Csa1G700630 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G700630
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 28163171 .. 28163473 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTGCTCACATTGATTTTTCATGGACTCAAACCCAACCTATACTGGAAAACATCGAAGTCGACTCCGTCGGTACCCATCATCCGAACGATAGCGGCAAAGGCAGAGACCTCAACATCGATATCTTAAGAACCCACCCATCGTCTGAGAACAACCAAGGAGAAGATGGAGATATCGAGTATTACGACCACCACGAAACTCCTCTTCTCCTTGCTGCTGCCAACGGAATCATCGAGATCGTCCAACAAATCGTCGAAGTTTACCCTCAGGCCGTTGATTACGTAGGCATAACAAAATTGTAG

mRNA sequence

ATGCTTGCTCACATTGATTTTTCATGGACTCAAACCCAACCTATACTGGAAAACATCGAAGTCGACTCCGTCGGTACCCATCATCCGAACGATAGCGGCAAAGGCAGAGACCTCAACATCGATATCTTAAGAACCCACCCATCGTCTGAGAACAACCAAGGAGAAGATGGAGATATCGAGTATTACGACCACCACGAAACTCCTCTTCTCCTTGCTGCTGCCAACGGAATCATCGAGATCGTCCAACAAATCGTCGAAGTTTACCCTCAGGCCGTTGATTACGTAGGCATAACAAAATTGTAG

Coding sequence (CDS)

ATGCTTGCTCACATTGATTTTTCATGGACTCAAACCCAACCTATACTGGAAAACATCGAAGTCGACTCCGTCGGTACCCATCATCCGAACGATAGCGGCAAAGGCAGAGACCTCAACATCGATATCTTAAGAACCCACCCATCGTCTGAGAACAACCAAGGAGAAGATGGAGATATCGAGTATTACGACCACCACGAAACTCCTCTTCTCCTTGCTGCTGCCAACGGAATCATCGAGATCGTCCAACAAATCGTCGAAGTTTACCCTCAGGCCGTTGATTACGTAGGCATAACAAAATTGTAG

Protein sequence

MLAHIDFSWTQTQPILENIEVDSVGTHHPNDSGKGRDLNIDILRTHPSSENNQGEDGDIEYYDHHETPLLLAAANGIIEIVQQIVEVYPQAVDYVGITKL*
Homology
[Close]
BLAST of Csa1G700630 vs. TrEMBL
Match: A0A0A0M3N8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G700630 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 4.1e-51
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 

Query: 1   MLAHIDFSWTQTQPILENIEVDSVGTHHPNDSGKGRDLNIDILRTHPSSENNQGEDGDIE 60
           MLAHIDFSWTQTQPILENIEVDSVGTHHPNDSGKGRDLNIDILRTHPSSENNQGEDGDIE
Sbjct: 1   MLAHIDFSWTQTQPILENIEVDSVGTHHPNDSGKGRDLNIDILRTHPSSENNQGEDGDIE 60

Query: 61  YYDHHETPLLLAAANGIIEIVQQIVEVYPQAVDYVGITKL 101
           YYDHHETPLLLAAANGIIEIVQQIVEVYPQAVDYVGITKL
Sbjct: 61  YYDHHETPLLLAAANGIIEIVQQIVEVYPQAVDYVGITKL 100

[Close]
BLAST of Csa1G700630 vs. TrEMBL
Match: A0A0A0M140_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G700690 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 7.1e-27
Identity = 67/96 (69.79%), Postives = 76/96 (79.17%), Query Frame = 1 

Query: 1  MLAHIDFSWTQTQPILENI-EVDSVGTHHPNDSGKGRDLNIDILRTHPSSENNQGEDGDI 60
          MLAHIDFSW QTQ     I EVDS G   P +     D+++ IL THPSS++NQGE GDI
Sbjct: 1  MLAHIDFSWRQTQATPPEITEVDSFGLPLPKEG----DVDLHILTTHPSSDHNQGEIGDI 60

