Csa1G710160 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G710160
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPhloem filament protein; contains IPR009994 (Phloem filament PP1)
LocationChr1 : 28936666 .. 28937506 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCGTCCAAATGGGAAAGAGAAGCATGAGAAGAAGAGCCTTCTAGCTTTCTCCAAAAATAAGCAAAAAGGAAAGATATAGCAAAGATGAGTTGTGTGGACAAGGGGGAGTGGTCAAAAATACCTGTTTGTACAACACCATGTGTTCTTGATATAGCAAATTTTGCAGTGACGGAACACAACAAAGAAACTGGAGAAAAATTGACACTCAAAAGTGTTATAAAAGGATGGTTTTTGGAGTTGGGCGATGTGAAATTAAAGTTTCGTTTGTACATTCTAGCAGCAAACGACAAAGGAGTTGTCCTAACCTATGAAGCAGTTGTGTGCGTCACAGAAATAGGTGACTTTAAAAGAGTGAAGAAACTCTTATCTTTCAATGTCGGTTATTTGGATGAGAAGGATGTATTTTGGATTGTAATTGTTGATACTAAAGCGTCTTGTGTGCAAGACGTGGCAAAGTTTGCTGTGGCAAAGCATAATGAAGACGAACATGATAGTCTTGTCTACCTTTCTATCACTAAAGGTTGGTATCGAGAACTTGACCCGTATAATGCTATATTCTTCGAAATTCATCTTACGACGAAGGATTGTTTTGGACGAGTGCGTGAGTTTAAGGCTTTGGTTCTAGAAGACAAACCTCAAAAGGAGAAAATCCGAACACTCAAATATTTCGAAGTTATAAAGAAATGTTGAAAACTTGCTATCTATATGTAAGTGAGAGTGGTTATGTTATGTGTTATGTCTATGTTCTTGACTATATATCCATAAATGAATAGTCAAGTTTAAACTAAATAAAACGTTTTAAATTATATGTCACTCTTTATGCCAAATTTTATTAAGGAA

mRNA sequence

ATGAGTTGTGTGGACAAGGGGGAGTGGTCAAAAATACCTGTTTGTACAACACCATGTGTTCTTGATATAGCAAATTTTGCAGTGACGGAACACAACAAAGAAACTGGAGAAAAATTGACACTCAAAAGTGTTATAAAAGGATGGTTTTTGGAGTTGGGCGATGTGAAATTAAAGTTTCGTTTGTACATTCTAGCAGCAAACGACAAAGGAGTTGTCCTAACCTATGAAGCAGTTGTGTGCGTCACAGAAATAGGTGACTTTAAAAGAGTGAAGAAACTCTTATCTTTCAATGTCGGTTATTTGGATGAGAAGGATGTATTTTGGATTGTAATTGTTGATACTAAAGCGTCTTGTGTGCAAGACGTGGCAAAGTTTGCTGTGGCAAAGCATAATGAAGACGAACATGATAGTCTTGTCTACCTTTCTATCACTAAAGGTTGGTATCGAGAACTTGACCCGTATAATGCTATATTCTTCGAAATTCATCTTACGACGAAGGATTGTTTTGGACGAGTGCGTGAGTTTAAGGCTTTGGTTCTAGAAGACAAACCTCAAAAGGAGAAAATCCGAACACTCAAATATTTCGAAGTTATAAAGAAATGTTGA

Coding sequence (CDS)

ATGAGTTGTGTGGACAAGGGGGAGTGGTCAAAAATACCTGTTTGTACAACACCATGTGTTCTTGATATAGCAAATTTTGCAGTGACGGAACACAACAAAGAAACTGGAGAAAAATTGACACTCAAAAGTGTTATAAAAGGATGGTTTTTGGAGTTGGGCGATGTGAAATTAAAGTTTCGTTTGTACATTCTAGCAGCAAACGACAAAGGAGTTGTCCTAACCTATGAAGCAGTTGTGTGCGTCACAGAAATAGGTGACTTTAAAAGAGTGAAGAAACTCTTATCTTTCAATGTCGGTTATTTGGATGAGAAGGATGTATTTTGGATTGTAATTGTTGATACTAAAGCGTCTTGTGTGCAAGACGTGGCAAAGTTTGCTGTGGCAAAGCATAATGAAGACGAACATGATAGTCTTGTCTACCTTTCTATCACTAAAGGTTGGTATCGAGAACTTGACCCGTATAATGCTATATTCTTCGAAATTCATCTTACGACGAAGGATTGTTTTGGACGAGTGCGTGAGTTTAAGGCTTTGGTTCTAGAAGACAAACCTCAAAAGGAGAAAATCCGAACACTCAAATATTTCGAAGTTATAAAGAAATGTTGA

