Csa2G003620 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G003620
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 700211 .. 700507 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGAGTGCAAGTTTGTGGATGGGAACGAAGAATTTCTCGGAAAAATATCGGAAATTTTCGCTGAAATTTTGTTTCACGTGATATATCATGTGCAAAGGTATGCTTTTCCACGTGTAGAGTCCTCATTGGTTTGACCGGATGTTTAGTCTTACATATAGATTCTATTGGTCGCTGATTGCCTACCTAACTCGAATGGATGTGAGTTGAAGCATGGGATTATTCCTCGTTCATACGTTCAATTGCTTAATCAAAAACGTGGAAGTGATAACGAAATTGTCTTCGCTTTCGCATGA

mRNA sequence

ATGGCCGAGTGCAAGTTTGTGGATGGGAACGAAGAATTTCTCGGAAAAATATCGGAAATTTTCGCTGAAATTTTGTTTCACATTCTATTGGTCGCTGATTGCCTACCTAACTCGAATGGATGTGAGTTGAAGCATGGGATTATTCCTCGTTCATACGTTCAATTGCTTAATCAAAAACGTGGAAGTGATAACGAAATTGTCTTCGCTTTCGCATGA

Coding sequence (CDS)

ATGGCCGAGTGCAAGTTTGTGGATGGGAACGAAGAATTTCTCGGAAAAATATCGGAAATTTTCGCTGAAATTTTGTTTCACATTCTATTGGTCGCTGATTGCCTACCTAACTCGAATGGATGTGAGTTGAAGCATGGGATTATTCCTCGTTCATACGTTCAATTGCTTAATCAAAAACGTGGAAGTGATAACGAAATTGTCTTCGCTTTCGCATGA

Protein sequence

MAECKFVDGNEEFLGKISEIFAEILFHILLVADCLPNSNGCELKHGIIPRSYVQLLNQKRGSDNEIVFAFA*
Homology
[Close]
BLAST of Csa2G003620 vs. TrEMBL
Match: A0A0A0LF11_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G003620 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 8.1e-33
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1 

Query: 1  MAECKFVDGNEEFLGKISEIFAEILFHILLVADCLPNSNGCELKHGIIPRSYVQLLNQKR 60
          MAECKFVDGNEEFLGKISEIFAEILFHILLVADCLPNSNGCELKHGIIPRSYVQLLNQKR
Sbjct: 1  MAECKFVDGNEEFLGKISEIFAEILFHILLVADCLPNSNGCELKHGIIPRSYVQLLNQKR 60

Query: 61 GSDNEIVFAFA 72
          GSDNEIVFAFA
Sbjct: 61 GSDNEIVFAFA 71

[Close]
BLAST of Csa2G003620 vs. NCBI nr
Match: gi|700205491|gb|KGN60610.1| (hypothetical protein Csa_2G003620 [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-32
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1 

Query: 1  MAECKFVDGNEEFLGKISEIFAEILFHILLVADCLPNSNGCELKHGIIPRSYVQLLNQKR 60
          MAECKFVDGNEEFLGKISEIFAEILFHILLVADCLPNSNGCELKHGIIPRSYVQLLNQKR
Sbjct: 1  MAECKFVDGNEEFLGKISEIFAEILFHILLVADCLPNSNGCELKHGIIPRSYVQLLNQKR 60

Query: 61 GSDNEIVFAFA 72
          GSDNEIVFAFA
Sbjct: 61 GSDNEIVFAFA 71

The following BLAST results are available for this feature:
BLAST of Csa2G003620 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LF11_CUCSA8.1e-33100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G003620 PE=4 SV=1[more]
BLAST of Csa2G003620 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700205491|gb|KGN60610.1|1.2e-32100.00hypothetical protein Csa_2G003620 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU171960cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G003620.1Csa2G003620.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU171960CU171960transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G003620Watermelon (97103) v2cuwmbB103
Csa2G003620Watermelon (97103) v2cuwmbB149
Csa2G003620Watermelon (97103) v2cuwmbB156
Csa2G003620Wax gourdcuwgoB131
Csa2G003620Wax gourdcuwgoB144
Csa2G003620Wax gourdcuwgoB214
Csa2G003620Cucumber (Gy14) v1cgycuB150
Csa2G003620Cucurbita maxima (Rimu)cmacuB075
Csa2G003620Cucurbita maxima (Rimu)cmacuB119
Csa2G003620Cucurbita maxima (Rimu)cmacuB173
Csa2G003620Cucurbita maxima (Rimu)cmacuB791
Csa2G003620Cucurbita moschata (Rifu)cmocuB065
Csa2G003620Cucurbita moschata (Rifu)cmocuB105
Csa2G003620Cucurbita moschata (Rifu)cmocuB157
Csa2G003620Cucurbita moschata (Rifu)cmocuB783
Csa2G003620Melon (DHL92) v3.5.1cumeB129
Csa2G003620Melon (DHL92) v3.5.1cumeB140
Csa2G003620Watermelon (Charleston Gray)cuwcgB096
Csa2G003620Watermelon (Charleston Gray)cuwcgB156
Csa2G003620Watermelon (Charleston Gray)cuwcgB163
Csa2G003620Watermelon (97103) v1cuwmB119
Csa2G003620Watermelon (97103) v1cuwmB162
Csa2G003620Watermelon (97103) v1cuwmB174
Csa2G003620Cucurbita pepo (Zucchini)cpecuB103
Csa2G003620Cucurbita pepo (Zucchini)cpecuB370
Csa2G003620Cucurbita pepo (Zucchini)cpecuB662
Csa2G003620Cucurbita pepo (Zucchini)cpecuB821
Csa2G003620Bottle gourd (USVL1VR-Ls)culsiB098
Csa2G003620Bottle gourd (USVL1VR-Ls)culsiB131
Csa2G003620Cucumber (Gy14) v2cgybcuB056
Csa2G003620Melon (DHL92) v3.6.1cumedB109
Csa2G003620Melon (DHL92) v3.6.1cumedB133
Csa2G003620Silver-seed gourdcarcuB0042
Csa2G003620Silver-seed gourdcarcuB0139
Csa2G003620Silver-seed gourdcarcuB0217
Csa2G003620Silver-seed gourdcarcuB0598
Csa2G003620Silver-seed gourdcarcuB0914