Csa1G665930 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G665930
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRetrotransposon protein
LocationChr1 : 27042965 .. 27043902 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCAACAAATTCAAAAGCCACTTATAAGTATCGGTGGACAACCAATATTGAGGATGAGCCATTAGTTGAGTGCTTACTACAACTAATGGAGAAAAGTGACTGGAGGGCTTATAATTGGACATTTAAACTGGGATATTTGGTCAAAGTACAAAAACTAATAAAAGAAAAACTCCTGGAAGCAACATACAAGTAACTCTAAATTTAGAGTTGAGAGTGAAAATTTTGAAGAAGTACACTACCATAGAAAAGATGATGGGGCCAATATGTGTAGTAGGTTTGGCTGGAATGAGGAACGAAAGTGCATTAAAGTAGAGAAATCTATGTTCGATGACTGGGTTAAGGTAAGACGATGAATATAATTCATACTTTTCTATAAAAGTAAAATATAGTATACTTACATTTGTTAACTTCATGTAGGAACACCATAATGCTCGAGGCCTACTAAATAAATCATTTTCTTACTTTTATGACTTGCAAATTGTGATTGGTAGAGATAGGACTATTGGTGATAGATGCAAGACACCCGTTGAAATGGACCCACAAACTACAAAAGATATTGAGAAAGATGACATAGGCATTAATCTCGAAGACTTTGATATTCCAAAACCACATGGACTCGAGTTACCATCAGTAAAAAACATGTCATCCACTCCAACAAGTATGATACTTGATGCAAGATCATATAGGCAAAGTAGGAAAAGGAGGTCATATTCATGCACATTTTGTGCAAGTATGCGAGAAACTTTCAAGGAAATTGGAAAAATTGTTGCAATGGAAGAAAGAAAAATGAAAATAGAATCATCCTTGCACAAACAATTATATGTTGAATTACAGACTATTCATGGAATGGACGTGGACAATTGTTTAATTGTAGTTGAGTCTCTATTACCTAATCCCACGATGTTGCACACATTCCTTGACTACCCAACATAA

mRNA sequence

ATGGCGTCAACAAATTCAAAAGCCACTTATAAGTATCGGTGGACAACCAATATTGAGGATGAGCCATTAGTTGAGTGCTTACTACAACTAATGGAGAAAAGTGACTGGAGGGCTTATAATTGGACATTTAAACTGGGATATTTGGTCAAAGTACAAAAACTAATAAAAGAAAAACTCCTGGAAGCAACATACAATAGGTTTGGCTGGAATGAGGAACGAAAGTGCATTAAAGTAGAGAAATCTATGTTCGATGACTGGGTTAAGGAACACCATAATGCTCGAGGCCTACTAAATAAATCATTTTCTTACTTTTATGACTTGCAAATTGTGATTGGTAGAGATAGGACTATTGGTGATAGATGCAAGACACCCGTTGAAATGGACCCACAAACTACAAAAGATATTGAGAAAGATGACATAGGCATTAATCTCGAAGACTTTGATATTCCAAAACCACATGGACTCGAGTTACCATCAGTAAAAAACATGTCATCCACTCCAACAAGTATGATACTTGATGCAAGATCATATAGGCAAAGTAGGAAAAGGAGGTCATATTCATGCACATTTTGTGCAAGTATGCGAGAAACTTTCAAGGAAATTGGAAAAATTGTTGCAATGGAAGAAAGAAAAATGAAAATAGAATCATCCTTGCACAAACAATTATATGTTGAATTACAGACTATTCATGGAATGGACGTGGACAATTGTTTAATTGTAGTTGAGTCTCTATTACCTAATCCCACGATGTTGCACACATTCCTTGACTACCCAACATAA

Coding sequence (CDS)