Protein sequence

MSCVDKGEWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFRLYILAANDKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDEKDVFWIVIVDTKASCVQDVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKALVLEDKPQKEKIRTLKYFEVIKKC*
Homology
[Close]
BLAST of Csa1G710160 vs. TrEMBL
Match: A0A0A0LYF4_CUCSA (Phloem filament protein OS=Cucumis sativus GN=Csa_1G710160 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 2.2e-112
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1 

Query: 1   MSCVDKGEWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFR 60
           MSCVDKGEWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFR
Sbjct: 1   MSCVDKGEWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFR 60

Query: 61  LYILAANDKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDEKDVFWIVIVDTKASCVQ 120
           LYILAANDKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDEKDVFWIVIVDTKASCVQ
Sbjct: 61  LYILAANDKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDEKDVFWIVIVDTKASCVQ 120

Query: 121 DVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKALVL 180
           DVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKALVL
Sbjct: 121 DVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKALVL 180

Query: 181 EDKPQKEKIRTLKYFEVIKKC 202
           EDKPQKEKIRTLKYFEVIKKC
Sbjct: 181 EDKPQKEKIRTLKYFEVIKKC 201

[Close]
BLAST of Csa1G710160 vs. TrEMBL
Match: A0A0A0K3W6_CUCSA (Phloem filament protein OS=Cucumis sativus GN=Csa_7G222880 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 5.0e-48
Identity = 101/201 (50.25%), Postives = 134/201 (66.67%), Query Frame = 1 

Query: 1   MSCVDKGEWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFR 60
           MSC  K  W KIP CTTPCV ++A   V +HNK +G+ L  K VI GWF E+ D  +K R
Sbjct: 1   MSCDSKKTWIKIPDCTTPCVNEVAKDGVNQHNKASGDSLVYKRVIVGWFWEIDDHAIKHR 60

Query: 61  LYILAANDKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDEKD--VFWIVIVDTKASC 120
           L I     KGVVL YE ++ V +  D KRV+ L+SF  GYLDEK+  +FWI I D K SC
Sbjct: 61  LIIEVVTSKGVVLIYELIIVVVQ-KDGKRVRTLISFLPGYLDEKNPLIFWIKIPDVKKSC 120

Query: 121 VQDVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKAL 180
           VQD AK+AV +HN+  HD L Y S  +GWY E++P+  I F++H+  K+C GRVR++ A+
Sbjct: 121 VQDCAKWAVTEHNKITHDYLAYDSTVEGWYHEVNPF-VIIFKLHIKAKECIGRVRDYIAV 180

Query: 181 VLEDKPQKEKIRTLKYFEVIK 200
           V E+KP  EKI+ L+ F +I+
Sbjct: 181 VKEEKPLTEKIKKLEDFYLIR 199

[Close]
BLAST of Csa1G710160 vs. TrEMBL
Match: P94012_CUCMA (Phloem filament protein OS=Cucurbita maxima GN=PP1 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-23
Identity = 74/198 (37.37%), Postives = 113/198 (57.07%), Query Frame = 1 

Query: 8   EWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFRLYILAAN 67
           +W KIP  +  CV ++A  AV + N + G  L   S+ +GW+ ELG   LK+RL+I A +
Sbjct: 16  KWIKIPDVSGHCVQEVAKLAVEQFNVQHGHSLKYDSIHEGWYCELGQNNLKYRLHIRAID 75

Query: 68  DKGVVLTYEAVVCVTEIGDFKRVKKLLSF--------NVGYLDEKDV-FWIVIVDTKASC 127
                L YEA+V   E    +R++KL+SF         VG +D   V  WI I D +   
Sbjct: 76  FLQRSLLYEALV-FEEKPKLERIRKLISFLYLLNGGHYVGPVDPPQVEKWIKIPDLRVPF 135

