Csa2G000820 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G000820
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 469431 .. 470407 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCTGGGTCAAACTTATCTTCTTGTATTTGTTCGTAAACTTCGGCGCAGCCCTCATCCACTGGGCTTGCTTCGAAATGGAACGGAAAGTTCCGATGCCGCGAAACGACCGGGAAATTATGGCGCCTTCGTCTCAGATCAAGCGGCGGAAAATCGATCATCCTCCGTCGCGCCGGTAATTCTTGCATCTCCTTCACGACCACTGCCGTCGTGAAAATTGACAATCTTTTTGTTGTTCGCCTCAGTTTATTTTTCCTTGCCGTGGGCCGTTAACGATGAAGCTCCAGGGATGTGTGGGTTTTACTATTTTGAAGGTTGGGATTACGACGTAGATGTTAGTTACCGCTAATAGTTTGTTAGGCTATTGAAGAGACTGAAATGAACTTTAACAATCTTCAATCGTTGAGGTCTCTTAGGTTTGTAGCTGTTAGTTTGAGAAATAGAGTTGATTTGAAGGATAGAATGAAATTAAGTAGTGTGGAATTTTGATATGTTCCTTTTGGATGATTGTATCAACTTCTGGTTTGGATTGCATCTTTGTAATTGATTTATTTGACAATGAAATAAAAGATTAAAAAAACATCGGAATTTTGTATTAGTTGCTTTAATAATTCTGAGTTGAGTTCATTCGTAAGACTTCTCTATTGCAGATCTTCATCTTCAGCTGCTGTAGAGAGACATGGAGTTTTAGCATCAACTAAAGGCTCAACTGTGAGAACTTTCATTTCTTTGGTCTTGCCTTCACAGTAAATTATCATGATTATTTATCAAGCATTAGCTTATAATTACGATGACTTTGAATTTACACAGTTCCCTGTTGCTAGTGGGAGTGAATTTCGGATGCTACAGGATAAGAGTTCTGCCATAGCAGAGGCCAAACAAGATGGTTGCACTGGTAATTTTAAGGTCCTTGATTCTCCATTTGGAAATTTTCTTTTACCTGTTATTCCTTCTTCCACGGAATTCTTTGAATAG

mRNA sequence

ATGGGCCTGGGTCAAACTTATCTTCTTGTATTTGTTCGTAAACTTCGGCGCAGCCCTCATCCACTGGGCTTGCTTCGAAATGGAACGGAAAGTTCCGATGCCGCGAAACGACCGGGAAATTATGGCGCCTTCGTCTCAGATCAAGCGGCGGAAAATCGATCATCCTCCGTCGCGCCGGCTATTGAAGAGACTGAAATGAACTTTAACAATCTTCAATCGTTGAGGTCTCTTAGATCTTCATCTTCAGCTGCTGTAGAGAGACATGGAGTTTTAGCATCAACTAAAGGCTCAACTTTCCCTGTTGCTAGTGGGAGTGAATTTCGGATGCTACAGGATAAGAGTTCTGCCATAGCAGAGGCCAAACAAGATGGTTGCACTGGTAATTTTAAGGTCCTTGATTCTCCATTTGGAAATTTTCTTTTACCTGTTATTCCTTCTTCCACGGAATTCTTTGAATAG

Coding sequence (CDS)

ATGGGCCTGGGTCAAACTTATCTTCTTGTATTTGTTCGTAAACTTCGGCGCAGCCCTCATCCACTGGGCTTGCTTCGAAATGGAACGGAAAGTTCCGATGCCGCGAAACGACCGGGAAATTATGGCGCCTTCGTCTCAGATCAAGCGGCGGAAAATCGATCATCCTCCGTCGCGCCGGCTATTGAAGAGACTGAAATGAACTTTAACAATCTTCAATCGTTGAGGTCTCTTAGATCTTCATCTTCAGCTGCTGTAGAGAGACATGGAGTTTTAGCATCAACTAAAGGCTCAACTTTCCCTGTTGCTAGTGGGAGTGAATTTCGGATGCTACAGGATAAGAGTTCTGCCATAGCAGAGGCCAAACAAGATGGTTGCACTGGTAATTTTAAGGTCCTTGATTCTCCATTTGGAAATTTTCTTTTACCTGTTATTCCTTCTTCCACGGAATTCTTTGAATAG

Protein sequence

MGLGQTYLLVFVRKLRRSPHPLGLLRNGTESSDAAKRPGNYGAFVSDQAAENRSSSVAPAIEETEMNFNNLQSLRSLRSSSSAAVERHGVLASTKGSTFPVASGSEFRMLQDKSSAIAEAKQDGCTGNFKVLDSPFGNFLLPVIPSSTEFFE*
Homology
[Close]
BLAST of Csa2G000820 vs. TrEMBL
Match: A0A0A0LEY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000820 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 6.0e-78
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 1 