Query: 61 EYYDHHETPLLLAAANGIIEIVQQIVEVYPQAVDYV 96
          E+Y+HHETPLLLAAANGIIEIVQQIVEV+PQAVDYV
Sbjct: 61 EFYEHHETPLLLAAANGIIEIVQQIVEVFPQAVDYV 92

[Close]
BLAST of Csa1G700630 vs. NCBI nr
Match: gi|700211740|gb|KGN66836.1| (hypothetical protein Csa_1G700630 [Cucumis sativus])

HSP 1 Score: 208.4 bits (529), Expect = 5.9e-51
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 

Query: 1   MLAHIDFSWTQTQPILENIEVDSVGTHHPNDSGKGRDLNIDILRTHPSSENNQGEDGDIE 60
           MLAHIDFSWTQTQPILENIEVDSVGTHHPNDSGKGRDLNIDILRTHPSSENNQGEDGDIE
Sbjct: 1   MLAHIDFSWTQTQPILENIEVDSVGTHHPNDSGKGRDLNIDILRTHPSSENNQGEDGDIE 60

Query: 61  YYDHHETPLLLAAANGIIEIVQQIVEVYPQAVDYVGITKL 101
           YYDHHETPLLLAAANGIIEIVQQIVEVYPQAVDYVGITKL
Sbjct: 61  YYDHHETPLLLAAANGIIEIVQQIVEVYPQAVDYVGITKL 100

[Close]
BLAST of Csa1G700630 vs. NCBI nr
Match: gi|700211746|gb|KGN66842.1| (hypothetical protein Csa_1G700690 [Cucumis sativus])

HSP 1 Score: 127.9 bits (320), Expect = 1.0e-26
Identity = 67/96 (69.79%), Postives = 76/96 (79.17%), Query Frame = 1 

Query: 1  MLAHIDFSWTQTQPILENI-EVDSVGTHHPNDSGKGRDLNIDILRTHPSSENNQGEDGDI 60
          MLAHIDFSW QTQ     I EVDS G   P +     D+++ IL THPSS++NQGE GDI
Sbjct: 1  MLAHIDFSWRQTQATPPEITEVDSFGLPLPKEG----DVDLHILTTHPSSDHNQGEIGDI 60

Query: 61 EYYDHHETPLLLAAANGIIEIVQQIVEVYPQAVDYV 96
          E+Y+HHETPLLLAAANGIIEIVQQIVEV+PQAVDYV
Sbjct: 61 EFYEHHETPLLLAAANGIIEIVQQIVEVFPQAVDYV 92

[Close]
BLAST of Csa1G700630 vs. NCBI nr
Match: gi|778665441|ref|XP_011648561.1| (PREDICTED: uncharacterized protein LOC101203890 [Cucumis sativus])

HSP 1 Score: 116.3 bits (290), Expect = 3.1e-23
Identity = 61/92 (66.30%), Postives = 71/92 (77.17%), Query Frame = 1 

Query: 7   FSWTQTQPILENI-EVDSVGTHHPNDSGKGRDLNIDILRTHPSSENNQGEDGDIEYYDHH 66
           FSW QTQ     I EVDS G   P +     D+++ IL THPSS++NQGE GDIE+Y+HH
Sbjct: 270 FSWRQTQATPPEITEVDSFGLPLPKEG----DVDLHILTTHPSSDHNQGEIGDIEFYEHH 329

Query: 67  ETPLLLAAANGIIEIVQQIVEVYPQAVDYVGI 98
           ETPLLLAAANGIIEIVQQIVEV+PQAVDYV +
Sbjct: 330 ETPLLLAAANGIIEIVQQIVEVFPQAVDYVTV 357

[Close]
BLAST of Csa1G700630 vs. NCBI nr
Match: gi|659118462|ref|XP_008459132.1| (PREDICTED: uncharacterized protein LOC103498332 [Cucumis melo])