Query: 128 VQDVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKAL 187
           VQ+V+KFA+ ++N+   + L Y+ I  GWY E+   N I F +H+  KDC GR+R ++A+
Sbjct: 136 VQEVSKFAIDEYNKG-GEGLKYVEIYDGWYAEMGQDN-IKFRLHVKAKDCLGRLRNYEAI 195

Query: 188 VLEDKPQKEKIRTLKYFE 197
           VL  +   +KI+ L+ F+
Sbjct: 196 VLVKQFLSKKIKILESFK 210

[Close]
BLAST of Csa1G710160 vs. TrEMBL
Match: P94012_CUCMA (Phloem filament protein OS=Cucurbita maxima GN=PP1 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.2e-17
Identity = 64/175 (36.57%), Postives = 95/175 (54.29%), Query Frame = 1 

Query: 8   EWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFRLYILAAN 67
           +W KIP    P V ++A FAV EHNK  G+ L    V +GWF++LG   +KFRL++ A +
Sbjct: 319 KWIKIPNVQVPLVQELAKFAVDEHNKN-GDGLKYIEVYEGWFMDLGHDNIKFRLHLKAKD 378

Query: 68  DKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDEKDVFWIVIVDTKASCVQDVAKFAV 127
             G +  YEAVV V      KR+K L SF +      +  WI I + K   +Q V KF V
Sbjct: 379 WLGRIRNYEAVVLVEHFWS-KRIKILESFKLCGPLVFEPKWIQIPNLKELGLQVVIKFIV 438

Query: 128 AKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKALVLED 183
            +      DSL +  + +GWY  L P N++ +  H+   D  GR  +F+ +++E+
Sbjct: 439 EQIKIKFGDSLKFEIVYEGWYFGLCP-NSLKYRFHVKVIDFLGRPLKFEVVIIEE 490


HSP 2 Score: 98.2 bits (243), Expect = 1.2e-17
Identity = 65/176 (36.93%), Postives = 93/176 (52.84%), Query Frame = 1 

Query: 8   EWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFRLYILAAN 67
           +W KIP    P V ++A FAV EHNK  G+ L    V +GWF++LG   +KFRL++ A +
Sbjct: 515 KWIKIPNVQVPLVQELAKFAVDEHNKN-GDGLKYIEVYEGWFMDLGHDNIKFRLHLKAKD 574

Query: 68  DKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDEKDVFWIVIVDTKASCVQDVAKFAV 127
             G +  YEAVV V      KR+K L SF        +  WI I + K    Q V  F V
Sbjct: 575 WLGRIRNYEAVVLVEHFWS-KRIKILESFKFCGPLVFEPKWIQIPNLKEPGFQVVINFIV 634

Query: 128 AKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKALVLEDK 184
            +      D L + SI +GWY EL P  ++ F +H+   D  GR   ++ +++E+K
Sbjct: 635 EQLKIILGDCLKFHSIYEGWYFELCPI-SLKFRLHIKAIDFLGRCLNYEIIIIEEK 687


HSP 3 Score: 97.1 bits (240), Expect = 2.7e-17
Identity = 69/204 (33.82%), Postives = 105/204 (51.47%), Query Frame = 1 

Query: 8   EWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFRLYILAAN 67
           +W +IP    P    + NF V +     G+ L   S+ +GW+ EL  + LKFRL+I A +
Sbjct: 612 KWIQIPNLKEPGFQVVINFIVEQLKIILGDCLKFHSIYEGWYFELCPISLKFRLHIKAID 671

Query: 68  DKGVVLTYEAVVCVTEIGDFKRVKKLLSF--------NVGYLDEKDV-FWIVIVDTKASC 127
             G  L YE ++      + KR+ KL S          VG +D   V  WI I + + + 
Sbjct: 672 FLGRCLNYEIIII-----EEKRIFKLESIIVILSPGHCVGPVDPPKVEKWIKISNLQFAF 731

Query: 128 VQDVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKAL 187
           +Q+V+KFA+   N    DSL +  I  GWY E+   N I F IHL  KDC  RV  ++A 
Sbjct: 732 LQEVSKFALDDFNVKSGDSLRFDGIYDGWYMEMGQDN-IKFRIHLRAKDCLSRVHHYEAY 791

