Csa2G000850 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G000850
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionHexokinase 1
LocationChr2 : 481541 .. 482003 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATGGGGTAACTTCCGGTCCTCGCACTTATCACTTACAGAATATGATCATGCATTGGATGCTGAGAGTTTAAACCTTGGAGAACAGGTAAAACCATTCTTAGAGGGTATTAAAGTAATTAGATTATTTTTAGGTAGATATTATTCTATATTATTTCCTTAACTGTATTTCTCTTTGGTTATATATAAGTTTGTACTCTACTAAATTATCAATGAAATAGAGATTTATTCCATAGAAAACAACATGGTATCAGAGCCTTGTCTCTTTTGAATTCAAGTCACCACATCCCGTTCTCTGCCTCCGTTGATCATTCATCGACGGAGGTAGAACCCTCCTCAATGTTTCAAATCCATTTTTGTTCTTGGTGCAGAACCATCCGCTGCCTCTCCTCTTCGTTCTTCGCCCAAGAAGTGAAACCAAAACCCATTTCCTCTCTCAAAACGCCGCTCAGCCTCGCTAG

mRNA sequence

ATGGAATGGGGTAACTTCCGGTCCTCGCACTTATCACTTACAGAATATGATCATGCATTGGATGCTGAGAGTTTAAACCTTGGAGAACAGAACCATCCGCTGCCTCTCCTCTTCGTTCTTCGCCCAAGAAGTGAAACCAAAACCCATTTCCTCTCTCAAAACGCCGCTCAGCCTCGCTAG

Coding sequence (CDS)

ATGGAATGGGGTAACTTCCGGTCCTCGCACTTATCACTTACAGAATATGATCATGCATTGGATGCTGAGAGTTTAAACCTTGGAGAACAGAACCATCCGCTGCCTCTCCTCTTCGTTCTTCGCCCAAGAAGTGAAACCAAAACCCATTTCCTCTCTCAAAACGCCGCTCAGCCTCGCTAG

Protein sequence

MEWGNFRSSHLSLTEYDHALDAESLNLGEQNHPLPLLFVLRPRSETKTHFLSQNAAQPR*
Homology
[Close]
BLAST of Csa2G000850 vs. Swiss-Prot
Match: HXK2_ARATH (Hexokinase-2 OS=Arabidopsis thaliana GN=HXK2 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 4.8e-08
Identity = 25/30 (83.33%), Postives = 25/30 (83.33%), Query Frame = 1 

Query: 1   MEWGNFRSSHLSLTEYDHALDAESLNLGEQ 31
           MEWGNFRSSHL LTEYDH+LD +SLN GEQ
Sbjct: 283 MEWGNFRSSHLPLTEYDHSLDVDSLNPGEQ 312

[Close]
BLAST of Csa2G000850 vs. Swiss-Prot
Match: HXK2_SOLTU (Hexokinase-2 OS=Solanum tuberosum GN=HXK2 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 6.3e-08
Identity = 25/30 (83.33%), Postives = 24/30 (80.00%), Query Frame = 1 

Query: 1   MEWGNFRSSHLSLTEYDHALDAESLNLGEQ 31
           MEWGNFRSSHL LTEYDHA+D  SLN GEQ
Sbjct: 283 MEWGNFRSSHLPLTEYDHAMDTNSLNPGEQ 312

[Close]
BLAST of Csa2G000850 vs. Swiss-Prot
Match: HXK1_SOLTU (Hexokinase-1 OS=Solanum tuberosum GN=HXK1 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 8.2e-08
Identity = 26/30 (86.67%), Postives = 24/30 (80.00%), Query Frame = 1 

Query: 1   MEWGNFRSSHLSLTEYDHALDAESLNLGEQ 31
           MEWGNFRSSHL LTEYDHALD ESLN  EQ
Sbjct: 283 MEWGNFRSSHLPLTEYDHALDNESLNPAEQ 312

[Close]
BLAST of Csa2G000850 vs. Swiss-Prot
Match: HXK2_ORYSJ (Hexokinase-2 OS=Oryza sativa subsp. japonica GN=HXK2 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 8.2e-08
Identity = 26/30 (86.67%), Postives = 25/30 (83.33%), Query Frame = 1 

Query: 1   MEWGNFRSSHLSLTEYDHALDAESLNLGEQ 31
           MEWGNFRSSHL LTE+D ALDAESLN GEQ
Sbjct: 280 MEWGNFRSSHLPLTEFDQALDAESLNPGEQ 309

[Close]
BLAST of Csa2G000850 vs. Swiss-Prot
Match: HXK1_ARATH (Hexokinase-1 OS=Arabidopsis thaliana GN=HXK1 PE=1 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 1.4e-07
Identity = 25/30 (83.33%), Postives = 24/30 (80.00%), Query Frame = 1 

