Csa2G023890 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G023890
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionLipoxygenase; contains IPR000907 (Lipoxygenase)
LocationChr2 : 2795743 .. 2796582 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTATCCATTTGCTGTTGATGGTCTTGACATTTGGTCAGCCATTAAAACATGGGTACAGGATTATTGCTGTCTCTACTACAAAGATGACAATGCAGTACAAAATGACTTTGAACTCCAATCTTGGTGGAATGAGCTAAGAGAGAAAGGCCACGCTGACAAGAAACATGAACCATGGTGGCCAAAAATGCAAACTTTAAGTGAATTAATCGAATCCTGCACTACAATTATATGGATTGCTTCAGCTCTTCATGCCGCAGTTAACTTTGGACAATATCCCTACGGAGGCTATATTCTCAATCGACCAACTACAAGTCGTAGGTTCATGCCTGAAGTTGGCACGGCTGAGTACAAAGAACTGGAATCGAATCCCGAAAAAGCTTTCTTGAGAACAATATGTTCAGAATTACAAGCACTTGTTAGTATTTCAATTATTGAAATCTTGTCAAAGCATGCTTCTGATGAAGTTTATCTTGGACAAAGAGCTTCAATTGATTGGACTTCAGATAAAATTGCATTGGAAGCATTTGAGAAATTTGGGAAAAATTTATTTGAAGTTGAGAATAGGATCATGGAAAGGAATAAAGAGGTGAATTTGAAGAATAGATCTGGACCTGTTAATTTGCCTTATACTCTACTTGTTCCATCAAGTAATGAAGGACTCACTGGAAGAGGAATTCCTAATAGTATTTCTATCTAAGTTGATAAGAAAGAAAAGTGGTTCTTTTTATGGGTGACGTGTGTAATTTGAAGGTCACAAATTACATTTTAAGTTGCCCACATTATTATTATGAAGGAAATAAATGACCATATTTTTAGTTTAATTTAAATTAGGTAGC

mRNA sequence

ATGATTATCCATTTGCTGTTGATGGTCTTGACATTTGGTCAGCCATTAAAACATGGTCGTAGGTTCATGCCTGAAGTTGGCACGGCTGAGTACAAAGAACTGGAATCGAATCCCGAAAAAGCTTTCTTGAGAACAATATGTTCAGAATTACAAGCACTTGTTAGTATTTCAATTATTGAAATCTTGTCAAAGCATGCTTCTGATGAAGTTTATCTTGGACAAAGAGCTTCAATTGATTGGACTTCAGATAAAATTGCATTGGAAGCATTTGAGAAATTTGGGAAAAATTTATTTGAAGTTGAGAATAGGATCATGGAAAGGAATAAAGAGGTGAATTTGAAGAATAGATCTGGACCTGTTAATTTGCCTTATACTCTACTTGTTCCATCAAGTAATGAAGGACTCACTGGAAGAGGAATTCCTAATAGTATTTCTATCTAA

Coding sequence (CDS)

ATGATTATCCATTTGCTGTTGATGGTCTTGACATTTGGTCAGCCATTAAAACATGGTCGTAGGTTCATGCCTGAAGTTGGCACGGCTGAGTACAAAGAACTGGAATCGAATCCCGAAAAAGCTTTCTTGAGAACAATATGTTCAGAATTACAAGCACTTGTTAGTATTTCAATTATTGAAATCTTGTCAAAGCATGCTTCTGATGAAGTTTATCTTGGACAAAGAGCTTCAATTGATTGGACTTCAGATAAAATTGCATTGGAAGCATTTGAGAAATTTGGGAAAAATTTATTTGAAGTTGAGAATAGGATCATGGAAAGGAATAAAGAGGTGAATTTGAAGAATAGATCTGGACCTGTTAATTTGCCTTATACTCTACTTGTTCCATCAAGTAATGAAGGACTCACTGGAAGAGGAATTCCTAATAGTATTTCTATCTAA