Query: 1   MGLGQTYLLVFVRKLRRSPHPLGLLRNGTESSDAAKRPGNYGAFVSDQAAENRSSSVAPA 60
           MGLGQTYLLVFVRKLRRSPHPLGLLRNGTESSDAAKRPGNYGAFVSDQAAENRSSSVAPA
Sbjct: 1   MGLGQTYLLVFVRKLRRSPHPLGLLRNGTESSDAAKRPGNYGAFVSDQAAENRSSSVAPA 60

Query: 61  IEETEMNFNNLQSLRSLRSSSSAAVERHGVLASTKGSTFPVASGSEFRMLQDKSSAIAEA 120
           IEETEMNFNNLQSLRSLRSSSSAAVERHGVLASTKGSTFPVASGSEFRMLQDKSSAIAEA
Sbjct: 61  IEETEMNFNNLQSLRSLRSSSSAAVERHGVLASTKGSTFPVASGSEFRMLQDKSSAIAEA 120

Query: 121 KQDGCTGNFKVLDSPFGNFLLPVIPSSTEFFE 153
           KQDGCTGNFKVLDSPFGNFLLPVIPSSTEFFE
Sbjct: 121 KQDGCTGNFKVLDSPFGNFLLPVIPSSTEFFE 152

[Close]
BLAST of Csa2G000820 vs. TrEMBL
Match: A0A067FGS7_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g036283mg PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 6.3e-11
Identity = 38/74 (51.35%), Postives = 52/74 (70.27%), Query Frame = 1 

Query: 78  RSSSSAAVERHGVLASTKGSTFPVASGSEF--RMLQDKSSAIAEAKQDGCTGNFKVLDSP 137
           R  SS+  ++   + ST  +T PVA  SE   R+ Q K+ A+A+A+Q+GCTGNFK+ DSP
Sbjct: 41  RIDSSSTADKTRDVPSTSHTTVPVAQTSEINVRIQQAKNFAVAQAQQEGCTGNFKIFDSP 100

Query: 138 FGNFLLPVIPSSTE 150
           FGNFL+PVIP+  E
Sbjct: 101 FGNFLVPVIPTRKE 114

[Close]
BLAST of Csa2G000820 vs. TrEMBL
Match: V4UEP4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010342mg PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.4e-10
Identity = 37/71 (52.11%), Postives = 51/71 (71.83%), Query Frame = 1 

Query: 81  SSAAVERHGVLASTKGSTFPVASGSEF--RMLQDKSSAIAEAKQDGCTGNFKVLDSPFGN 140
           SS+  ++   + ST  +T PVA  SE   R+ Q K+ A+A+A+Q+GCTGNFK+ DSPFGN
Sbjct: 149 SSSTADKTRDVPSTSHTTVPVAQTSEINVRIQQAKNFAVAQAQQEGCTGNFKIFDSPFGN 208

Query: 141 FLLPVIPSSTE 150
           FL+PVIP+  E
Sbjct: 209 FLVPVIPTRKE 219

[Close]
BLAST of Csa2G000820 vs. TrEMBL
Match: K4BT05_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.0e-08
Identity = 27/42 (64.29%), Postives = 38/42 (90.48%), Query Frame = 1 

Query: 108 RMLQDKSSAIAEAKQDGCTGNFKVLDSPFGNFLLPVIPSSTE 150
           + L+D++SA+A+A+QDGCTGNF++ DSPFGNFL+PVIP+  E
Sbjct: 41  KQLRDRNSAVAQAQQDGCTGNFRIFDSPFGNFLVPVIPTPAE 82

[Close]
BLAST of Csa2G000820 vs. TrEMBL
Match: A0A067KCF3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07373 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-08
Identity = 32/72 (44.44%), Postives = 46/72 (63.89%), Query Frame = 1 

Query: 78  RSSSSAAVERHGVLASTKGSTFPVASGSEFRMLQDKSSAIAEAKQDGCTGNFKVLDSPFG 137
           R++ S A +  G   S      P+    ++R  Q K  A+A+A+Q+GCTGNF++ DSPFG
Sbjct: 22  RTAPSQAGKVTGDATSVSSFQVPITPVVDYRFQQAKHFAVAQAQQEGCTGNFRISDSPFG 81

Query: 138 NFLLPVIPSSTE 150
           NFL+PVIP+  E
Sbjct: 82  NFLVPVIPTRAE 93

[Close]
BLAST of Csa2G000820 vs. NCBI nr
Match: gi|700205456|gb|KGN60575.1| (hypothetical protein Csa_2G000820 [Cucumis sativus])

HSP 1 Score: 298.1 bits (762), Expect = 8.6e-78
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 1 

