Csa2G021670 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCCGAACCAATACCTCTTAGATATTTTTCTCTGAGTCTCATAAATCCTAGTCACATTTCCGACTCCAAAACAGTGGAATCATGAATCTCATAATTGATAGTTCAATACACTCCCACATAAAATAAGACACAGCTAGAAAGTGGATTTGAATTTCCATCTAGTTTTTTGTATTCGTGGAGCAATATTGATTATTTTAAGTGTAGAGAATTTGAGTAAATTTTGTTACCATTCACCTGATTGCAGATGAAGAGGACAATCTTCTCCAAGGCCTAAACAGCTACCGACAAGCACAAAACCTCCCGCCGCTCGTGAAGAACGCAAAAGCCGACTGCGTTGCAAACGAGATGGCCGACGATGCTGAAGACCAACCCTGTGCTGTCACCACCACCAAATCAAACGTCGTTGCAAGCCGACCGTCACAAATCACGAAGTTCCCGGATTACGCCGAGAAATGCAAGGTAGATATCAACACCACCGCTGACGCCGTGGTGATGCCGGTGTGCGTACCAAAACTAGTCCAAACTCTGCTGCTTACGAACTACACCCACTCCCAGTACGCGAAGTATTTGAACGATTCAAGATTCGTCGGTGCGGGGCTAGGGAAGGAAGACGACTGGATGGTGGTGGTTCTGACGACCGGAACGAACGCGGGTAGCTTCGAAGGTTCGGGGGCCGGGCCGGCGTTGGGTTCGATTTGGGTATGGGCAGTGGCGGTTTTGGTAGGGCTTTTGATTGGGGATTATGTGAGATTCTAA ATGAATCTCATAATTGATAATGAAGAGGACAATCTTCTCCAAGGCCTAAACAGCTACCGACAAGCACAAAACCTCCCGCCGCTCGTGAAGAACGCAAAAGCCGACTGCGTTGCAAACGAGATGGCCGACGATGCTGAAGACCAACCCTGTGCTGTCACCACCACCAAATCAAACGTCGTTGCAAGCCGACCGTCACAAATCACGAAGTTCCCGGATTACGCCGAGAAATGCAAGGTAGATATCAACACCACCGCTGACGCCGTGGTGATGCCGGTGTGCGTACCAAAACTAGTCCAAACTCTGCTGCTTACGAACTACACCCACTCCCAGTACGCGAAGTATTTGAACGATTCAAGATTCGTCGGTGCGGGGCTAGGGAAGGAAGACGACTGGATGGTGGTGGTTCTGACGACCGGAACGAACGCGGGTAGCTTCGAAGGTTCGGGGGCCGGGCCGGCGTTGGGTTCGATTTGGGTATGGGCAGTGGCGGTTTTGGTAGGGCTTTTGATTGGGGATTATGTGAGATTCTAA ATGAATCTCATAATTGATAATGAAGAGGACAATCTTCTCCAAGGCCTAAACAGCTACCGACAAGCACAAAACCTCCCGCCGCTCGTGAAGAACGCAAAAGCCGACTGCGTTGCAAACGAGATGGCCGACGATGCTGAAGACCAACCCTGTGCTGTCACCACCACCAAATCAAACGTCGTTGCAAGCCGACCGTCACAAATCACGAAGTTCCCGGATTACGCCGAGAAATGCAAGGTAGATATCAACACCACCGCTGACGCCGTGGTGATGCCGGTGTGCGTACCAAAACTAGTCCAAACTCTGCTGCTTACGAACTACACCCACTCCCAGTACGCGAAGTATTTGAACGATTCAAGATTCGTCGGTGCGGGGCTAGGGAAGGAAGACGACTGGATGGTGGTGGTTCTGACGACCGGAACGAACGCGGGTAGCTTCGAAGGTTCGGGGGCCGGGCCGGCGTTGGGTTCGATTTGGGTATGGGCAGTGGCGGTTTTGGTAGGGCTTTTGATTGGGGATTATGTGAGATTCTAA MNLIIDNEEDNLLQGLNSYRQAQNLPPLVKNAKADCVANEMADDAEDQPCAVTTTKSNVVASRPSQITKFPDYAEKCKVDINTTADAVVMPVCVPKLVQTLLLTNYTHSQYAKYLNDSRFVGAGLGKEDDWMVVVLTTGTNAGSFEGSGAGPALGSIWVWAVAVLVGLLIGDYVRF*
BLAST of Csa2G021670 vs. Swiss-Prot
Match: UGPI4_ARATH (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana GN=At3g06035 PE=2 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 5.2e-34 Identity = 73/170 (42.94%), Postives = 104/170 (61.18%), Query Frame = 1
BLAST of Csa2G021670 vs. Swiss-Prot
Match: UGPI3_ARATH (Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana GN=At5g19250 PE=1 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.1e-31 Identity = 65/139 (46.76%), Postives = 92/139 (66.19%), Query Frame = 1
BLAST of Csa2G021670 vs. Swiss-Prot
Match: UGPI2_ARATH (Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana GN=At5g19240 PE=2 SV=2) HSP 1 Score: 110.5 bits (275), Expect = 1.9e-23 Identity = 59/144 (40.97%), Postives = 85/144 (59.03%), Query Frame = 1
BLAST of Csa2G021670 vs. Swiss-Prot
Match: UGPI1_ARATH (Uncharacterized GPI-anchored protein At5g19230 OS=Arabidopsis thaliana GN=At5g19230 PE=1 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.4e-18 Identity = 52/140 (37.14%), Postives = 72/140 (51.43%), Query Frame = 1
BLAST of Csa2G021670 vs. TrEMBL
Match: A0A0A0LLP1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021670 PE=4 SV=1) HSP 1 Score: 357.5 bits (916), Expect = 9.7e-96 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 1
BLAST of Csa2G021670 vs. TrEMBL