Query: 188 VLEDKPQKEKIRTLKYFEVI-KKC 202
           V   +   ++I+ ++ F++I +KC
Sbjct: 792 VYVKQFLSKRIKIVESFKLIERKC 809


HSP 4 Score: 92.0 bits (227), Expect = 8.7e-16
Identity = 60/190 (31.58%), Postives = 103/190 (54.21%), Query Frame = 1 

Query: 8   EWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFRLYILAAN 67
           +W +IP      +  +  F V +   + G+ L  + V +GW+  L    LK+R ++   +
Sbjct: 416 KWIQIPNLKELGLQVVIKFIVEQIKIKFGDSLKFEIVYEGWYFGLCPNSLKYRFHVKVID 475

Query: 68  DKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDE-KDVFWIVIVDTKASCVQDVAKFA 127
             G  L +E V+ + EI D  R+ KL S       E ++  WI I + +   VQ++AKFA
Sbjct: 476 FLGRPLKFEVVI-IEEIRDHLRIWKLDSIIAIVSPEPQEKKWIKIPNVQVPLVQELAKFA 535

Query: 128 VAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKALVLEDKPQK 187
           V +HN++  D L Y+ + +GW+ +L   N I F +HL  KD  GR+R ++A+VL +    
Sbjct: 536 VDEHNKNG-DGLKYIEVYEGWFMDLGHDN-IKFRLHLKAKDWLGRIRNYEAVVLVEHFWS 595

Query: 188 EKIRTLKYFE 197
           ++I+ L+ F+
Sbjct: 596 KRIKILESFK 602


HSP 5 Score: 90.9 bits (224), Expect = 1.9e-15
Identity = 59/190 (31.05%), Postives = 104/190 (54.74%), Query Frame = 1 

Query: 9   WSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFRLYILAAND 68
           W++IP      +  +  F V +   + G+ L  + V +GW+ EL    LK+R ++   + 
Sbjct: 221 WNQIPDVKELGLQVVIKFIVEQIKIKFGDSLKFEIVYEGWYFELCPNSLKYRFHVKVIDF 280

Query: 69  KGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDE-KDVFWIVIVDTKASCVQDVAKFAV 128
            G  L +E ++ + E     R+ KL S  V    E ++  WI I + +   VQ++AKFAV
Sbjct: 281 LGRSLKFEIII-IEERRVLLRIWKLDSIIVIVSPEPQEKKWIKIPNVQVPLVQELAKFAV 340

Query: 129 AKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKALVLEDKPQKE 188
            +HN++  D L Y+ + +GW+ +L   N I F +HL  KD  GR+R ++A+VL +    +
Sbjct: 341 DEHNKNG-DGLKYIEVYEGWFMDLGHDN-IKFRLHLKAKDWLGRIRNYEAVVLVEHFWSK 400

Query: 189 KIRTLKYFEV 198
           +I+ L+ F++
Sbjct: 401 RIKILESFKL 407


HSP 6 Score: 98.2 bits (243), Expect = 1.2e-17
Identity = 65/176 (36.93%), Postives = 93/176 (52.84%), Query Frame = 1 

Query: 8   EWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFRLYILAAN 67
           +W KIP    P V ++A FAV EHNK  G+ L    V +GWF++LG   +KFRL++ A +
Sbjct: 126 KWIKIPNVQVPLVQELAKFAVDEHNKN-GDGLKYIEVYEGWFMDLGHDNIKFRLHLKAKD 185

Query: 68  DKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDEKDVFWIVIVDTKASCVQDVAKFAV 127
             G +  YEAVV V      KR+K L SF        +  WI I + K    Q V  F V
Sbjct: 186 WLGRIRNYEAVVLVEHFWS-KRIKILESFKFCGPLVFEPKWIQIPNLKEPGFQVVINFIV 245

Query: 128 AKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKALVLEDK 184
            +      D L + SI +GWY EL P  ++ F +H+   D  GR   ++ +++E+K
Sbjct: 246 EQLKIILGDCLKFHSIYEGWYFELCPI-SLKFRLHIKAIDFLGRCLNYEIIIIEEK 298

[Close]
BLAST of Csa1G710160 vs. TrEMBL
Match: Q7DMD5_CUCMA (Phloem filament protein (Fragment) OS=Cucurbita maxima GN=cPC7 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.7e-17
Identity = 69/204 (33.82%), Postives = 105/204 (51.47%), Query Frame = 1 