HSP 1 Score: 75.5 bits (184), Expect = 6.0e-11
Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 1 

Query: 59  IEYYDHHETPLLLAAANGIIEIVQQIVEVYPQAVDYVGITK 100
           +EYYDHHETPLLLAAANGIIEIVQQIV VYPQAVDYV + +
Sbjct: 1   MEYYDHHETPLLLAAANGIIEIVQQIVHVYPQAVDYVTVNQ 41

[Close]
BLAST of Csa1G700630 vs. NCBI nr
Match: gi|778665435|ref|XP_011648558.1| (PREDICTED: uncharacterized protein LOC105434529 [Cucumis sativus])

HSP 1 Score: 62.8 bits (151), Expect = 4.0e-07
Identity = 39/95 (41.05%), Postives = 51/95 (53.68%), Query Frame = 1 

Query: 1   MLAHIDFSWTQTQPILENIEVDSVGTHHPNDSGKGRDLNIDILRTHPSSENNQGEDGDIE 60
           MLA++D SW Q +   EN ++                  + I R     + N  +D  + 
Sbjct: 298 MLANLDDSWFQCKQHPENTKL------------------LPIFRDQYLEDQN-ADDKSMI 357

Query: 61  YYDHHETPLLLAAANGIIEIVQQIVEVYPQAVDYV 96
           Y DHHE PLLLA A GIIE+V+ I+EV PQAVDYV
Sbjct: 358 YKDHHEMPLLLATARGIIEVVKTIIEVDPQAVDYV 373

The following BLAST results are available for this feature:
BLAST of Csa1G700630 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M3N8_CUCSA4.1e-51100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G700630 PE=4 SV=1[more]
A0A0A0M140_CUCSA7.1e-2769.79Uncharacterized protein OS=Cucumis sativus GN=Csa_1G700690 PE=4 SV=1[more]
BLAST of Csa1G700630 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211740|gb|KGN66836.1|5.9e-51100.00hypothetical protein Csa_1G700630 [Cucumis sativus][more]
gi|700211746|gb|KGN66842.1|1.0e-2669.79hypothetical protein Csa_1G700690 [Cucumis sativus][more]
gi|778665441|ref|XP_011648561.1|3.1e-2366.30PREDICTED: uncharacterized protein LOC101203890 [Cucumis sativus][more]
gi|659118462|ref|XP_008459132.1|6.0e-1185.37PREDICTED: uncharacterized protein LOC103498332 [Cucumis melo][more]
gi|778665435|ref|XP_011648558.1|4.0e-0741.05PREDICTED: uncharacterized protein LOC105434529 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G700630.1Csa1G700630.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G700630Bottle gourd (USVL1VR-Ls)culsiB033
Csa1G700630Cucumber (Gy14) v2cgybcuB002
Csa1G700630Melon (DHL92) v3.6.1cumedB012
Csa1G700630Silver-seed gourdcarcuB0121
Csa1G700630Silver-seed gourdcarcuB0251
Csa1G700630Watermelon (97103) v2cuwmbB011
Csa1G700630Wax gourdcuwgoB031
Csa1G700630Cucumber (Gy14) v1cgycuB470
Csa1G700630Cucurbita maxima (Rimu)cmacuB207
Csa1G700630Cucurbita maxima (Rimu)cmacuB400
Csa1G700630Cucurbita moschata (Rifu)cmocuB192
Csa1G700630Cucurbita moschata (Rifu)cmocuB387
Csa1G700630Melon (DHL92) v3.5.1cumeB017
Csa1G700630Watermelon (Charleston Gray)cuwcgB023
Csa1G700630Watermelon (97103) v1cuwmB044
Csa1G700630Watermelon (97103) v1cuwmB050
Csa1G700630Cucurbita pepo (Zucchini)cpecuB518
Csa1G700630Cucurbita pepo (Zucchini)cpecuB530