Query: 1   MEWGNFRSSHLSLTEYDHALDAESLNLGEQ 31
           MEWGNFRSSHL LTE+DH LD ESLN GEQ
Sbjct: 283 MEWGNFRSSHLPLTEFDHTLDFESLNPGEQ 312

[Close]
BLAST of Csa2G000850 vs. TrEMBL
Match: A0A0A0LFU1_CUCSA (Phosphotransferase OS=Cucumis sativus GN=Csa_2G000850 PE=3 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.7e-26
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1 

Query: 1  MEWGNFRSSHLSLTEYDHALDAESLNLGEQNHPLPLLFVLRPRSETKTHFLSQNAAQPR 60
          MEWGNFRSSHLSLTEYDHALDAESLNLGEQNHPLPLLFVLRPRSETKTHFLSQNAAQPR
Sbjct: 1  MEWGNFRSSHLSLTEYDHALDAESLNLGEQNHPLPLLFVLRPRSETKTHFLSQNAAQPR 59

[Close]
BLAST of Csa2G000850 vs. TrEMBL
Match: A0A0A0LKR1_CUCSA (Phosphotransferase OS=Cucumis sativus GN=Csa_2G000830 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 9.8e-08
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1 

Query: 1   MEWGNFRSSHLSLTEYDHALDAESLNLGEQ 31
           MEWGNFRSSHLSLTEYDHALDAESLN GEQ
Sbjct: 283 MEWGNFRSSHLSLTEYDHALDAESLNPGEQ 312

[Close]
BLAST of Csa2G000850 vs. TrEMBL
Match: B6V3C0_CUCME (Phosphotransferase OS=Cucumis melo PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 9.8e-08
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1 

Query: 1   MEWGNFRSSHLSLTEYDHALDAESLNLGEQ 31
           MEWGNFRSSHLSLTEYDHALDAESLN GEQ
Sbjct: 283 MEWGNFRSSHLSLTEYDHALDAESLNPGEQ 312

[Close]
BLAST of Csa2G000850 vs. TrEMBL
Match: I1J4I1_SOYBN (Phosphotransferase OS=Glycine max GN=GLYMA_01G007200 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 3.7e-07
Identity = 28/30 (93.33%), Postives = 28/30 (93.33%), Query Frame = 1 

Query: 1   MEWGNFRSSHLSLTEYDHALDAESLNLGEQ 31
           MEWGNFRSSHL LTEYDHALDAESLN GEQ
Sbjct: 283 MEWGNFRSSHLPLTEYDHALDAESLNPGEQ 312

[Close]
BLAST of Csa2G000850 vs. TrEMBL
Match: I1J4I2_SOYBN (Phosphotransferase OS=Glycine max GN=GLYMA_01G007200 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 3.7e-07
Identity = 28/30 (93.33%), Postives = 28/30 (93.33%), Query Frame = 1 

Query: 1   MEWGNFRSSHLSLTEYDHALDAESLNLGEQ 31
           MEWGNFRSSHL LTEYDHALDAESLN GEQ
Sbjct: 283 MEWGNFRSSHLPLTEYDHALDAESLNPGEQ 312

[Close]
BLAST of Csa2G000850 vs. TAIR10
Match: AT2G19860.1 (AT2G19860.1 hexokinase 2)

HSP 1 Score: 57.8 bits (138), Expect = 2.7e-09
Identity = 25/30 (83.33%), Postives = 25/30 (83.33%), Query Frame = 1 

Query: 1   MEWGNFRSSHLSLTEYDHALDAESLNLGEQ 31
           MEWGNFRSSHL LTEYDH+LD +SLN GEQ
Sbjct: 283 MEWGNFRSSHLPLTEYDHSLDVDSLNPGEQ 312

[Close]
BLAST of Csa2G000850 vs. TAIR10
Match: AT4G29130.1 (AT4G29130.1 hexokinase 1)

HSP 1 Score: 56.2 bits (134), Expect = 7.9e-09
Identity = 25/30 (83.33%), Postives = 24/30 (80.00%), Query Frame = 1 

Query: 1   MEWGNFRSSHLSLTEYDHALDAESLNLGEQ 31
           MEWGNFRSSHL LTE+DH LD ESLN GEQ
Sbjct: 283 MEWGNFRSSHLPLTEFDHTLDFESLNPGEQ 312

[Close]
BLAST of Csa2G000850 vs. NCBI nr
Match: gi|700205459|gb|KGN60578.1| (hypothetical protein Csa_2G000850 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 3.9e-26
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1 

Query: 1  MEWGNFRSSHLSLTEYDHALDAESLNLGEQNHPLPLLFVLRPRSETKTHFLSQNAAQPR 60
          MEWGNFRSSHLSLTEYDHALDAESLNLGEQNHPLPLLFVLRPRSETKTHFLSQNAAQPR
Sbjct: 1  MEWGNFRSSHLSLTEYDHALDAESLNLGEQNHPLPLLFVLRPRSETKTHFLSQNAAQPR 59