Query: 8   EWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFRLYILAAN 67
           +W +IP    P    + NF V +     G+ L   S+ +GW+ EL  + LKFRL+I A +
Sbjct: 223 KWIQIPNLKEPGFQVVINFIVEQLKIILGDCLKFHSIYEGWYFELCPISLKFRLHIKAID 282

Query: 68  DKGVVLTYEAVVCVTEIGDFKRVKKLLSF--------NVGYLDEKDV-FWIVIVDTKASC 127
             G  L YE ++      + KR+ KL S          VG +D   V  WI I + + + 
Sbjct: 283 FLGRCLNYEIIII-----EEKRIFKLESIIVILSPGHCVGPVDPPKVEKWIKISNLQFAF 342

Query: 128 VQDVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKAL 187
           +Q+V+KFA+   N    DSL +  I  GWY E+   N I F IHL  KDC  RV  ++A 
Sbjct: 343 LQEVSKFALDDFNVKSGDSLRFDGIYDGWYMEMGQDN-IKFRIHLRAKDCLSRVHHYEAY 402

Query: 188 VLEDKPQKEKIRTLKYFEVI-KKC 202
           V   +   ++I+ ++ F++I +KC
Sbjct: 403 VYVKQFLSKRIKIVESFKLIERKC 420


HSP 2 Score: 92.0 bits (227), Expect = 8.7e-16
Identity = 60/190 (31.58%), Postives = 103/190 (54.21%), Query Frame = 1 

Query: 8   EWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFRLYILAAN 67
           +W +IP      +  +  F V +   + G+ L  + V +GW+  L    LK+R ++   +
Sbjct: 27  KWIQIPNLKELGLQVVIKFIVEQIKIKFGDSLKFEIVYEGWYFGLCPNSLKYRFHVKVID 86

Query: 68  DKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDE-KDVFWIVIVDTKASCVQDVAKFA 127
             G  L +E V+ + EI D  R+ KL S       E ++  WI I + +   VQ++AKFA
Sbjct: 87  FLGRPLKFEVVI-IEEIRDHLRIWKLDSIIAIVSPEPQEKKWIKIPNVQVPLVQELAKFA 146

Query: 128 VAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKALVLEDKPQK 187
           V +HN++  D L Y+ + +GW+ +L   N I F +HL  KD  GR+R ++A+VL +    
Sbjct: 147 VDEHNKNG-DGLKYIEVYEGWFMDLGHDN-IKFRLHLKAKDWLGRIRNYEAVVLVEHFWS 206

Query: 188 EKIRTLKYFE 197
           ++I+ L+ F+
Sbjct: 207 KRIKILESFK 213


HSP 3 Score: 84.3 bits (207), Expect = 1.8e-13
Identity = 43/96 (44.79%), Postives = 59/96 (61.46%), Query Frame = 1 

Query: 8   EWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFRLYILAAN 67
           +W +IP   TPCV+D+  +AV ++NK   + L  K VI GW+LE+   K K RL I   N
Sbjct: 9   KWIQIPDTKTPCVIDLGKYAVDDYNKAHKDNLVFKKVIIGWYLEIDYDKTKLRLIIEVVN 68

Query: 68  DKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDE 104
            KG V+ YE V+ V +  D K+VK  +SF  GY+DE
Sbjct: 69  SKGEVIIYEVVIVVDD-KDGKKVKTPISFIPGYIDE 103

[Close]
BLAST of Csa1G710160 vs. NCBI nr
Match: gi|778664635|ref|XP_011660324.1| (PREDICTED: uncharacterized protein LOC105436367 [Cucumis sativus])

HSP 1 Score: 412.9 bits (1060), Expect = 3.2e-112
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1 

Query: 1   MSCVDKGEWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFR 60
           MSCVDKGEWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFR
Sbjct: 1   MSCVDKGEWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFR 60

Query: 61  LYILAANDKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDEKDVFWIVIVDTKASCVQ 120
           LYILAANDKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDEKDVFWIVIVDTKASCVQ
Sbjct: 61  LYILAANDKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDEKDVFWIVIVDTKASCVQ 120