Protein sequence

MIIHLLLMVLTFGQPLKHGRRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASIDWTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGRGIPNSISI*
Homology
[Close]
BLAST of Csa2G023890 vs. Swiss-Prot
Match: LOX15_SOLTU (Probable linoleate 9S-lipoxygenase 5 OS=Solanum tuberosum GN=LOX1.5 PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.5e-42
Identity = 80/127 (62.99%), Postives = 104/127 (81.89%), Query Frame = 1 

Query: 20  RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID 79
           RRFMPE GT EY+EL++NP+KA+L+TI  +LQ L+ IS+IEILS+HASDE+YLGQR S +
Sbjct: 736 RRFMPEPGTPEYEELKTNPDKAYLKTITPQLQTLLGISLIEILSRHASDEIYLGQRDSSE 795

Query: 80  WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGRG 139
           WT D+  + AFE+FGK L E+E++I++ N +   KNRSGPVN+PYTLL P+S +GLTG+G
Sbjct: 796 WTKDQEPIAAFERFGKKLSEIEDQIIQMNGDKKWKNRSGPVNVPYTLLFPTSEQGLTGKG 855

Query: 140 IPNSISI 147
           IPNS+SI
Sbjct: 856 IPNSVSI 862

[Close]
BLAST of Csa2G023890 vs. Swiss-Prot
Match: LOX3_SOYBN (Seed linoleate 9S-lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.5e-42
Identity = 81/127 (63.78%), Postives = 102/127 (80.31%), Query Frame = 1 

Query: 20  RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID 79
           RRFMPE G+AEY+EL  NP+KA+L+TI  + Q L+ +S+IEILS+HASDEVYLG+R + +
Sbjct: 731 RRFMPEKGSAEYEELRKNPQKAYLKTITPKFQTLIDLSVIEILSRHASDEVYLGERDNPN 790

Query: 80  WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGRG 139
           WTSD  ALEAF++FG  L ++EN++ ERN +  L+NR GPV +PYTLL+PSS EGLT RG
Sbjct: 791 WTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPSSKEGLTFRG 850

Query: 140 IPNSISI 147
           IPNSISI
Sbjct: 851 IPNSISI 857

[Close]
BLAST of Csa2G023890 vs. Swiss-Prot
Match: LOX16_SOLTU (Linoleate 9S-lipoxygenase 6 (Fragment) OS=Solanum tuberosum GN=LOX1.6 PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.3e-41
Identity = 80/127 (62.99%), Postives = 101/127 (79.53%), Query Frame = 1 

Query: 20  RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID 79
           RRFMPE GT EY+EL+ NP+KAFL+TI ++LQ L+ +S+IEILS+H +DE+YLGQR S +
Sbjct: 731 RRFMPEPGTPEYEELKKNPDKAFLKTITAQLQTLLGVSLIEILSRHTTDEIYLGQRESPE 790

Query: 80  WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGRG 139
           WT DK  L AF+KFGK L ++E +I++RN +  L NRSGPVN PYTLL P+S  GLTG+G
Sbjct: 791 WTKDKEPLAAFDKFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLLFPTSEGGLTGKG 850

Query: 140 IPNSISI 147
           IPNS+SI
Sbjct: 851 IPNSVSI 857

[Close]
BLAST of Csa2G023890 vs. Swiss-Prot
Match: LOX12_SOLTU (Linoleate 9S-lipoxygenase 2 OS=Solanum tuberosum GN=LOX1.2 PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.3e-41
Identity = 80/127 (62.99%), Postives = 101/127 (79.53%), Query Frame = 1 

Query: 20  RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID 79
           RRFMPE GT EY+EL+ NP+KAFL+TI ++LQ L+ +S+IEILS+H +DE+YLGQR S +
Sbjct: 735 RRFMPEPGTPEYEELKKNPDKAFLKTITAQLQTLLGVSLIEILSRHTTDEIYLGQRESPE 794

Query: 80  WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGRG 139
           WT DK  L AF+KFGK L ++E +I++RN +  L NRSGPVN PYTLL P+S  GLTG+G
Sbjct: 795 WTKDKEPLAAFDKFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLLFPTSEGGLTGKG 854

Query: 140 IPNSISI 147
           IPNS+SI
Sbjct: 855 IPNSVSI 861

[Close]
BLAST of Csa2G023890 vs. Swiss-Prot
Match: LOX14_SOLTU (Probable linoleate 9S-lipoxygenase 4 OS=Solanum tuberosum GN=LOX1.4 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.1e-41
Identity = 80/127 (62.99%), Postives = 101/127 (79.53%), Query Frame = 1 

Query: 20  RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID 79
           RRFMPE GT EY+EL+ NP+KAFL+TI ++LQ L+ +S+IEILS+H +DE+YLGQR S +
Sbjct: 734 RRFMPEPGTPEYEELKKNPDKAFLKTITAQLQTLLGVSLIEILSRHTTDEIYLGQRESPE 793

Query: 80  WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGRG 139
           WT DK  L AF+KFGK L ++E +I++RN +  L NRSGPVN PYTLL P+S  GLTG+G
Sbjct: 794 WTKDKEPLAAFDKFGKKLTDIEKQIIQRNGDNILINRSGPVNAPYTLLFPTSEGGLTGKG 853

Query: 140 IPNSISI 147
           IPNS+SI
Sbjct: 854 IPNSVSI 860

[Close]
BLAST of Csa2G023890 vs. TrEMBL
Match: A0A0A0LJN8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G023890 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 4.6e-75
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1 

Query: 1   MIIHLLLMVLTFGQPLKHGRRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIE 60
           MIIHLLLMVLTFGQPLKHGRRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIE
Sbjct: 1   MIIHLLLMVLTFGQPLKHGRRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIE 60

Query: 61  ILSKHASDEVYLGQRASIDWTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPV 120
           ILSKHASDEVYLGQRASIDWTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPV
Sbjct: 61  ILSKHASDEVYLGQRASIDWTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPV 120

Query: 121 NLPYTLLVPSSNEGLTGRGIPNSISI 147
           NLPYTLLVPSSNEGLTGRGIPNSISI
Sbjct: 121 NLPYTLLVPSSNEGLTGRGIPNSISI 146

[Close]
BLAST of Csa2G023890 vs. TrEMBL
Match: Q42704_CUCSA (Lipoxygenase OS=Cucumis sativus GN=lox1 PE=2 SV=2)

HSP 1 Score: 250.8 bits (639), Expect = 1.1e-63
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1 

Query: 20  RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID 79
           RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID
Sbjct: 752 RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID 811

Query: 80  WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGRG 139
           WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGRG
Sbjct: 812 WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGRG 871

Query: 140 IPNSISI 147
           IPNSISI
Sbjct: 872 IPNSISI 878

[Close]
BLAST of Csa2G023890 vs. TrEMBL
Match: Q42710_CUCSA (Lipoxygenase OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.1e-63
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1 

Query: 20  RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID 79
           RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID
Sbjct: 752 RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID 811

Query: 80  WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGRG 139
           WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGRG
Sbjct: 812 WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGRG 871

Query: 140 IPNSISI 147
           IPNSISI
Sbjct: 872 IPNSISI 878

[Close]
BLAST of Csa2G023890 vs. TrEMBL
Match: B7FDE5_MOMCH (Lipoxygenase OS=Momordica charantia GN=moLOX PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 2.0e-54
Identity = 108/127 (85.04%), Postives = 120/127 (94.49%), Query Frame = 1 

Query: 20  RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID 79
           RRFMPEVGTAEYKE+ESNPEKAFLRTI S++ AL+ +SIIEILSKHASDEVYLGQRASI+
Sbjct: 754 RRFMPEVGTAEYKEVESNPEKAFLRTISSQIVALLGLSIIEILSKHASDEVYLGQRASIE 813

Query: 80  WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGRG 139
           WTSDK A+EAFEKFGK LFEVE+RIM RN++VNLKNR+GPVN+PYTLLVPSS EGLTGRG
Sbjct: 814 WTSDKSAIEAFEKFGKELFEVEDRIMRRNQDVNLKNRAGPVNMPYTLLVPSSTEGLTGRG 873