Query: 1   MGLGQTYLLVFVRKLRRSPHPLGLLRNGTESSDAAKRPGNYGAFVSDQAAENRSSSVAPA 60
           MGLGQTYLLVFVRKLRRSPHPLGLLRNGTESSDAAKRPGNYGAFVSDQAAENRSSSVAPA
Sbjct: 1   MGLGQTYLLVFVRKLRRSPHPLGLLRNGTESSDAAKRPGNYGAFVSDQAAENRSSSVAPA 60

Query: 61  IEETEMNFNNLQSLRSLRSSSSAAVERHGVLASTKGSTFPVASGSEFRMLQDKSSAIAEA 120
           IEETEMNFNNLQSLRSLRSSSSAAVERHGVLASTKGSTFPVASGSEFRMLQDKSSAIAEA
Sbjct: 61  IEETEMNFNNLQSLRSLRSSSSAAVERHGVLASTKGSTFPVASGSEFRMLQDKSSAIAEA 120

Query: 121 KQDGCTGNFKVLDSPFGNFLLPVIPSSTEFFE 153
           KQDGCTGNFKVLDSPFGNFLLPVIPSSTEFFE
Sbjct: 121 KQDGCTGNFKVLDSPFGNFLLPVIPSSTEFFE 152

[Close]
BLAST of Csa2G000820 vs. NCBI nr
Match: gi|449446530|ref|XP_004141024.1| (PREDICTED: uncharacterized protein LOC101218541 [Cucumis sativus])

HSP 1 Score: 150.2 bits (378), Expect = 2.9e-33
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 1 

Query: 76  SLRSSSSAAVERHGVLASTKGSTFPVASGSEFRMLQDKSSAIAEAKQDGCTGNFKVLDSP 135
           S RSSSSAAVERHGVLASTKGSTFPVASGSEFRMLQDKSSAIAEAKQDGCTGNFKVLDSP
Sbjct: 31  SRRSSSSAAVERHGVLASTKGSTFPVASGSEFRMLQDKSSAIAEAKQDGCTGNFKVLDSP 90

Query: 136 FGNFLLPVIPSSTEFFE 153
           FGNFLLPVIPSSTEFFE
Sbjct: 91  FGNFLLPVIPSSTEFFE 107

[Close]
BLAST of Csa2G000820 vs. NCBI nr
Match: gi|659071239|ref|XP_008458849.1| (PREDICTED: hexokinase-1-like isoform X1 [Cucumis melo])

HSP 1 Score: 97.1 bits (240), Expect = 2.9e-17
Identity = 49/56 (87.50%), Postives = 52/56 (92.86%), Query Frame = 1 

Query: 76  SLRSSSSAAVERHGVLASTKGSTFPVASGSEFRMLQDKSSAIAEAKQDGCTGNFKV 132
           S RS SSAA+ERH V ASTKGSTFPVASGSEFR+LQDKSSAIAEAKQDGCTGNFK+
Sbjct: 31  SRRSLSSAAIERHRVSASTKGSTFPVASGSEFRILQDKSSAIAEAKQDGCTGNFKM 86

[Close]
BLAST of Csa2G000820 vs. NCBI nr
Match: gi|641847715|gb|KDO66594.1| (hypothetical protein CISIN_1g036283mg, partial [Citrus sinensis])

HSP 1 Score: 75.5 bits (184), Expect = 9.1e-11
Identity = 38/74 (51.35%), Postives = 52/74 (70.27%), Query Frame = 1 

Query: 78  RSSSSAAVERHGVLASTKGSTFPVASGSEF--RMLQDKSSAIAEAKQDGCTGNFKVLDSP 137
           R  SS+  ++   + ST  +T PVA  SE   R+ Q K+ A+A+A+Q+GCTGNFK+ DSP
Sbjct: 41  RIDSSSTADKTRDVPSTSHTTVPVAQTSEINVRIQQAKNFAVAQAQQEGCTGNFKIFDSP 100

Query: 138 FGNFLLPVIPSSTE 150
           FGNFL+PVIP+  E
Sbjct: 101 FGNFLVPVIPTRKE 114

[Close]
BLAST of Csa2G000820 vs. NCBI nr
Match: gi|567918612|ref|XP_006451312.1| (hypothetical protein CICLE_v10010342mg [Citrus clementina])

HSP 1 Score: 74.3 bits (181), Expect = 2.0e-10
Identity = 37/71 (52.11%), Postives = 51/71 (71.83%), Query Frame = 1 

Query: 81  SSAAVERHGVLASTKGSTFPVASGSEF--RMLQDKSSAIAEAKQDGCTGNFKVLDSPFGN 140
           SS+  ++   + ST  +T PVA  SE   R+ Q K+ A+A+A+Q+GCTGNFK+ DSPFGN
Sbjct: 149 SSSTADKTRDVPSTSHTTVPVAQTSEINVRIQQAKNFAVAQAQQEGCTGNFKIFDSPFGN 208