Query: 121 DVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKALVL 180
           DVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKALVL
Sbjct: 121 DVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKALVL 180

Query: 181 EDKPQKEKIRTLKYFEVIKKC 202
           EDKPQKEKIRTLKYFEVIKKC
Sbjct: 181 EDKPQKEKIRTLKYFEVIKKC 201

[Close]
BLAST of Csa1G710160 vs. NCBI nr
Match: gi|700188975|gb|KGN44208.1| (Phloem filament protein [Cucumis sativus])

HSP 1 Score: 199.1 bits (505), Expect = 7.2e-48
Identity = 101/201 (50.25%), Postives = 134/201 (66.67%), Query Frame = 1 

Query: 1   MSCVDKGEWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFR 60
           MSC  K  W KIP CTTPCV ++A   V +HNK +G+ L  K VI GWF E+ D  +K R
Sbjct: 1   MSCDSKKTWIKIPDCTTPCVNEVAKDGVNQHNKASGDSLVYKRVIVGWFWEIDDHAIKHR 60

Query: 61  LYILAANDKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDEKD--VFWIVIVDTKASC 120
           L I     KGVVL YE ++ V +  D KRV+ L+SF  GYLDEK+  +FWI I D K SC
Sbjct: 61  LIIEVVTSKGVVLIYELIIVVVQ-KDGKRVRTLISFLPGYLDEKNPLIFWIKIPDVKKSC 120

Query: 121 VQDVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKAL 180
           VQD AK+AV +HN+  HD L Y S  +GWY E++P+  I F++H+  K+C GRVR++ A+
Sbjct: 121 VQDCAKWAVTEHNKITHDYLAYDSTVEGWYHEVNPF-VIIFKLHIKAKECIGRVRDYIAV 180

Query: 181 VLEDKPQKEKIRTLKYFEVIK 200
           V E+KP  EKI+ L+ F +I+
Sbjct: 181 VKEEKPLTEKIKKLEDFYLIR 199

[Close]
BLAST of Csa1G710160 vs. NCBI nr
Match: gi|778730266|ref|XP_011659743.1| (PREDICTED: uncharacterized protein LOC101206992 [Cucumis sativus])

HSP 1 Score: 199.1 bits (505), Expect = 7.2e-48
Identity = 101/201 (50.25%), Postives = 134/201 (66.67%), Query Frame = 1 

Query: 1   MSCVDKGEWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFR 60
           MSC  K  W KIP CTTPCV ++A   V +HNK +G+ L  K VI GWF E+ D  +K R
Sbjct: 226 MSCDSKKTWIKIPDCTTPCVNEVAKDGVNQHNKASGDSLVYKRVIVGWFWEIDDHAIKHR 285

Query: 61  LYILAANDKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDEKD--VFWIVIVDTKASC 120
           L I     KGVVL YE ++ V +  D KRV+ L+SF  GYLDEK+  +FWI I D K SC
Sbjct: 286 LIIEVVTSKGVVLIYELIIVVVQ-KDGKRVRTLISFLPGYLDEKNPLIFWIKIPDVKKSC 345

Query: 121 VQDVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKAL 180
           VQD AK+AV +HN+  HD L Y S  +GWY E++P+  I F++H+  K+C GRVR++ A+
Sbjct: 346 VQDCAKWAVTEHNKITHDYLAYDSTVEGWYHEVNPF-VIIFKLHIKAKECIGRVRDYIAV 405

Query: 181 VLEDKPQKEKIRTLKYFEVIK 200
           V E+KP  EKI+ L+ F +I+
Sbjct: 406 VKEEKPLTEKIKKLEDFYLIR 424

[Close]
BLAST of Csa1G710160 vs. NCBI nr
Match: gi|778730266|ref|XP_011659743.1| (PREDICTED: uncharacterized protein LOC101206992 [Cucumis sativus])

HSP 1 Score: 165.6 bits (418), Expect = 8.8e-38
Identity = 90/195 (46.15%), Postives = 121/195 (62.05%), Query Frame = 1 

Query: 8   EWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFRLYILAAN 67
           +W +IP   TPCV+D+  +AV ++NK   + L  K VI GW+LE+   K K RL I   N
Sbjct: 9   KWIQIPDTKTPCVIDLGKYAVDDYNKAHKDNLVFKKVIIGWYLEIDYDKTKLRLIIEVVN 68