ATGGCGTCAACAAATTCAAAAGCCACTTATAAGTATCGGTGGACAACCAATATTGAGGATGAGCCATTAGTTGAGTGCTTACTACAACTAATGGAGAAAAGTGACTGGAGGGCTTATAATTGGACATTTAAACTGGGATATTTGGTCAAAGTACAAAAACTAATAAAAGAAAAACTCCTGGAAGCAACATACAATAGGTTTGGCTGGAATGAGGAACGAAAGTGCATTAAAGTAGAGAAATCTATGTTCGATGACTGGGTTAAGGAACACCATAATGCTCGAGGCCTACTAAATAAATCATTTTCTTACTTTTATGACTTGCAAATTGTGATTGGTAGAGATAGGACTATTGGTGATAGATGCAAGACACCCGTTGAAATGGACCCACAAACTACAAAAGATATTGAGAAAGATGACATAGGCATTAATCTCGAAGACTTTGATATTCCAAAACCACATGGACTCGAGTTACCATCAGTAAAAAACATGTCATCCACTCCAACAAGTATGATACTTGATGCAAGATCATATAGGCAAAGTAGGAAAAGGAGGTCATATTCATGCACATTTTGTGCAAGTATGCGAGAAACTTTCAAGGAAATTGGAAAAATTGTTGCAATGGAAGAAAGAAAAATGAAAATAGAATCATCCTTGCACAAACAATTATATGTTGAATTACAGACTATTCATGGAATGGACGTGGACAATTGTTTAATTGTAGTTGAGTCTCTATTACCTAATCCCACGATGTTGCACACATTCCTTGACTACCCAACATAA

Protein sequence

MASTNSKATYKYRWTTNIEDEPLVECLLQLMEKSDWRAYNWTFKLGYLVKVQKLIKEKLLEATYNRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNMSSTPTSMILDARSYRQSRKRRSYSCTFCASMRETFKEIGKIVAMEERKMKIESSLHKQLYVELQTIHGMDVDNCLIVVESLLPNPTMLHTFLDYPT*
Homology
[Close]
BLAST of Csa1G665930 vs. TrEMBL
Match: A0A0A0M0S6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G665930 PE=4 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 6.5e-149
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 1 

Query: 1   MASTNSKATYKYRWTTNIEDEPLVECLLQLMEKSDWRAYNWTFKLGYLVKVQKLIKEKLL 60
           MASTNSKATYKYRWTTNIEDEPLVECLLQLMEKSDWRAYNWTFKLGYLVKVQKLIKEKLL
Sbjct: 1   MASTNSKATYKYRWTTNIEDEPLVECLLQLMEKSDWRAYNWTFKLGYLVKVQKLIKEKLL 60

Query: 61  EATYNRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIVIGRDRTIGDR 120
           EATYNRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIVIGRDRTIGDR
Sbjct: 61  EATYNRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIVIGRDRTIGDR 120

Query: 121 CKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNMSSTPTSMILDARSYRQS 180
           CKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNMSSTPTSMILDARSYRQS
Sbjct: 121 CKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNMSSTPTSMILDARSYRQS 180

Query: 181 RKRRSYSCTFCASMRETFKEIGKIVAMEERKMKIESSLHKQLYVELQTIHGMDVDNCLIV 240
           RKRRSYSCTFCASMRETFKEIGKIVAMEERKMKIESSLHKQLYVELQTIHGMDVDNCLIV
Sbjct: 181 RKRRSYSCTFCASMRETFKEIGKIVAMEERKMKIESSLHKQLYVELQTIHGMDVDNCLIV 240

Query: 241 VESLLPNPTMLHTFLDYPT 260
           VESLLPNPTMLHTFLDYPT
Sbjct: 241 VESLLPNPTMLHTFLDYPT 259

[Close]
BLAST of Csa1G665930 vs. TrEMBL
Match: A0A0A0L1J1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G333120 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.4e-26
Identity = 71/114 (62.28%), Postives = 84/114 (73.68%), Query Frame = 1 

Query: 113 RDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNMSSTPTSMIL 172
           RDR  G RCKT VEMD QT KDIE+DD+ INL +FDIP  + LE PS ++MSSTPTSM  
Sbjct: 8   RDRATGGRCKTLVEMDSQTAKDIEEDDMDINLGNFDIPNSYILEPPSGQDMSSTPTSMAH 67

