Csa2G008030 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTTCGCCGAGAGAATTGAGACGAAGAACACGCTGCTTCCACTTCTTCATAAGCAAGTAGGAAATGATGAGCTGAAACCACCAACAGCTGGATCCACCATGACTAAGAAAGGAGCTTATGCTGCTATTTCTTATATGGCTTCCGCTGGTTCGTTTTTTTCACTTTCTCCTTCCATGTTTCTATGCTGTTTTAGGACTTATTCTACTTTGGAATATTGCATGGAAGCTAGAAATACTCTGCTCTTCATTTTTGTTCCATACGTTTAGTGACAACATGCCTTTGGATATCTTTGACGTAGTATGATATTGTTCAATTTGAACGTGAACTCTGATGAGTTTGCTTTTGGTTTCACAACAAAATTTCTTATACCAATACCAATGGATATAGTTTTCTGCATTCCCAAAATCCTCCCCTCGTGGAGCCCGATAGTCATCCTCCTGTCTAACTCTTATCTAGACTAACTCCTCTTTCCCGGAGCACATCATTCGAGGCTCCATTATATCTTTGTTCGACACTTAAGGATCCTATCGGCACGGTTAAGTTATGAGCATGAATCTTATACCAATTGTTAGTGACAAAAATTCCTTTAGATATCTTCGTACATGTGTGATATTGTCAACTTTGGGCTTAATAACTTGTGACTTTGTTTTTGGTTTCACCTTAAAAAGTCTTGTACCAATGAAGATAGTTTTCCTCATTTGTAAGACTCTATACTCCAAATACCACTTGTTTGTTTCTGTTTTCACTTTTGGATTCTTCCAAATCGCTTTGGCACGCTTTGAGGAATGAGGAAAGAAAGAAACTGACAAAGTAACGACAGAAGTGTGGAACAACAACTGAATTTCTCATTATTTCAATGAAAAGGCTTGTTTTCATTTAAAAAAAGGGAGCGGGTGGGATGAAAATATGTATGTATGTATTGAACATATTTTGTAGAATACTTTCACTCATCTTATTCATTAACAAAGAGTGATATTTATAATATTCTGTACAGATGCAGTTGATAACTAAAATATAACAAGATGAAGAACTGTTACTAACAGTAGAAACTAACTTTTAATAATATTACTTCTAATAGTAAGATTTTGTAGGTAGCGTTTGATTTTTGAAGAATGTTTGGGTAAATCTTTTCTTCAGTTTGAGAGAACAGTAATACATTGAGTGTATGTTATATTAACTGAATCATGATGGATTGTGTTGGAAACTGGAGGAGTATCACTTTCACAGTAAGAGAGAAACACAAACACCAATTATTTGAGATCATCATTGTTTAAGGCTTGTTTGGAATGACTTTCTACAACTTAGTTTGACTACTAGGCTTTTAAAAGTGTCTATAAAGGTCTAGAGAATAAAGTAGTGCAAAGTACTTATTGGCTCACTTCAATGAAAGTTGTTTCAATAGAAAAGAAAAAGTACTTATTGGCACACTCACTATATGGATATGATGGATTGATAGACAGAGAGCTAGCAAGCAAGTTGTGGGTCTTTAGAGAAGGATAGAGAGGGAGAGGGAGTGAGTGCATGGTGGGACTTGCAAGATGAAAGCACTTTTTAGTGGAATACAAAAGTGATAAAATCCATAGTGTTAGTGAGATGACAAGCTTGAATAGTGGTGGAGGCTGCCTATCACGCTTAAAAAGTTTGAAAGCAAGGTCCTTTCACTCTTTTTTACCTACCATGTATAAATTAGTCTTTTTTTTAATTAATTTTTTTCTTCTTGTTTTTCTTCACAAAGTAATGCAGCGAGAATGGTTCATTGAGAATACCATCATGGGTAAATCTTTGGTTGAAGTGATCCTTTTGAACTAGTAGTAAAAAGAAGACAGTTTTAATAAATGGCTAAGAGGTCAAGAGTTCAATTCAGACTGGTCTCTTACTTAGAAATTAATTTCTTACGAGTTTTCTTGGCACCAAAATGTTGTAGAGTCAAGTGAGTTGTCTTTAAGCAAAATAATTGAGAATGAGAATAGAGTTACATCTTGGGATACAGCAAATATTACTGTTTAAGAAATATGGAAAGAAAAATAGTTAGGTGCTGCTTGGGCTCCAACTATGCAGTGAAGCCCAGGCATATGCCATATAAAAAACTGCCTTGTGGTATTTTTTATATATTTATATATATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATATTTTTTTTTTTTTTTGTATGTTTAGAAGATGGGGGAGTATGGGTTTGGTGCAGCCTAATCATGGCTCTTAAGATAAAATTATTGCTTTTGAATACAAGCTAGCCAAGCCCAAATTCAGTTCATGTCTTGTTTATATCCTGTGAAGTCTAAACTAGATAATATATTAATGGTTTGGATGATCATATTGCTTGACTATAATGCACTTTTCATCTCTTTTCTACTTCAATATGGAATAGAGTAATAAAAATTGTTCTTGGGAACTATTCTTATCATTGGATGTGTTGTGGTGTTGGACGAACAATACTTACTGTCAACTGTAGATAAGATAATAATTGTATACTTTCTTTCCGTGGACTAATAATTATTAACACCAGGTTCTTGAGTTATTATTTTCTATTTTTACTTTTTAGGTGCTTGTATGAAGAGCCTCGAAGGCTTGAATTGAACACTGGTTTTCGTGCTTCTTAAAATCTTTCCTTCAATTATTGAATTTTGAAAGTAGTTTTATAAGAGATAAACTTGTTTGCATTTAATTACAATGATACCGTCTTGTTTTGTCATCTATCCTGCAGTTCTGTTGCTAATGTTCAACAAAGCAGCTCTTTCTTCTTACAACTTTCCATGTGCTAATGTCATCACTCTTTTCCAGGTAGAAGATCTACTGATTCCTAATGGAATAAACTATATTCCCTTTTTAGTAAATATCACAGTTTACATTCTTCAGATTATGTGTTCATGCACACTTCTATATGCATTGCGCCGTTGGAAGATTATCTCTTTCACAGTGACTGGTGAATCTCAAAGCGTCAGTGTTGGAAGGTCAATGATCCTTGTACCTTTCAGAACTTTGGTTAAAACACTTCCTCTCGCCTTATCATATTTGTTTTACATGGTATGTATCTTATGATATGTTTTATTTGTCCCAAGCAAAATATTAATCTCTTGCAAAATCTACTTACAAATTTTTCCCTGATAAAGGTTGTAACTATGGAATCTGTTCGTGGGATCAATGTTCCAATGTATACAACATTGAGGAGAACTACTGTAGCATTTACAATGATTGCTGAGTACTTGTTGACTGGCCAGACTCATTCACCTTTTGTTGTTACGAGGTAGGCAAGCATGGTGTTGGGAAAAGCCTCCTACTACTACTGCAGGGCCAAACAGAACAACTAAAAGAAAACTAACGAAAATAAAAAACACAAGGATTTACATGGAAAACTCCATACTCGGAGAAAAACCATGGCCCACTAGAAAAAAATCTACTATGCGAAAAATTGTTATAATCACACAGAATAATTCACCTCAATGTAAATTACAAGAGCACTCTCTCAAAACTTTTATACTACTCGCCTTTAACTTTAATCTCAAACTAGATAATACAAAAGAGAATTTAAAGATTAACACACCCAACTTATAGCATTTCTAACAAGGACCATTCAAAACCAAAGTTATAGGCTCCTTATGTAGTGTTTGGAGCCTATTACTTCCTTGAACTTTTCTGACGTGGATAGCTGGACTTTTAATATTATGCCAAAACTCATCTCATGGTGTATACATTTCTCTTCTTGTTTTTCTTTTTCTACTGTGAATTTGATGAATATCTGGATCTCTTTCCTAGCTAAGAGAGTTAACAGTATTAAATGAATAAGAAAGTAGCATGGCAGTGAACTGAAGGTTTCACATTCATAAGTTTTTTGGCAATGCTAATTCATTTCCTACCTGAAAAATTTAAGGATTCATCAGTGTGGGGATGATTATACTTGGCGCAGTGGTGGCTGGATCCAGGGATTTGTCATTTGATACCTACTCCTATGCTGTGGTCTTCGTTGCAAATATATGTACTGCTCTATATCTTGCCTCTATTGCTCGTATAGGTAATGATTATGAACTTCCTTTTCTCATCTACTTAATGTTGAAGTTGTGACCCATTTTGTTTGACACTGTGTAAGTACTTCCAGGGAAATCCAGTGGTTTGAATACCTTTGGCCTTATGTGGTGCAATGGTTAGAGGATTTTTTTCTATTGATTTACTTTTTGAATAATTCTTTCATTGTTCTGACAAGCTTTAGTTTTGTATTCATCTTCATAGGGGTAATATGTGGGCCTCTTTTGTTACTCTGGATAACAATCAGGGGAGATGTCGAAACAACATTAAATTTCCGTTACTTATTTTCAATTGGCTTCCAGGTATCTCTTCATATTGTGTTTCTCAATGCTCGCCTACTTGAACAATCAGTGCTTGCTTTGACTTTGATGGGTGAAACAATTCTCATGCTTGTTTAATTTCTTAAACTTCTAACCATTAATCATGCTTTGCAGTGTGTGATGCTTCTCTCCTGTATAATGGCTTTCTTGATCAACTACTTTGTATTTCTAAATACAACTCTCAATTCAGCACTGACACAAACAGTCTGTGGTAATTTGAAGGTGAGCAATGCTTAGTTCCTAAATCTTCTTTTGCTATGTGGAACACAAATAATCTTTTAACGATCTTTTCGGATGCATATTAACAGTTTGTTCAGAATAACTTTTCGAGTTTTAAGCACATAAAAACACTTTTTTAAACACTTGAAAGGTACCAAACAAGCACTAAAACTCCAGTTTGGCCAATACCGTCCGTTAAAATGGTATTGTGCCTTTACTAAAACAAAACTATTTCCCTTATTGAATTAGTTGGAATGGAAGGACACAAAGGCAAATGTTTTTCCCTTTTTCCTTAGCCAGATTTTGAGACTTTATTGTGTATAGATGCATACGATATGATCGTTTATATTCGTTTCTCAACTTATGAACGGTCAATTGTAGGATGTTTTTAGCATTGGGGTTGGCTGGTTTCTGTTCGGCGGACTTCCCTATGATTTTGTAAGCCAATATCTTTTACTTTGAAGACTTTGATCTGCATCTTTTGTTTTTGTTTTTGGTTAACTTGTCAGTTTTTTCTTCTGGTGTCTTTTTTTAGATCAATATTGTTGGGCAGTCATTTGGCTTCATGGGATCTTGCTTGTATGCCTATTGCAAGCTTCATGGGAAATAAGATATCAAGATGAGGCTGCCTTCTATGCTTTGGACTCATCTCTTATATACAAAAGAAAAAGAATGTAGGTTAATATATTGTGCTGACTTCTGC ATGGCGTTCGCCGAGAGAATTGAGACGAAGAACACGCTGCTTCCACTTCTTCATAAGCAAGTAGGAAATGATGAGCTGAAACCACCAACAGCTGGATCCACCATGACTAAGAAAGGAGCTTATGCTGCTATTTCTTATATGGCTTCCGCTGTTCTGTTGCTAATGTTCAACAAAGCAGCTCTTTCTTCTTACAACTTTCCATGTGCTAATGTCATCACTCTTTTCCAGATTATGTGTTCATGCACACTTCTATATGCATTGCGCCGTTGGAAGATTATCTCTTTCACAGTGACTGGTGAATCTCAAAGCGTCAGTGTTGGAAGGTCAATGATCCTTGTACCTTTCAGAACTTTGGTTAAAACACTTCCTCTCGCCTTATCATATTTGTTTTACATGGTTGTAACTATGGAATCTGTTCGTGGGATCAATGTTCCAATGTATACAACATTGAGGAGAACTACTGTAGCATTTACAATGATTGCTGAGTACTTGTTGACTGGCCAGACTCATTCACCTTTTGTTGTTACGAGTGTGGGGATGATTATACTTGGCGCAGTGGTGGCTGGATCCAGGGATTTGTCATTTGATACCTACTCCTATGCTGTGGTCTTCGTTGCAAATATATGTACTGCTCTATATCTTGCCTCTATTGCTCGTATAGGGAAATCCAGTGGTTTGAATACCTTTGGCCTTATGTGGTGCAATGGGGTAATATGTGGGCCTCTTTTGTTACTCTGGATAACAATCAGGGGAGATGTCGAAACAACATTAAATTTCCGTTACTTATTTTCAATTGGCTTCCAGTGTGTGATGCTTCTCTCCTGTATAATGGCTTTCTTGATCAACTACTTTGTATTTCTAAATACAACTCTCAATTCAGCACTGACACAAACAGTCTGTGGTAATTTGAAGGATGTTTTTAGCATTGGGGTTGGCTGGTTTCTGTTCGGCGGACTTCCCTATGATTTTATCAATATTGTTGGGCAGTCATTTGGCTTCATGGGATCTTGCTTGTATGCCTATTGCAAGCTTCATGGGAAATAA ATGGCGTTCGCCGAGAGAATTGAGACGAAGAACACGCTGCTTCCACTTCTTCATAAGCAAGTAGGAAATGATGAGCTGAAACCACCAACAGCTGGATCCACCATGACTAAGAAAGGAGCTTATGCTGCTATTTCTTATATGGCTTCCGCTGTTCTGTTGCTAATGTTCAACAAAGCAGCTCTTTCTTCTTACAACTTTCCATGTGCTAATGTCATCACTCTTTTCCAGATTATGTGTTCATGCACACTTCTATATGCATTGCGCCGTTGGAAGATTATCTCTTTCACAGTGACTGGTGAATCTCAAAGCGTCAGTGTTGGAAGGTCAATGATCCTTGTACCTTTCAGAACTTTGGTTAAAACACTTCCTCTCGCCTTATCATATTTGTTTTACATGGTTGTAACTATGGAATCTGTTCGTGGGATCAATGTTCCAATGTATACAACATTGAGGAGAACTACTGTAGCATTTACAATGATTGCTGAGTACTTGTTGACTGGCCAGACTCATTCACCTTTTGTTGTTACGAGTGTGGGGATGATTATACTTGGCGCAGTGGTGGCTGGATCCAGGGATTTGTCATTTGATACCTACTCCTATGCTGTGGTCTTCGTTGCAAATATATGTACTGCTCTATATCTTGCCTCTATTGCTCGTATAGGGAAATCCAGTGGTTTGAATACCTTTGGCCTTATGTGGTGCAATGGGGTAATATGTGGGCCTCTTTTGTTACTCTGGATAACAATCAGGGGAGATGTCGAAACAACATTAAATTTCCGTTACTTATTTTCAATTGGCTTCCAGTGTGTGATGCTTCTCTCCTGTATAATGGCTTTCTTGATCAACTACTTTGTATTTCTAAATACAACTCTCAATTCAGCACTGACACAAACAGTCTGTGGTAATTTGAAGGATGTTTTTAGCATTGGGGTTGGCTGGTTTCTGTTCGGCGGACTTCCCTATGATTTTATCAATATTGTTGGGCAGTCATTTGGCTTCATGGGATCTTGCTTGTATGCCTATTGCAAGCTTCATGGGAAATAA MAFAERIETKNTLLPLLHKQVGNDELKPPTAGSTMTKKGAYAAISYMASAVLLLMFNKAALSSYNFPCANVITLFQIMCSCTLLYALRRWKIISFTVTGESQSVSVGRSMILVPFRTLVKTLPLALSYLFYMVVTMESVRGINVPMYTTLRRTTVAFTMIAEYLLTGQTHSPFVVTSVGMIILGAVVAGSRDLSFDTYSYAVVFVANICTALYLASIARIGKSSGLNTFGLMWCNGVICGPLLLLWITIRGDVETTLNFRYLFSIGFQCVMLLSCIMAFLINYFVFLNTTLNSALTQTVCGNLKDVFSIGVGWFLFGGLPYDFINIVGQSFGFMGSCLYAYCKLHGK*