Query: 68  DKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDEKD--VFWIVIVDTKASCVQDVAKF 127
            KG V+ YE V+ V +  D K+VK  +SF  GY+DE D  +FW  I+D     VQ +AKF
Sbjct: 69  SKGEVIIYEVVIVVDD-KDGKKVKTPISFIPGYIDEVDPWLFWFRIIDINDPHVQQIAKF 128

Query: 128 AVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKALVLEDKPQ 187
           AV KHN+D +DSLVY+S    WYR L P     ++++L  KDC GRVR+++ALV E+K  
Sbjct: 129 AVEKHNQDNNDSLVYISTIVCWYRLLSPI-LKQYKVYLKAKDCLGRVRDYEALVEEEKKL 188

Query: 188 KEKIRTLKYFEVIKK 201
              I  L YF+VI K
Sbjct: 189 PNAILKLIYFKVIPK 201


HSP 2 Score: 75.5 bits (184), Expect = 1.2e-10
Identity = 57/212 (26.89%), Postives = 95/212 (44.81%), Query Frame = 1 

Query: 9   WSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFRLYILAAND 68
           W +I     P V  IA FAV +HN++  + L   S I  W+  L  +  ++++Y+ A + 
Sbjct: 110 WFRIIDINDPHVQQIAKFAVEKHNQDNNDSLVYISTIVCWYRLLSPILKQYKVYLKAKDC 169

Query: 69  KGVVLTYEAVV--------CVTEIGDFKRVKKLLSFNVGYLDEKDVF------------- 128
            G V  YEA+V         + ++  FK + K       ++  K                
Sbjct: 170 LGRVRDYEALVEEEKKLPNAILKLIYFKVIPKKSEGGKKHITTKTFSKISKKRDSKMSCD 229

Query: 129 ----WIVIVDTKASCVQDVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHL 188
               WI I D    CV +VAK  V +HN+   DSLVY  +  GW+ E+D + AI   + +
Sbjct: 230 SKKTWIKIPDCTTPCVNEVAKDGVNQHNKASGDSLVYKRVIVGWFWEIDDH-AIKHRLII 289

Query: 189 TTKDCFGRVREFKALVLEDKPQKEKIRTLKYF 196
                 G V  ++ +++  +   +++RTL  F
Sbjct: 290 EVVTSKGVVLIYELIIVVVQKDGKRVRTLISF 320


HSP 3 Score: 167.9 bits (424), Expect = 1.8e-38
Identity = 91/203 (44.83%), Postives = 126/203 (62.07%), Query Frame = 1 

Query: 1   MSCVDKGE-WSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKF 60
           MSC  K E W +I   TTPCV++    AV +HNKE G+ L  K VI GW+LE+   K K 
Sbjct: 1   MSCETKKEQWIQIHDTTTPCVINFGKHAVDDHNKEKGDNLVFKKVIIGWYLEIDYNKTKL 60

Query: 61  RLYILAANDKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDEKD--VFWIVIVDTKAS 120
           RL I   N KG V+T+E V+ V +  D K VK ++SF  G++DEK+   FWI I +    
Sbjct: 61  RLIIEVVNSKGEVITFEVVIVVDD-KDGKTVKTVISFVPGHIDEKNPWTFWIKIHNVTEP 120

Query: 121 CVQDVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKA 180
            VQ++AKFAV +HN+  HD+L+Y+ I +GWY          +++HL  KDC GRVRE++A
Sbjct: 121 HVQEIAKFAVEEHNKITHDNLIYICIIEGWYHVSTIPPVTLWKLHLKAKDCLGRVREYEA 180

Query: 181 LVLEDKPQKEKIRTLKYFEVIKK 201
           LV E+K   + +  L++F VI K
Sbjct: 181 LVKEEKLLPKHVLKLEHFIVIPK 202

[Close]
BLAST of Csa1G710160 vs. NCBI nr
Match: gi|1753099|gb|AAC12676.1| (phloem filament protein [Cucurbita maxima])

HSP 1 Score: 118.2 bits (295), Expect = 1.6e-23
Identity = 74/198 (37.37%), Postives = 113/198 (57.07%), Query Frame = 1 