[Close]
BLAST of Csa2G000850 vs. NCBI nr
Match: gi|659071241|ref|XP_008458856.1| (PREDICTED: hexokinase-1-like isoform X2 [Cucumis melo])

HSP 1 Score: 63.5 bits (153), Expect = 1.4e-07
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1 

Query: 1   MEWGNFRSSHLSLTEYDHALDAESLNLGEQ 31
           MEWGNFRSSHLSLTEYDHALDAESLN GEQ
Sbjct: 287 MEWGNFRSSHLSLTEYDHALDAESLNPGEQ 316

[Close]
BLAST of Csa2G000850 vs. NCBI nr
Match: gi|778665758|ref|XP_011648625.1| (PREDICTED: hexokinase-1-like [Cucumis sativus])

HSP 1 Score: 63.5 bits (153), Expect = 1.4e-07
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1 

Query: 1   MEWGNFRSSHLSLTEYDHALDAESLNLGEQ 31
           MEWGNFRSSHLSLTEYDHALDAESLN GEQ
Sbjct: 283 MEWGNFRSSHLSLTEYDHALDAESLNPGEQ 312

[Close]
BLAST of Csa2G000850 vs. NCBI nr
Match: gi|209978718|gb|ACJ04704.1| (hexokinase 1 [Cucumis melo])

HSP 1 Score: 63.5 bits (153), Expect = 1.4e-07
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1 

Query: 1   MEWGNFRSSHLSLTEYDHALDAESLNLGEQ 31
           MEWGNFRSSHLSLTEYDHALDAESLN GEQ
Sbjct: 283 MEWGNFRSSHLSLTEYDHALDAESLNPGEQ 312

[Close]
BLAST of Csa2G000850 vs. NCBI nr
Match: gi|659071245|ref|XP_008458873.1| (PREDICTED: hexokinase-1-like isoform X3 [Cucumis melo])

HSP 1 Score: 63.5 bits (153), Expect = 1.4e-07
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1 

Query: 1   MEWGNFRSSHLSLTEYDHALDAESLNLGEQ 31
           MEWGNFRSSHLSLTEYDHALDAESLN GEQ
Sbjct: 283 MEWGNFRSSHLSLTEYDHALDAESLNPGEQ 312

