr
Match: gi|700205891|gb|KGN61010.1| (hypothetical protein Csa_2G034630 [Cucumis sativus])

HSP 1 Score: 105.5 bits (262), Expect = 3.0e-20
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 1 

Query: 1  METKATDSKAVVTDQRTSSIMEKLRRPRRQRRNQAEEVQFHEKSEERSLLLRKV 55
          METKATDSKAVVTDQRTSSIMEKLRRPRRQRRNQAEEVQFHEKSEERSLLLRKV
Sbjct: 1  METKATDSKAVVTDQRTSSIMEKLRRPRRQRRNQAEEVQFHEKSEERSLLLRKV 54

The following BLAST results are available for this feature:
BLAST of Csa2G034630 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGJ2_CUCSA2.1e-20100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G034630 PE=4 SV=1[more]
BLAST of Csa2G034630 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700205891|gb|KGN61010.1|3.0e-20100.00hypothetical protein Csa_2G034630 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU160804cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G034630.1Csa2G034630.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU160804CU160804transcribed_cluster