Query: 140 IPNSISI 147
           IPNSISI
Sbjct: 874 IPNSISI 880

[Close]
BLAST of Csa2G023890 vs. TrEMBL
Match: A0A0A0LGD0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G023850 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 5.8e-54
Identity = 107/145 (73.79%), Postives = 126/145 (86.90%), Query Frame = 1 

Query: 2   IIHLLLMVLTFGQPLKHGRRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEI 61
           IIH+LLMVL FGQ  KHGRRF+PE GT +YKELESNPEKAFLRTI S+LQALV +S+IEI
Sbjct: 79  IIHMLLMVLRFGQQSKHGRRFLPESGTPDYKELESNPEKAFLRTITSQLQALVGVSVIEI 138

Query: 62  LSKHASDEVYLGQRASIDWTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVN 121
           LS+H+SDEVYLGQR++ +WT DK ALEAFEKFG+ L E+E +I  RNK+  LKNR GPV+
Sbjct: 139 LSRHSSDEVYLGQRSNPEWTLDKEALEAFEKFGEKLGEIEKKIAMRNKDPQLKNRVGPVD 198

Query: 122 LPYTLLVPSSNEGLTGRGIPNSISI 147
           +PYTLL P+S+EGLTGRGIPNSISI
Sbjct: 199 MPYTLLFPTSSEGLTGRGIPNSISI 223

[Close]
BLAST of Csa2G023890 vs. TAIR10
Match: AT1G55020.1 (AT1G55020.1 lipoxygenase 1)

HSP 1 Score: 162.2 bits (409), Expect = 2.5e-40
Identity = 78/127 (61.42%), Postives = 99/127 (77.95%), Query Frame = 1 

Query: 20  RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID 79
           R++MP+  T E++ELE NP+K FL+TI ++LQ L+ IS+IEILS H+SDEVYLGQR S +
Sbjct: 733 RQYMPKENTPEFEELEKNPDKVFLKTITAQLQTLLGISLIEILSTHSSDEVYLGQRDSKE 792

Query: 80  WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGRG 139
           W ++K ALEAFEKFG+ + E+E  I ERN +  LKNR+G V +PYTLL PSS  G+TGRG
Sbjct: 793 WAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEGGVTGRG 852

Query: 140 IPNSISI 147
           IPNS+SI
Sbjct: 853 IPNSVSI 859

[Close]
BLAST of Csa2G023890 vs. TAIR10
Match: AT3G22400.1 (AT3G22400.1 PLAT/LH2 domain-containing lipoxygenase family protein)

HSP 1 Score: 156.4 bits (394), Expect = 1.4e-38
Identity = 77/132 (58.33%), Postives = 98/132 (74.24%), Query Frame = 1 

Query: 20  RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID 79
           RRFMPE GT EY ELE + + AFL+TI  +LQ L+ ISIIEILS H++DE+YLGQR S +
Sbjct: 755 RRFMPEPGTDEYAELEEDADVAFLKTITPQLQTLLGISIIEILSMHSTDEIYLGQRDSPN 814

Query: 80  WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNE-----G 139
           WT+D   LEAF++FGK L  +EN I+ RN +   KNR+GPVN+PYTLL P++ +     G
Sbjct: 815 WTADDEPLEAFKRFGKELELIENNIIRRNNDKRFKNRTGPVNIPYTLLYPNTTDYTREGG 874

Query: 140 LTGRGIPNSISI 147
           +TG+GIPNS+SI
Sbjct: 875 ITGKGIPNSVSI 886

[Close]
BLAST of Csa2G023890 vs. TAIR10
Match: AT1G67560.1 (AT1G67560.1 PLAT/LH2 domain-containing lipoxygenase family protein)

HSP 1 Score: 101.7 bits (252), Expect = 4.0e-22
Identity = 53/129 (41.09%), Postives = 79/129 (61.24%), Query Frame = 1 

Query: 20  RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID 79
           R+ +P+    +Y+    NP+ +FL ++ ++LQA   +++ E LS H+ DE YL +   + 
Sbjct: 789 RKLIPQETDPDYEMFMRNPQYSFLGSLPTQLQATKVMAVQETLSTHSPDEEYLIELREVQ 848