The following BLAST results are available for this feature:
BLAST of Csa2G000850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HXK2_ARATH4.8e-0883.33Hexokinase-2 OS=Arabidopsis thaliana GN=HXK2 PE=1 SV=1[more]
HXK2_SOLTU6.3e-0883.33Hexokinase-2 OS=Solanum tuberosum GN=HXK2 PE=2 SV=1[more]
HXK1_SOLTU8.2e-0886.67Hexokinase-1 OS=Solanum tuberosum GN=HXK1 PE=1 SV=1[more]
HXK2_ORYSJ8.2e-0886.67Hexokinase-2 OS=Oryza sativa subsp. japonica GN=HXK2 PE=2 SV=1[more]
HXK1_ARATH1.4e-0783.33Hexokinase-1 OS=Arabidopsis thaliana GN=HXK1 PE=1 SV=2[more]
BLAST of Csa2G000850 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFU1_CUCSA2.7e-26100.00Phosphotransferase OS=Cucumis sativus GN=Csa_2G000850 PE=3 SV=1[more]
A0A0A0LKR1_CUCSA9.8e-0896.67Phosphotransferase OS=Cucumis sativus GN=Csa_2G000830 PE=3 SV=1[more]
B6V3C0_CUCME9.8e-0896.67Phosphotransferase OS=Cucumis melo PE=2 SV=1[more]
I1J4I1_SOYBN3.7e-0793.33Phosphotransferase OS=Glycine max GN=GLYMA_01G007200 PE=3 SV=1[more]
I1J4I2_SOYBN3.7e-0793.33Phosphotransferase OS=Glycine max GN=GLYMA_01G007200 PE=3 SV=1[more]
BLAST of Csa2G000850 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G19860.12.7e-0983.33 hexokinase 2[more]
AT4G29130.17.9e-0983.33 hexokinase 1[more]
BLAST of Csa2G000850 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700205459|gb|KGN60578.1|3.9e-26100.00hypothetical protein Csa_2G000850 [Cucumis sativus][more]
gi|659071241|ref|XP_008458856.1|1.4e-0796.67PREDICTED: hexokinase-1-like isoform X2 [Cucumis melo][more]
gi|778665758|ref|XP_011648625.1|1.4e-0796.67PREDICTED: hexokinase-1-like [Cucumis sativus][more]
gi|209978718|gb|ACJ04704.1|1.4e-0796.67hexokinase 1 [Cucumis melo][more]
gi|659071245|ref|XP_008458873.1|1.4e-0796.67PREDICTED: hexokinase-1-like isoform X3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001312Hexokinase
IPR022673Hexokinase_C
Vocabulary: Biological Process
TermDefinition
GO:0001678cellular glucose homeostasis
GO:0005975carbohydrate metabolic process
GO:0046835carbohydrate phosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0004396hexokinase activity
GO:0005524ATP binding
GO:0005536glucose binding
GO:0016773phosphotransferase activity, alcohol group as acceptor
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006040 amino sugar metabolic process
biological_process GO:0006013 mannose metabolic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0046835 carbohydrate phosphorylation
biological_process GO:0005982 starch metabolic process
biological_process GO:0019872 streptomycin biosynthetic process
biological_process GO:0006096 glycolytic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006012 galactose metabolic process
biological_process GO:0006000 fructose metabolic process
biological_process GO:0001678 cellular glucose homeostasis
cellular_component GO:0005575 cellular_component
cellular_component GO:0005623 cell
molecular_function GO:0005524 ATP binding
molecular_function GO:0005536 glucose binding
molecular_function GO:0004396 hexokinase activity
molecular_function GO:0016773 phosphotransferase activity, alcohol group as acceptor
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G000850.1Csa2G000850.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001312HexokinasePANTHERPTHR19443HEXOKINASEcoord: 1..30
score: 2.7
IPR022673Hexokinase, C-terminalPFAMPF03727Hexokinase_2coord: 1..31
score: 3.
NoneNo IPR availableGENE3DG3DSA:3.40.367.20coord: 1..30
score: 1.
NoneNo IPR availablePANTHERPTHR19443:SF26SUBFAMILY NOT NAMEDcoord: 1..30
score: 2.7
NoneNo IPR availableunknownSSF53067Actin-like ATPase domaincoord: 1..31
score: 2.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G000850Cucsa.116670Cucumber (Gy14) v1cgycuB150
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G000850Silver-seed gourdcarcuB0042
Csa2G000850Silver-seed gourdcarcuB0102
Csa2G000850Silver-seed gourdcarcuB0217
Csa2G000850Silver-seed gourdcarcuB0598
Csa2G000850Silver-seed gourdcarcuB0914
Csa2G000850Watermelon (97103) v2cuwmbB103
Csa2G000850Watermelon (97103) v2cuwmbB130
Csa2G000850Watermelon (97103) v2cuwmbB156
Csa2G000850Wax gourdcuwgoB129
Csa2G000850Wax gourdcuwgoB144
Csa2G000850Wax gourdcuwgoB211
Csa2G000850Cucumber (Chinese Long) v2cucuB010
Csa2G000850Cucumber (Gy14) v1cgycuB415
Csa2G000850Cucurbita maxima (Rimu)cmacuB075
Csa2G000850Cucurbita maxima (Rimu)cmacuB119
Csa2G000850Cucurbita maxima (Rimu)cmacuB173
Csa2G000850Cucurbita maxima (Rimu)cmacuB791
Csa2G000850Cucurbita moschata (Rifu)cmocuB065
Csa2G000850Cucurbita moschata (Rifu)cmocuB105
Csa2G000850Cucurbita moschata (Rifu)cmocuB157
Csa2G000850Cucurbita moschata (Rifu)cmocuB783
Csa2G000850Melon (DHL92) v3.5.1cumeB110
Csa2G000850Melon (DHL92) v3.5.1cumeB129
Csa2G000850Melon (DHL92) v3.5.1cumeB140
Csa2G000850Watermelon (Charleston Gray)cuwcgB096
Csa2G000850Watermelon (Charleston Gray)cuwcgB134
Csa2G000850Watermelon (Charleston Gray)cuwcgB163
Csa2G000850Watermelon (97103) v1cuwmB114
Csa2G000850Watermelon (97103) v1cuwmB119
Csa2G000850Watermelon (97103) v1cuwmB162
Csa2G000850Cucurbita pepo (Zucchini)cpecuB103
Csa2G000850Cucurbita pepo (Zucchini)cpecuB370
Csa2G000850Cucurbita pepo (Zucchini)cpecuB662
Csa2G000850Cucurbita pepo (Zucchini)cpecuB821
Csa2G000850Bottle gourd (USVL1VR-Ls)culsiB098
Csa2G000850Bottle gourd (USVL1VR-Ls)culsiB134
Csa2G000850Bottle gourd (USVL1VR-Ls)culsiB139
Csa2G000850Cucumber (Gy14) v2cgybcuB019
Csa2G000850Cucumber (Gy14) v2cgybcuB056
Csa2G000850Melon (DHL92) v3.6.1cumedB106
Csa2G000850Melon (DHL92) v3.6.1cumedB133