Query: 141 FLLPVIPSSTE 150
           FL+PVIP+  E
Sbjct: 209 FLVPVIPTRKE 219

The following BLAST results are available for this feature:
BLAST of Csa2G000820 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LEY3_CUCSA6.0e-78100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000820 PE=4 SV=1[more]
A0A067FGS7_CITSI6.3e-1151.35Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g036283mg PE=4 S... [more]
V4UEP4_9ROSI1.4e-1052.11Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010342mg PE=4 SV=1[more]
K4BT05_SOLLC1.0e-0864.29Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
A0A067KCF3_JATCU1.3e-0844.44Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07373 PE=4 SV=1[more]
BLAST of Csa2G000820 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700205456|gb|KGN60575.1|8.6e-78100.00hypothetical protein Csa_2G000820 [Cucumis sativus][more]
gi|449446530|ref|XP_004141024.1|2.9e-3398.70PREDICTED: uncharacterized protein LOC101218541 [Cucumis sativus][more]
gi|659071239|ref|XP_008458849.1|2.9e-1787.50PREDICTED: hexokinase-1-like isoform X1 [Cucumis melo][more]
gi|641847715|gb|KDO66594.1|9.1e-1151.35hypothetical protein CISIN_1g036283mg, partial [Citrus sinensis][more]
gi|567918612|ref|XP_006451312.1|2.0e-1052.11hypothetical protein CICLE_v10010342mg [Citrus clementina][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU125364cucumber EST collection version 3.0transcribed_cluster
CU176016cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G000820.1Csa2G000820.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU125364CU125364transcribed_cluster
CU176016CU176016transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G000820Cla016799Watermelon (97103) v1cuwmB162
Csa2G000820ClCG11G002070Watermelon (Charleston Gray)cuwcgB096
Csa2G000820Lsi11G002210Bottle gourd (USVL1VR-Ls)culsiB098
Csa2G000820Cla97C11G208470Watermelon (97103) v2cuwmbB103
Csa2G000820Bhi06G001457Wax gourdcuwgoB129
Csa2G000820CSPI02G00780Wild cucumber (PI 183967)cpicuB065
Csa2G000820CmoCh05G013750Cucurbita moschata (Rifu)cmocuB783
Csa2G000820Cp4.1LG11g11410Cucurbita pepo (Zucchini)cpecuB103
Csa2G000820Carg10832Silver-seed gourdcarcuB0598
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G000820Watermelon (97103) v2cuwmbB130
Csa2G000820Watermelon (97103) v2cuwmbB156
Csa2G000820Wax gourdcuwgoB144
Csa2G000820Wax gourdcuwgoB211
Csa2G000820Cucumber (Chinese Long) v2cucuB010
Csa2G000820Cucumber (Gy14) v1cgycuB150
Csa2G000820Cucumber (Gy14) v1cgycuB415
Csa2G000820Cucurbita maxima (Rimu)cmacuB075
Csa2G000820Cucurbita maxima (Rimu)cmacuB119
Csa2G000820Cucurbita maxima (Rimu)cmacuB173
Csa2G000820Cucurbita maxima (Rimu)cmacuB791
Csa2G000820Cucurbita moschata (Rifu)cmocuB065
Csa2G000820Cucurbita moschata (Rifu)cmocuB105
Csa2G000820Cucurbita moschata (Rifu)cmocuB157
Csa2G000820Melon (DHL92) v3.5.1cumeB110
Csa2G000820Melon (DHL92) v3.5.1cumeB129
Csa2G000820Melon (DHL92) v3.5.1cumeB140
Csa2G000820Watermelon (Charleston Gray)cuwcgB134
Csa2G000820Watermelon (Charleston Gray)cuwcgB163
Csa2G000820Watermelon (97103) v1cuwmB114
Csa2G000820Watermelon (97103) v1cuwmB119
Csa2G000820Cucurbita pepo (Zucchini)cpecuB370
Csa2G000820Cucurbita pepo (Zucchini)cpecuB662
Csa2G000820Cucurbita pepo (Zucchini)cpecuB821
Csa2G000820Bottle gourd (USVL1VR-Ls)culsiB134
Csa2G000820Bottle gourd (USVL1VR-Ls)culsiB139
Csa2G000820Cucumber (Gy14) v2cgybcuB019
Csa2G000820Cucumber (Gy14) v2cgybcuB056
Csa2G000820Melon (DHL92) v3.6.1cumedB106
Csa2G000820Melon (DHL92) v3.6.1cumedB133
Csa2G000820Silver-seed gourdcarcuB0042
Csa2G000820Silver-seed gourdcarcuB0102
Csa2G000820Silver-seed gourdcarcuB0217
Csa2G000820Silver-seed gourdcarcuB0912
Csa2G000820Silver-seed gourdcarcuB0914