Match: A6YTC7_CUCME (GPI-anchored protein-like protein II OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 1.7e-87 Identity = 162/170 (95.29%), Postives = 165/170 (97.06%), Query Frame = 1
BLAST of Csa2G021670 vs. TrEMBL
Match: W9S359_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002452 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 2.0e-48 Identity = 96/172 (55.81%), Postives = 128/172 (74.42%), Query Frame = 1
BLAST of Csa2G021670 vs. TrEMBL
Match: D7KPZ9_ARALL (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_682778 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 6.0e-45 Identity = 96/175 (54.86%), Postives = 118/175 (67.43%), Query Frame = 1
BLAST of Csa2G021670 vs. TrEMBL
Match: Q9ZVL0_ARATH (Glycoprotein membrane GPI-anchored OS=Arabidopsis thaliana GN=T22H22.25 PE=2 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 3.0e-44 Identity = 94/175 (53.71%), Postives = 117/175 (66.86%), Query Frame = 1
BLAST of Csa2G021670 vs. TAIR10
Match: AT1G54860.1 (AT1G54860.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 186.4 bits (472), Expect = 1.5e-47 Identity = 94/175 (53.71%), Postives = 115/175 (65.71%), Query Frame = 1
BLAST of Csa2G021670 vs. TAIR10
Match: AT3G06035.1 (AT3G06035.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 145.6 bits (366), Expect = 2.9e-35 Identity = 73/170 (42.94%), Postives = 104/170 (61.18%), Query Frame = 1
BLAST of Csa2G021670 vs. TAIR10
Match: AT5G19250.1 (AT5G19250.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 137.9 bits (346), Expect = 6.1e-33 Identity = 65/139 (46.76%), Postives = 92/139 (66.19%), Query Frame = 1
BLAST of Csa2G021670 vs. TAIR10
Match: AT5G19240.1 (AT5G19240.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 110.5 bits (275), Expect = 1.0e-24 Identity = 59/144 (40.97%), Postives = 85/144 (59.03%), Query Frame = 1
BLAST of Csa2G021670 vs. TAIR10
Match: AT5G19230.1 (AT5G19230.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 94.4 bits (233), Expect = 7.7e-20 Identity = 52/140 (37.14%), Postives = 72/140 (51.43%), Query Frame = 1
BLAST of Csa2G021670 vs. NCBI nr
Match: gi|700205777|gb|KGN60896.1| (hypothetical protein Csa_2G021670 [Cucumis sativus]) HSP 1 Score: 357.5 bits (916), Expect = 1.4e-95 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 1
BLAST of Csa2G021670 vs. NCBI nr
Match: gi|778666768|ref|XP_011648805.1| (PREDICTED: uncharacterized GPI-anchored protein At3g06035-like [Cucumis sativus]) HSP 1 Score: 344.4 bits (882), Expect = 1.2e-91 Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 1
BLAST of Csa2G021670 vs. NCBI nr
Match: gi|659070384|ref|XP_008454814.1| (PREDICTED: uncharacterized GPI-anchored protein At3g06035 [Cucumis melo]) HSP 1 Score: 330.1 bits (845), Expect = 2.4e-87 Identity = 162/170 (95.29%), Postives = 165/170 (97.06%), Query Frame = 1
BLAST of Csa2G021670 vs. NCBI nr
Match: gi|703135332|ref|XP_010105845.1| (hypothetical protein L484_002452 [Morus notabilis]) HSP 1 Score: 200.3 bits (508), Expect = 2.8e-48 Identity = 96/172 (55.81%), Postives = 128/172 (74.42%), Query Frame = 1
BLAST of Csa2G021670 vs. NCBI nr
Match: gi|1009117190|ref|XP_015875183.1| (PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Ziziphus jujuba]) HSP 1 Score: 194.5 bits (493), Expect = 1.6e-46 Identity = 92/173 (53.18%), Postives = 130/173 (75.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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