Query: 80  --WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTG 139
             W  D+  ++ F KF + L ++E  I ERNK+  LKNR+G    PY LL+P+S  G+TG
Sbjct: 849 RHWFQDEQVVKYFNKFSEELVKIEKTINERNKDKKLKNRTGAGMPPYELLLPTSPHGVTG 908

Query: 140 RGIPNSISI 147
           RGIPNSISI
Sbjct: 909 RGIPNSISI 917

[Close]
BLAST of Csa2G023890 vs. TAIR10
Match: AT1G17420.1 (AT1G17420.1 lipoxygenase 3)

HSP 1 Score: 97.4 bits (241), Expect = 7.6e-21
Identity = 51/128 (39.84%), Postives = 73/128 (57.03%), Query Frame = 1 

Query: 20  RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID 79
           RR +P+    EY    S+PEK +  ++ S  Q    +++++ LS H+ DE Y+G+R    
Sbjct: 792 RRLIPDESDPEYASFISHPEKYYFSSMPSLAQTSKFMAVVDTLSTHSPDEEYIGERQQPS 851

Query: 80  -WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGR 139
            WT D   +EAF  F   +  +E  I +RN + + +NR G   LPY LLVPSS  G+T R
Sbjct: 852 IWTGDAEIVEAFYGFAAEIGRIEKEIEKRNADPDRRNRCGAGVLPYELLVPSSEPGVTCR 911

Query: 140 GIPNSISI 147
           G+PNS+SI
Sbjct: 912 GVPNSVSI 919

[Close]
BLAST of Csa2G023890 vs. TAIR10
Match: AT1G72520.1 (AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein)

HSP 1 Score: 94.0 bits (232), Expect = 8.4e-20
Identity = 47/128 (36.72%), Postives = 73/128 (57.03%), Query Frame = 1 

Query: 20  RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID 79
           RR +P+    E+     +P+K F  ++ S LQ    +++++ LS H+ DE Y+G+R    
Sbjct: 799 RRLIPDESDPEFTSFIEDPQKYFFSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGERQQPS 858

Query: 80  -WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGR 139
            WT D   ++AF  F   +  +E  I +RN++ + +NR G   LPY L+ PSS  G+T R
Sbjct: 859 IWTGDAEIVDAFYGFSAEIGRIEKEIDKRNRDPSRRNRCGAGVLPYELMAPSSEPGVTCR 918

Query: 140 GIPNSISI 147
           G+PNS+SI
Sbjct: 919 GVPNSVSI 926

[Close]
BLAST of Csa2G023890 vs. NCBI nr
Match: gi|700205803|gb|KGN60922.1| (hypothetical protein Csa_2G023890 [Cucumis sativus])

HSP 1 Score: 288.5 bits (737), Expect = 6.6e-75
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1 

Query: 1   MIIHLLLMVLTFGQPLKHGRRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIE 60
           MIIHLLLMVLTFGQPLKHGRRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIE
Sbjct: 1   MIIHLLLMVLTFGQPLKHGRRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIE 60

Query: 61  ILSKHASDEVYLGQRASIDWTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPV 120
           ILSKHASDEVYLGQRASIDWTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPV
Sbjct: 61  ILSKHASDEVYLGQRASIDWTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPV 120

Query: 121 NLPYTLLVPSSNEGLTGRGIPNSISI 147
           NLPYTLLVPSSNEGLTGRGIPNSISI
Sbjct: 121 NLPYTLLVPSSNEGLTGRGIPNSISI 146

[Close]
BLAST of Csa2G023890 vs. NCBI nr
Match: gi|3668063|gb|AAC61785.1| (lipoxygenase 1 [Cucumis sativus])

HSP 1 Score: 250.8 bits (639), Expect = 1.5e-63
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1 

Query: 20  RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID 79
           RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID
Sbjct: 752 RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID 811

Query: 80  WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGRG 139
           WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGRG
Sbjct: 812 WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGRG 871

Query: 140 IPNSISI 147
           IPNSISI
Sbjct: 872 IPNSISI 878

[Close]
BLAST of Csa2G023890 vs. NCBI nr
Match: gi|793420114|ref|NP_001292659.1| (linoleate 9S-lipoxygenase 6-like [Cucumis sativus])