BLAST of Csa2G008030 vs. Swiss-Prot
Match: Y8631_DICDI (Putative UDP-sugar transporter DDB_G0278631 OS=Dictyostelium discoideum GN=DDB_G0278631 PE=3 SV=2) HSP 1 Score: 155.6 bits (392), Expect = 9.9e-37 Identity = 80/307 (26.06%), Postives = 166/307 (54.07%), Query Frame = 1
BLAST of Csa2G008030 vs. Swiss-Prot
Match: SQV7_CAEEL (UDP-sugar transporter sqv-7 OS=Caenorhabditis elegans GN=sqv-7 PE=1 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 9.2e-35 Identity = 97/309 (31.39%), Postives = 151/309 (48.87%), Query Frame = 1
BLAST of Csa2G008030 vs. Swiss-Prot
Match: US74C_DROME (UDP-sugar transporter UST74c OS=Drosophila melanogaster GN=frc PE=1 SV=2) HSP 1 Score: 140.2 bits (352), Expect = 4.3e-32 Identity = 92/315 (29.21%), Postives = 151/315 (47.94%), Query Frame = 1
BLAST of Csa2G008030 vs. Swiss-Prot
Match: S35D2_PIG (UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter (Fragment) OS=Sus scrofa GN=SLC35D2 PE=2 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.2e-31 Identity = 91/302 (30.13%), Postives = 152/302 (50.33%), Query Frame = 1
BLAST of Csa2G008030 vs. Swiss-Prot
Match: S35D1_HUMAN (UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter OS=Homo sapiens GN=SLC35D1 PE=1 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.6e-31 Identity = 91/302 (30.13%), Postives = 151/302 (50.00%), Query Frame = 1
BLAST of Csa2G008030 vs. TrEMBL
Match: A0A0A0LF96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G008030 PE=4 SV=1) HSP 1 Score: 692.6 bits (1786), Expect = 2.5e-196 Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 1
BLAST of Csa2G008030 vs. TrEMBL
Match: A0A0A0LJ02_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G007950 PE=4 SV=1) HSP 1 Score: 574.3 bits (1479), Expect = 9.9e-161 Identity = 288/348 (82.76%), Postives = 313/348 (89.94%), Query Frame = 1
BLAST of Csa2G008030 vs. TrEMBL
Match: B9IMV7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s12750g PE=4 SV=1) HSP 1 Score: 491.5 bits (1264), Expect = 8.4e-136 Identity = 245/316 (77.53%), Postives = 276/316 (87.34%), Query Frame = 1
BLAST of Csa2G008030 vs. TrEMBL