Query: 173 DARSYRQSRKRRSYS----CTFCASMRETFKEIGKIVAMEERKMKIESSLHKQL 223
           DARS R S+K RSYS     TF   MRET K+IGKIVA ++ K++IES +HKQL
Sbjct: 68  DARSSRLSKKMRSYSEDLMDTFRTDMRETSKKIGKIVAWQKVKIEIESYIHKQL 121

[Close]
BLAST of Csa1G665930 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.3e-16
Identity = 66/212 (31.13%), Postives = 107/212 (50.47%), Query Frame = 1 

Query: 4   TNSKATYKYRWTTNIEDEPLVECLLQLMEKSDWRAYNWTFKLGYLVKVQKLI-------- 63
           T+S    K+ WT   E+  LVECL++L+    WR+ N TF+ GYL ++ +++        
Sbjct: 357 TSSSRLPKHTWTKE-EEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 416

Query: 64  --------KEKLLEATYNR-----------FGWNEERKCIKVEKSMFDDWVKEHHNARGL 123
                   + KL++  ++            FGWN+E+KCI  EK +FDDW   H  A+GL
Sbjct: 417 IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGL 476

Query: 124 LNKSFSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGI--NLEDFDIPKPH- 183
           LNKSF ++ +L  V G+DR  G R ++  ++    + D    D G    + D D P  + 
Sbjct: 477 LNKSFVHYDELSYVFGKDRATGGRAESFADIG---SNDPPGYDAGAADAMPDTDFPPMYS 536

Query: 184 -GLELPSVKNMSSTPTSMILDARSYRQSRKRR 185
            GL + S  ++  T T+ + + R+     KR+
Sbjct: 537 PGLNM-SPDDLMETRTARVSERRNVSSGSKRK 561

[Close]
BLAST of Csa1G665930 vs. TrEMBL
Match: M5VQY4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018564mg PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.8e-13
Identity = 53/159 (33.33%), Postives = 79/159 (49.69%), Query Frame = 1 

Query: 11  KYRWTTNIEDEPLVECLLQLMEKSDWRAYNWTFKLGYLVKVQKLIKEKL----------- 70
           K  WTT  ED  L+ECL++L + ++WR  +  FK GYL K++ +++ KL           
Sbjct: 258 KRYWTTK-EDNTLIECLMELHQNTNWRGDSG-FKNGYLNKLETMLEVKLPNSGLKASPHI 317

Query: 71  ------LEATYNR---------FGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKSFSYF 130
                 L+  Y           FGWNEE   +  EKS+FD W K + +A GL  KSF ++
Sbjct: 318 ESRVKTLKGKYGALADALSQSGFGWNEEEMMLVCEKSVFDAWAKNNKDASGLYGKSFPHY 377

Query: 131 YDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGIN 144
           Y L  + G+DR IG    T         +D+ +DD  ++
Sbjct: 378 YALGEIYGKDRAIG----TNAGNADDDEEDVRRDDASVH 410

[Close]
BLAST of Csa1G665930 vs. TrEMBL
Match: A0A0J8BIR4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g018220 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.3e-13
Identity = 74/305 (24.26%), Postives = 128/305 (41.97%), Query Frame = 1 

Query: 2   ASTNSKATYKYRWTTNIEDEPLVECLLQLMEKSDWRAYNWTFKLGYLVKVQKLIKEKL-- 61
           A +N+      RW+   ED  L+  +  L++   W+A N  FK G   K++ ++ +KL  
Sbjct: 7   ARSNNTTRNLSRWSV-AEDRALITAMTDLLDIGGWKADNGQFKSGAYAKLETIMLQKLPG 66

Query: 62  --------------------------LEATYNRFGWNEERKCIKVEKSMFDDWVKEHHNA 121
                                     L  + + FGWN+E K +   ++++D+W+K H NA
Sbjct: 67  CEKKAKPHIESRVKHLRKQYDAITEMLSPSASGFGWNDEEKFVTCPQAVWDEWIKSHKNA 126

Query: 122 RGLLNKSFSYFYDLQIVIGRDRTIGDRCKTPV----EMDPQTTKDIEKDDIGINLEDFDI 181
            GL NK F ++ +L  + G+DR +G+   T      EM+     + E     +N E+ + 
Sbjct: 127 AGLRNKPFPFYEELGKIWGKDRAVGNESGTVYDVLQEMEHGARVEEEHQVPDLNAEESNS 186

Query: 182 P---KPHGLELPSVKNMSSTPTSMILDARSYRQSRKRRSYSCTFCASMRETFKEIGKIVA 241
           P    P G   PS    S+TP+S          SR +R+ + T   +++E   +IGKI  
Sbjct: 187 PTQCDPTG--PPSSTPQSTTPSS----------SRTKRARTETI-EALKEFSTKIGKISD 246

Query: 242 MEERKMKIESSL-------------HKQLYVELQTIHGMDVDNCLIVVESLLPNPTMLHT 259
           + E   +    L               +L  E+  + G+     L+  + +  NP  +  
Sbjct: 247 VMEAATEHIGRLANCFQHESDSADRRMKLTTEIMKMEGLSPSEVLLASKKIALNPLEVDF 297

[Close]
BLAST of Csa1G665930 vs. NCBI nr
Match: gi|700211636|gb|KGN66732.1| (hypothetical protein Csa_1G665930 [Cucumis sativus])

HSP 1 Score: 534.6 bits (1376), Expect = 9.3e-149
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 1 

Query: 1   MASTNSKATYKYRWTTNIEDEPLVECLLQLMEKSDWRAYNWTFKLGYLVKVQKLIKEKLL 60
           MASTNSKATYKYRWTTNIEDEPLVECLLQLMEKSDWRAYNWTFKLGYLVKVQKLIKEKLL
Sbjct: 1   MASTNSKATYKYRWTTNIEDEPLVECLLQLMEKSDWRAYNWTFKLGYLVKVQKLIKEKLL 60

Query: 61  EATYNRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIVIGRDRTIGDR 120
           EATYNRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIVIGRDRTIGDR
Sbjct: 61  EATYNRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIVIGRDRTIGDR 120

Query: 121 CKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNMSSTPTSMILDARSYRQS 180
           CKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNMSSTPTSMILDARSYRQS
Sbjct: 121 CKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNMSSTPTSMILDARSYRQS 180

Query: 181 RKRRSYSCTFCASMRETFKEIGKIVAMEERKMKIESSLHKQLYVELQTIHGMDVDNCLIV 240
           RKRRSYSCTFCASMRETFKEIGKIVAMEERKMKIESSLHKQLYVELQTIHGMDVDNCLIV
Sbjct: 181 RKRRSYSCTFCASMRETFKEIGKIVAMEERKMKIESSLHKQLYVELQTIHGMDVDNCLIV 240

Query: 241 VESLLPNPTMLHTFLDYPT 260
           VESLLPNPTMLHTFLDYPT
Sbjct: 241 VESLLPNPTMLHTFLDYPT 259

[Close]
BLAST of Csa1G665930 vs. NCBI nr
Match: gi|659071532|ref|XP_008460440.1| (PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo])

HSP 1 Score: 280.4 bits (716), Expect = 3.2e-72
Identity = 139/198 (70.20%), Postives = 160/198 (80.81%), Query Frame = 1 

Query: 65  NRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIVIGRDRTIGDRCKTP 124
           +RFGWNEE+KCI+ +KS+FDDWVK H NARGLLNKSF YFYDL+I+ GRDR  G RCKTP
Sbjct: 6   SRFGWNEEQKCIEAQKSVFDDWVKGHPNARGLLNKSFPYFYDLKIMFGRDRATGGRCKTP 65

Query: 125 VEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNMSSTPTSMILDARSYRQSRKRR 184
           +EM  Q  +D E+DD+ INLEDFDIP PHGLE PS ++MSSTPTSM  D  S + S+KRR
Sbjct: 66  IEMGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAHDVGSSKPSKKRR 125

Query: 185 SYS----CTFCASMRETFKEIGKIVAMEERKMKIESSLHKQLYVELQTIHGMDVDNCLIV 244
           SYS     TF ASMRET KEI KI A +  KM+IESS+HK+LY ELQTI GMDVD+CLIV
Sbjct: 126 SYSEDLMDTFRASMRETSKEIRKIAAWQREKMEIESSIHKRLYAELQTIPGMDVDDCLIV 185

Query: 245 VESLLPNPTMLHTFLDYP 259
           VESLLP+P MLHTFLDYP
Sbjct: 186 VESLLPDPIMLHTFLDYP 203

[Close]
BLAST of Csa1G665930 vs. NCBI nr
Match: gi|659111294|ref|XP_008455678.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo])

HSP 1 Score: 250.8 bits (639), Expect = 2.7e-63
Identity = 142/238 (59.66%), Postives = 164/238 (68.91%), Query Frame = 1 

Query: 1   MASTNSKATYKYRWTTNIEDEPLVECLLQLMEKSDWRAYNWTFKLGYLVKVQKLIKEKL- 60
           MASTNSKAT K+RWTT I+D+ LVECLLQL+E+  WRA N TFK  YLV+VQKL+KEK+ 
Sbjct: 33  MASTNSKAT-KHRWTT-IKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIP 92

Query: 61  ---LEATYN------------------------RFGWNEERKCIKVEKSMFDDWVKEHHN 120
              ++ T N                        RFGWNEERKCI+ EKS+FDDWVK H N
Sbjct: 93  RSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEKSVFDDWVKGHPN 152

Query: 121 ARGLLNKSFSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKP 180
           ARGLLNK F+YFYDL+IV GRD+  G RCK  VEM  QT +D E+DD+ INLEDFDIP P
Sbjct: 153 ARGLLNKPFAYFYDLEIVFGRDKATGGRCKPFVEMASQTARDTEEDDMDINLEDFDIPNP 212

Query: 181 HGLELPSVKNMSSTPTSMILDARSYRQSRKRRSY----SCTFCASMRETFKEIGKIVA 207
           HGLE PS ++M ST  SM  DA S R S+KRRSY      TF ASM+ET KEIGKI A
Sbjct: 213 HGLEPPSGEDMPSTLISMTHDAGSSRPSKKRRSYPGDLMDTFRASMQETSKEIGKIAA 268

[Close]
BLAST of Csa1G665930 vs. NCBI nr
Match: gi|659125959|ref|XP_008462939.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo])

HSP 1 Score: 230.3 bits (586), Expect = 3.8e-57
Identity = 123/183 (67.21%), Postives = 139/183 (75.96%), Query Frame = 1 

Query: 1   MASTNSKATYKYRWTTNIEDEPLVECLLQLMEKSDWRAYNWTFKLGYLVKVQKLIKEKLL 60
           MAST SKAT K+RWTT IEDE LVECLLQL+E+  WRA N TFK GYL K    I E + 
Sbjct: 1   MASTYSKAT-KHRWTT-IEDETLVECLLQLVEEGGWRADNGTFKPGYL-KQYTAIAEMMG 60

Query: 61  EATYNRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIVIGRDRTIGDR 120
           +A  + FGWNEERKCI+ EKS+FDDWVK H NAR LLNK F YFYDL+IV GRD   GDR
Sbjct: 61  QAC-SGFGWNEERKCIEAEKSVFDDWVKGHPNARDLLNKPFPYFYDLKIVFGRDMATGDR 120

Query: 121 CKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNMSSTPTSMILDARSYRQS 180
           CKTPVEM  QT +D E+DD+ INLEDFDIP PHGLE PS ++M STPTSM  DA S R S
Sbjct: 121 CKTPVEMGSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPS 179

Query: 181 RKR 184
           +K+
Sbjct: 181 KKK 179

[Close]
BLAST of Csa1G665930 vs. NCBI nr
Match: gi|659125386|ref|XP_008462659.1| (PREDICTED: uncharacterized protein LOC103500963 [Cucumis melo])

HSP 1 Score: 206.1 bits (523), Expect = 7.6e-50
Identity = 103/157 (65.61%), Postives = 119/157 (75.80%), Query Frame = 1 

Query: 59  LLEATYNRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIVIGRDRTIG 118
           ++   Y+RFGWNEERKCI+ EKS+FDDWVK H NARGLLNK+F YFYDL++V GRDR   
Sbjct: 1   MMRPAYSRFGWNEERKCIEAEKSVFDDWVKGHPNARGLLNKAFPYFYDLEVVFGRDRATI 60

Query: 119 DRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNMSSTPTSMILDARSYR 178
            RCKTPV+M  Q  KD E+DD+ INLEDFDIP PH LE PS ++M+STPTSM  DA S R
Sbjct: 61  GRCKTPVQMGSQIAKDTEEDDMDINLEDFDIPNPHELEPPSREDMTSTPTSMAHDAGSSR 120

Query: 179 QSRKRRSYS----CTFCASMRETFKEIGKIVAMEERK 212
            S+KRRSYS     TF ASMRET KEIGKI A +  K
Sbjct: 121 PSKKRRSYSGDLVNTFHASMRETSKEIGKIAAWQREK 157

The following BLAST results are available for this feature:
BLAST of Csa1G665930 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M0S6_CUCSA6.5e-149100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G665930 PE=4 SV=1[more]
A0A0A0L1J1_CUCSA2.4e-2662.28Uncharacterized protein OS=Cucumis sativus GN=Csa_4G333120 PE=4 SV=1[more]
E5GCB5_CUCME1.3e-1631.13Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
M5VQY4_PRUPE1.8e-1333.33Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018564mg PE=4 SV=1[more]
A0A0J8BIR4_BETVU2.3e-1324.26Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g018220 PE=4 S... [more]
BLAST of Csa1G665930 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211636|gb|KGN66732.1|9.3e-149100.00hypothetical protein Csa_1G665930 [Cucumis sativus][more]
gi|659071532|ref|XP_008460440.1|3.2e-7270.20PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo][more]
gi|659111294|ref|XP_008455678.1|2.7e-6359.66PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo][more]
gi|659125959|ref|XP_008462939.1|3.8e-5767.21PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo][more]
gi|659125386|ref|XP_008462659.1|7.6e-5065.61PREDICTED: uncharacterized protein LOC103500963 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G665930.1Csa1G665930.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31704FAMILY NOT NAMEDcoord: 16..188
score: 1.2
NoneNo IPR availablePANTHERPTHR31704:SF16SUBFAMILY NOT NAMEDcoord: 16..188
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G665930CSPI01G32950Wild cucumber (PI 183967)cpicuB001
Csa1G665930Cucsa.027580Cucumber (Gy14) v1cgycuB555
Csa1G665930CsGy1G031730Cucumber (Gy14) v2cgybcuB002
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G665930Cucurbita maxima (Rimu)cmacuB064
Csa1G665930Cucurbita maxima (Rimu)cmacuB085
Csa1G665930Cucurbita moschata (Rifu)cmocuB075
Csa1G665930Cucurbita moschata (Rifu)cmocuB054
Csa1G665930Melon (DHL92) v3.5.1cumeB043
Csa1G665930Watermelon (97103) v1cuwmB030
Csa1G665930Cucurbita pepo (Zucchini)cpecuB360
Csa1G665930Cucurbita pepo (Zucchini)cpecuB639
Csa1G665930Bottle gourd (USVL1VR-Ls)culsiB058
Csa1G665930Melon (DHL92) v3.6.1cumedB035
Csa1G665930Silver-seed gourdcarcuB0305
Csa1G665930Silver-seed gourdcarcuB0927
Csa1G665930Wax gourdcuwgoB111