HSP 1 Score: 250.8 bits (639), Expect = 1.5e-63
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1 

Query: 20  RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID 79
           RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID
Sbjct: 752 RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID 811

Query: 80  WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGRG 139
           WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGRG
Sbjct: 812 WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGRG 871

Query: 140 IPNSISI 147
           IPNSISI
Sbjct: 872 IPNSISI 878

[Close]
BLAST of Csa2G023890 vs. NCBI nr
Match: gi|659070313|ref|XP_008454503.1| (PREDICTED: linoleate 9S-lipoxygenase 6-like isoform X1 [Cucumis melo])

HSP 1 Score: 240.0 bits (611), Expect = 2.7e-60
Identity = 122/127 (96.06%), Postives = 124/127 (97.64%), Query Frame = 1 

Query: 20  RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID 79
           RRFMPEVGTAEYKELESNPEKAFLRTI SELQALVSISIIEILSKHASDEVYLGQRASID
Sbjct: 754 RRFMPEVGTAEYKELESNPEKAFLRTISSELQALVSISIIEILSKHASDEVYLGQRASID 813

Query: 80  WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGRG 139
           WTSDKIALEAFEKFGK LFEVENRIMERNK+VNLKNR+GPVNLPYTLLVPSSNEGLT RG
Sbjct: 814 WTSDKIALEAFEKFGKELFEVENRIMERNKDVNLKNRAGPVNLPYTLLVPSSNEGLTARG 873

Query: 140 IPNSISI 147
           IPNSISI
Sbjct: 874 IPNSISI 880

[Close]
BLAST of Csa2G023890 vs. NCBI nr
Match: gi|659070317|ref|XP_008454513.1| (PREDICTED: linoleate 9S-lipoxygenase 6-like isoform X3 [Cucumis melo])

HSP 1 Score: 240.0 bits (611), Expect = 2.7e-60
Identity = 122/127 (96.06%), Postives = 124/127 (97.64%), Query Frame = 1 

Query: 20  RRFMPEVGTAEYKELESNPEKAFLRTICSELQALVSISIIEILSKHASDEVYLGQRASID 79
           RRFMPEVGTAEYKELESNPEKAFLRTI SELQALVSISIIEILSKHASDEVYLGQRASID
Sbjct: 753 RRFMPEVGTAEYKELESNPEKAFLRTISSELQALVSISIIEILSKHASDEVYLGQRASID 812

Query: 80  WTSDKIALEAFEKFGKNLFEVENRIMERNKEVNLKNRSGPVNLPYTLLVPSSNEGLTGRG 139
           WTSDKIALEAFEKFGK LFEVENRIMERNK+VNLKNR+GPVNLPYTLLVPSSNEGLT RG
Sbjct: 813 WTSDKIALEAFEKFGKELFEVENRIMERNKDVNLKNRAGPVNLPYTLLVPSSNEGLTARG 872

Query: 140 IPNSISI 147
           IPNSISI
Sbjct: 873 IPNSISI 879

The following BLAST results are available for this feature:
BLAST of Csa2G023890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LOX15_SOLTU2.5e-4262.99Probable linoleate 9S-lipoxygenase 5 OS=Solanum tuberosum GN=LOX1.5 PE=2 SV=1[more]
LOX3_SOYBN2.5e-4263.78Seed linoleate 9S-lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 SV=1[more]
LOX16_SOLTU1.3e-4162.99Linoleate 9S-lipoxygenase 6 (Fragment) OS=Solanum tuberosum GN=LOX1.6 PE=1 SV=1[more]
LOX12_SOLTU1.3e-4162.99Linoleate 9S-lipoxygenase 2 OS=Solanum tuberosum GN=LOX1.2 PE=1 SV=1[more]
LOX14_SOLTU2.1e-4162.99Probable linoleate 9S-lipoxygenase 4 OS=Solanum tuberosum GN=LOX1.4 PE=2 SV=1[more]
BLAST of Csa2G023890 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJN8_CUCSA4.6e-75100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G023890 PE=4 SV=1[more]
Q42704_CUCSA1.1e-63100.00Lipoxygenase OS=Cucumis sativus GN=lox1 PE=2 SV=2[more]
Q42710_CUCSA1.1e-63100.00Lipoxygenase OS=Cucumis sativus PE=2 SV=1[more]
B7FDE5_MOMCH2.0e-5485.04Lipoxygenase OS=Momordica charantia GN=moLOX PE=2 SV=1[more]
A0A0A0LGD0_CUCSA5.8e-5473.79Uncharacterized protein OS=Cucumis sativus GN=Csa_2G023850 PE=4 SV=1[more]
BLAST of Csa2G023890 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G55020.12.5e-4061.42 lipoxygenase 1[more]
AT3G22400.11.4e-3858.33 PLAT/LH2 domain-containing lipoxygenase family protein[more]
AT1G67560.14.0e-2241.09 PLAT/LH2 domain-containing lipoxygenase family protein[more]
AT1G17420.17.6e-2139.84 lipoxygenase 3[more]
AT1G72520.18.4e-2036.72 PLAT/LH2 domain-containing lipoxygenase family protein[more]
BLAST of Csa2G023890 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700205803|gb|KGN60922.1|6.6e-75100.00hypothetical protein Csa_2G023890 [Cucumis sativus][more]
gi|3668063|gb|AAC61785.1|1.5e-63100.00lipoxygenase 1 [Cucumis sativus][more]
gi|793420114|ref|NP_001292659.1|1.5e-63100.00linoleate 9S-lipoxygenase 6-like [Cucumis sativus][more]
gi|659070313|ref|XP_008454503.1|2.7e-6096.06PREDICTED: linoleate 9S-lipoxygenase 6-like isoform X1 [Cucumis melo][more]
gi|659070317|ref|XP_008454513.1|2.7e-6096.06PREDICTED: linoleate 9S-lipoxygenase 6-like isoform X3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000907LipOase
IPR013819LipOase_C
Vocabulary: Molecular Function
TermDefinition
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0031408 oxylipin biosynthetic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005515 protein binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU120957cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G023890.1Csa2G023890.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU120957CU120957transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000907LipoxygenasePANTHERPTHR11771LIPOXYGENASEcoord: 20..146
score: 1.6
IPR013819Lipoxygenase, C-terminalPFAMPF00305Lipoxygenasecoord: 19..129
score: 2.5
IPR013819Lipoxygenase, C-terminalPROFILEPS51393LIPOXYGENASE_3coord: 1..146
score: 5
IPR013819Lipoxygenase, C-terminalunknownSSF48484Lipoxigenasecoord: 20..146
score: 2.88
NoneNo IPR availableGENE3DG3DSA:1.20.245.10coord: 20..146
score: 5.8
NoneNo IPR availablePANTHERPTHR11771:SF48LINOLEATE 9S-LIPOXYGENASE 1coord: 20..146
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G023890Lsi11G005620Bottle gourd (USVL1VR-Ls)culsiB098
Csa2G023890Cucsa.091290Cucumber (Gy14) v1cgycuB096
Csa2G023890CmoCh05G011270Cucurbita moschata (Rifu)cmocuB781
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G023890Cucurbita pepo (Zucchini)cpecuB820
Csa2G023890Cucumber (Gy14) v2cgybcuB056
Csa2G023890Melon (DHL92) v3.6.1cumedB132
Csa2G023890Silver-seed gourdcarcuB0735
Csa2G023890Watermelon (97103) v2cuwmbB118
Csa2G023890Wax gourdcuwgoB128
Csa2G023890Cucurbita maxima (Rimu)cmacuB173
Csa2G023890Cucurbita maxima (Rimu)cmacuB787
Csa2G023890Cucurbita maxima (Rimu)cmacuB791
Csa2G023890Cucurbita moschata (Rifu)cmocuB157
Csa2G023890Cucurbita moschata (Rifu)cmocuB783
Csa2G023890Melon (DHL92) v3.5.1cumeB139
Csa2G023890Melon (DHL92) v3.5.1cumeB144
Csa2G023890Watermelon (Charleston Gray)cuwcgB122
Csa2G023890Watermelon (97103) v1cuwmB147