Query: 8   EWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFRLYILAAN 67
           +W KIP  +  CV ++A  AV + N + G  L   S+ +GW+ ELG   LK+RL+I A +
Sbjct: 16  KWIKIPDVSGHCVQEVAKLAVEQFNVQHGHSLKYDSIHEGWYCELGQNNLKYRLHIRAID 75

Query: 68  DKGVVLTYEAVVCVTEIGDFKRVKKLLSF--------NVGYLDEKDV-FWIVIVDTKASC 127
                L YEA+V   E    +R++KL+SF         VG +D   V  WI I D +   
Sbjct: 76  FLQRSLLYEALV-FEEKPKLERIRKLISFLYLLNGGHYVGPVDPPQVEKWIKIPDLRVPF 135

Query: 128 VQDVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKAL 187
           VQ+V+KFA+ ++N+   + L Y+ I  GWY E+   N I F +H+  KDC GR+R ++A+
Sbjct: 136 VQEVSKFAIDEYNKG-GEGLKYVEIYDGWYAEMGQDN-IKFRLHVKAKDCLGRLRNYEAI 195

Query: 188 VLEDKPQKEKIRTLKYFE 197
           VL  +   +KI+ L+ F+
Sbjct: 196 VLVKQFLSKKIKILESFK 210

The following BLAST results are available for this feature:
BLAST of Csa1G710160 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LYF4_CUCSA2.2e-112100.00Phloem filament protein OS=Cucumis sativus GN=Csa_1G710160 PE=4 SV=1[more]
A0A0A0K3W6_CUCSA5.0e-4850.25Phloem filament protein OS=Cucumis sativus GN=Csa_7G222880 PE=4 SV=1[more]
P94012_CUCMA1.1e-2337.37Phloem filament protein OS=Cucurbita maxima GN=PP1 PE=4 SV=1[more]
P94012_CUCMA1.2e-1736.57Phloem filament protein OS=Cucurbita maxima GN=PP1 PE=4 SV=1[more]
Q7DMD5_CUCMA2.7e-1733.82Phloem filament protein (Fragment) OS=Cucurbita maxima GN=cPC7 PE=2 SV=1[more]
BLAST of Csa1G710160 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778664635|ref|XP_011660324.1|3.2e-112100.00PREDICTED: uncharacterized protein LOC105436367 [Cucumis sativus][more]
gi|700188975|gb|KGN44208.1|7.2e-4850.25Phloem filament protein [Cucumis sativus][more]
gi|778730266|ref|XP_011659743.1|7.2e-4850.25PREDICTED: uncharacterized protein LOC101206992 [Cucumis sativus][more]
gi|778730266|ref|XP_011659743.1|8.8e-3846.15PREDICTED: uncharacterized protein LOC101206992 [Cucumis sativus][more]
gi|1753099|gb|AAC12676.1|1.6e-2337.37phloem filament protein [Cucurbita maxima][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009994PP1
IPR020381Proteinase inhibitor I25, cystatin, conserved region
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0010951 negative regulation of endopeptidase activity
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU087421cucumber EST collection version 3.0transcribed_cluster
CU103083cucumber EST collection version 3.0transcribed_cluster
CU124174cucumber EST collection version 3.0transcribed_cluster
CU129480cucumber EST collection version 3.0transcribed_cluster
CU129530cucumber EST collection version 3.0transcribed_cluster
CU133336cucumber EST collection version 3.0transcribed_cluster
CU174316cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G710160.1Csa1G710160.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU129480CU129480transcribed_cluster
CU133336CU133336transcribed_cluster
CU087421CU087421transcribed_cluster
CU103083CU103083transcribed_cluster
CU174316CU174316transcribed_cluster
CU129530CU129530transcribed_cluster
CU124174CU124174transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009994Phloem filament PP1PFAMPF07430PP1coord: 118..194
score: 4.5E-18coord: 19..96
score: 1.2
IPR020381Proteinase inhibitor I25, cystatin, conserved regionPRODOMPD001231coord: 20..79
score: 2.0E-5coord: 119..184
score: 0
NoneNo IPR availableGENE3DG3DSA:3.10.450.10coord: 7..89
score: 1.
NoneNo IPR availableunknownSSF54403Cystatin/monellincoord: 116..196
score: 6.62E-8coord: 7..97
score: 5.74