Match: A0A061GNP9_THECC (Nucleotide/sugar transporter family protein isoform 1 OS=Theobroma cacao GN=TCM_038133 PE=4 SV=1) HSP 1 Score: 486.1 bits (1250), Expect = 3.5e-134 Identity = 241/340 (70.88%), Postives = 284/340 (83.53%), Query Frame = 1
BLAST of Csa2G008030 vs. TrEMBL
Match: V4UUM3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008844mg PE=4 SV=1) HSP 1 Score: 483.8 bits (1244), Expect = 1.8e-133 Identity = 240/328 (73.17%), Postives = 274/328 (83.54%), Query Frame = 1
BLAST of Csa2G008030 vs. TAIR10
Match: AT4G32272.2 (AT4G32272.2 Nucleotide/sugar transporter family protein) HSP 1 Score: 420.2 bits (1079), Expect = 1.2e-117 Identity = 205/331 (61.93%), Postives = 258/331 (77.95%), Query Frame = 1
BLAST of Csa2G008030 vs. TAIR10
Match: AT4G31600.1 (AT4G31600.1 UDP-N-acetylglucosamine (UAA) transporter family) HSP 1 Score: 126.3 bits (316), Expect = 3.6e-29 Identity = 83/308 (26.95%), Postives = 146/308 (47.40%), Query Frame = 1
BLAST of Csa2G008030 vs. TAIR10
Match: AT2G13650.1 (AT2G13650.1 golgi nucleotide sugar transporter 1) HSP 1 Score: 84.7 bits (208), Expect = 1.2e-16 Identity = 71/313 (22.68%), Postives = 129/313 (41.21%), Query Frame = 1
BLAST of Csa2G008030 vs. NCBI nr
Match: gi|449443047|ref|XP_004139292.1| (PREDICTED: UDP-sugar transporter sqv-7 isoform X1 [Cucumis sativus]) HSP 1 Score: 692.6 bits (1786), Expect = 3.6e-196 Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 1
BLAST of Csa2G008030 vs. NCBI nr
Match: gi|659070882|ref|XP_008457090.1| (PREDICTED: UDP-sugar transporter sqv-7-like isoform X2 [Cucumis melo]) HSP 1 Score: 669.5 bits (1726), Expect = 3.2e-189 Identity = 333/347 (95.97%), Postives = 338/347 (97.41%), Query Frame = 1
BLAST of Csa2G008030 vs. NCBI nr
Match: gi|659070880|ref|XP_008457083.1| (PREDICTED: UDP-sugar transporter sqv-7-like isoform X1 [Cucumis melo]) HSP 1 Score: 664.1 bits (1712), Expect = 1.4e-187 Identity = 333/350 (95.14%), Postives = 338/350 (96.57%), Query Frame = 1
BLAST of Csa2G008030 vs. NCBI nr
Match: gi|778666199|ref|XP_011648702.1| (PREDICTED: putative UDP-sugar transporter DDB_G0278631 isoform X2 [Cucumis sativus]) HSP 1 Score: 589.0 bits (1517), Expect = 5.6e-165 Identity = 296/299 (99.00%), Postives = 296/299 (99.00%), Query Frame = 1
BLAST of Csa2G008030 vs. NCBI nr
Match: gi|778666202|ref|XP_011648703.1| (PREDICTED: putative UDP-sugar transporter DDB_G0278631 isoform X3 [Cucumis sativus]) HSP 1 Score: 584.3 bits (1505), Expect = 1.4e-163 Identity = 293/296 (98.99%), Postives = 293/296 (98.99%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |