Csa1G688630 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G688630
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 27546159 .. 27549058 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGGCAGAGTAAAGGAGACATTCGAGTAATTTTGACATTTCACAAATTATTTGTTCTAAAATTCTATATATTTTTTAATTTGTAGCGAGTAATTATGTGAGGTACATTGAACTCTTAACGAGAGTGTGAGTAAATTATAAACAAAATGCAATATGGGAATGCTAATCTAGAGGAAGCCGGTAGTCTTAATGCTCAAGAAACCCAATACTCAGATGTTGAATCAGTCCTAAATGTAAGTAGTGAGAAATTAGAAGAGATTAAGGTAGAGGAAGAGGCTAAAGATTGTGAGATTTTGGAGAACATAATCAACAATGTCTGCCAATTGTTTGTGAAGAAAGGTATAGAAGAAGAACAACCTTCTCTCCAGAAATTCAAAGAAGAAATCTCACAGCACTTGCAAGACATCATCTAAACTTTATCTCCAACGTTCAAAGTAGTTTTGGATGTGGTAGTGCATTGAAAGTCCTTGTGTGAATTCAAAGGAGCTAGGAGTTAAAAAAAAGATTGGTAGTTAGAAAGCATATAAAGAAGATAGCCCCAATTTTGGTTTTGCTACAAATAACAAAAAAAAAGTTAAGTTTTGATCTAGAATTTTCAAATCCTTGTGGAGCTCTCTTGTACTTTTGATGCTTATGAACTGTTTGTAAAAATATTTTTGGATCACAAATGAATATGAACTTTATGATCATAGAGAGATTATGTATTTGGTTGGAACTTATTTCTTTAGCAAAGTTCATTTTGGAGCCTTGATCTTTTGGAGATAATTTAGTATGACATGACGAATTCCAGTAGGCAGTTTGGCACGAGGAAGAAAGAAGATTTTTAATTGTATAGCAGAAAGTATTTGCAGGAAACTATTGTTTCATGGAAAATTTTAAGGTTGAAGAAGTGAGTGGGTTTCAGATTCTTATGGGGCTTTAGTCACATAGGAAAGTACGAGTTATATTCGACCAAAGATAGTGACTGTTGACTCGAGTTGGAAAAGTTTTTGAGTTAATTCATTCCTCTAGCTGGAAAATTACTATGGGAATATAGAAGTCCACGTTGAATCAATAATCTAATTTGGAAAATGGCTTTGGGAGTTTATGGTTGTTAAAAAGGAAGATGTTTAATCACTGTTTGTCTCTTCAATCTTGACTTTATGCTTTGCCGCTAGTTAATCTTCACAATATCTGTTTTTCTTTTTGTTTTTGCTCATTCTCAACTTGTTTGCATTGTTGTTAGAATTGTGTTTGGGAAGATTCTATAGATTTGTATAGAGCAAGCTTCTTAGCGTAAGATCTCAATGAACTCATCAAACTTTTAGCCTCCTTATGGTGTTCCTTCTCCAAGGATCTCGAGATTGACACTATGCAAAATATAAGCCTAACCGATCGCCTCTTCTTTAAATGAATGTTTAATTCTTTTATTTGTATTTCCTTGTACTTCTTTTAATTCTTCTTTGTTTTGATTTTAGCTTGATGGAATATAATTATGGTGCTACGGAGGTGTCAAACTAAGCAAGCGGCCATCTTCTTGAAAAAAAGAAAAATTACATAGGATATCATTTTGAGAATATGATATAACAACTATAGCACATTGTTTTAGAATTTTGCAAATATGACAAAATTTTCACTTCTCCATCTTGAATTTGTTATTATTCTTAAACTACCGTTCAATAACTTATTTATCTTCCTCTTTTTAATGTCATACTCATTATTTATTTGTCTCCCACTTTTTAAGGCCATAATTATTTATTTATTCTTATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGTATCATTATCGAGTATATCAATGATATATTGTTAAAACATATCAGTAAAGTGAATCGTTATCAAGTATATGAATCAAGTTTACAAGTGTATATCAATAATATATCAAATGTATAAGTAGAACTTCAAGCATATCAAATGCATTTAATGAATCAATTGTATAAGTAAAGAATACTAAATGTATCTGCAGTGTATCAAACATATATTAGTAGTGTTTCAGATGTGTATCAAAGAGTATCCAACTATCAAGTGTATCAATCAAATGTATCAAGAAGTATCAGGTCTATCAAGGGATGTATTAGGTGTAAAAAGTGTATCAAACGTATATTAGTAACAATAATATTTGTGACATTTTACGTATTGATGTATGGGCTAAACTTTGTTTTTGTCATTTTTACAAATAATAAAATGTGTTCTACTAACTTAATTATTATAACTTATTTTACATTTTTGGTATTGAAAAAAAAAAAAAAACAACAAAAAATAGCACTCAACTTTTGGACAACTTCTTCAATTTAAAAGAAATGCCCCAAGGAGAAATAAAAAGCATCTTCACCCTCTCCCCGCGACTGCGACAACTTTAGCGGCGGCCATCGACTACTGCAGCTTCCAGCAAAATCCTTGGCGACGAGCGGCAACTCGCTTGGGCAAGGGAAGGTTGGTTTGCAATTCTTGTGATTCATTAACGCCATCAAAGAAGGGGAGCACAGTGTCACCAACCGGCTCCCAGGCTGAACTCGGTATTGGCACATGTTTTCTCTTTGAAGTTTTTATGAGTTTCAATTAGTACTGTCTTATTGGTCTACGAGCATATGGTGTTCACTTCTCCCTTGTTCATGGTTGCAGCAGCCGCACGCCGAATTGAATTCCCAACGGCAGCTCACTCTTTTCAGCAAAAGTGGTAA

mRNA sequence

ATGGTGGGCAGAGTAAAGGAGACATTCGAAAATGCCCCAAGGAGAAATAAAAAGCATCTTCACCCTCTCCCCGCGACTGCGACAACTTTAGCGGCGGCCATCGACTACTGCAGCTTCCAGCAAAATCCTTGGCGACGAGCGGCAACTCGCTTGGGCAAGGGAAGGTTGGTTTGCAATTCTTGTGATTCATTAACGCCATCAAAGAAGGGGAGCACAGTGTCACCAACCGGCTCCCAGGCTGAACTCGCAGCCGCACGCCGAATTGAATTCCCAACGGCAGCTCACTCTTTTCAGCAAAAGTGGTAA

Coding sequence (CDS)

ATGGTGGGCAGAGTAAAGGAGACATTCGAAAATGCCCCAAGGAGAAATAAAAAGCATCTTCACCCTCTCCCCGCGACTGCGACAACTTTAGCGGCGGCCATCGACTACTGCAGCTTCCAGCAAAATCCTTGGCGACGAGCGGCAACTCGCTTGGGCAAGGGAAGGTTGGTTTGCAATTCTTGTGATTCATTAACGCCATCAAAGAAGGGGAGCACAGTGTCACCAACCGGCTCCCAGGCTGAACTCGCAGCCGCACGCCGAATTGAATTCCCAACGGCAGCTCACTCTTTTCAGCAAAAGTGGTAA

Protein sequence

MVGRVKETFENAPRRNKKHLHPLPATATTLAAAIDYCSFQQNPWRRAATRLGKGRLVCNSCDSLTPSKKGSTVSPTGSQAELAAARRIEFPTAAHSFQQKW*
Homology
[Close]
BLAST of Csa1G688630 vs. TrEMBL
Match: A0A0A0M0W9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G688630 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.1e-51
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   MVGRVKETFENAPRRNKKHLHPLPATATTLAAAIDYCSFQQNPWRRAATRLGKGRLVCNS 60
           MVGRVKETFENAPRRNKKHLHPLPATATTLAAAIDYCSFQQNPWRRAATRLGKGRLVCNS
Sbjct: 1   MVGRVKETFENAPRRNKKHLHPLPATATTLAAAIDYCSFQQNPWRRAATRLGKGRLVCNS 60

Query: 61  CDSLTPSKKGSTVSPTGSQAELAAARRIEFPTAAHSFQQKW 102
           CDSLTPSKKGSTVSPTGSQAELAAARRIEFPTAAHSFQQKW
Sbjct: 61  CDSLTPSKKGSTVSPTGSQAELAAARRIEFPTAAHSFQQKW 101

[Close]
BLAST of Csa1G688630 vs. NCBI nr
Match: gi|700211676|gb|KGN66772.1| (hypothetical protein Csa_1G688630 [Cucumis sativus])

HSP 1 Score: 210.3 bits (534), Expect = 1.6e-51
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   MVGRVKETFENAPRRNKKHLHPLPATATTLAAAIDYCSFQQNPWRRAATRLGKGRLVCNS 60
           MVGRVKETFENAPRRNKKHLHPLPATATTLAAAIDYCSFQQNPWRRAATRLGKGRLVCNS
Sbjct: 1   MVGRVKETFENAPRRNKKHLHPLPATATTLAAAIDYCSFQQNPWRRAATRLGKGRLVCNS 60

Query: 61  CDSLTPSKKGSTVSPTGSQAELAAARRIEFPTAAHSFQQKW 102
           CDSLTPSKKGSTVSPTGSQAELAAARRIEFPTAAHSFQQKW
Sbjct: 61  CDSLTPSKKGSTVSPTGSQAELAAARRIEFPTAAHSFQQKW 101

The following BLAST results are available for this feature:
BLAST of Csa1G688630 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M0W9_CUCSA1.1e-51100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G688630 PE=4 SV=1[more]
BLAST of Csa1G688630 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211676|gb|KGN66772.1|1.6e-51100.00hypothetical protein Csa_1G688630 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G688630.1Csa1G688630.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G688630Bottle gourd (USVL1VR-Ls)culsiB058
Csa1G688630Bottle gourd (USVL1VR-Ls)culsiB081
Csa1G688630Cucumber (Gy14) v2cgybcuB002
Csa1G688630Silver-seed gourdcarcuB0927
Csa1G688630Watermelon (97103) v2cuwmbB082
Csa1G688630Cucumber (Gy14) v1cgycuB417
Csa1G688630Cucumber (Gy14) v1cgycuB418
Csa1G688630Cucurbita maxima (Rimu)cmacuB064
Csa1G688630Cucurbita maxima (Rimu)cmacuB085
Csa1G688630Cucurbita moschata (Rifu)cmocuB075
Csa1G688630Cucurbita moschata (Rifu)cmocuB054
Csa1G688630Watermelon (Charleston Gray)cuwcgB076
Csa1G688630Watermelon (Charleston Gray)cuwcgB085
Csa1G688630Cucurbita pepo (Zucchini)cpecuB639
Csa1G688630Cucurbita pepo (Zucchini)cpecuB701