Csa1G661740 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G661740
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 26699215 .. 26699812 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGGTTTGGCAACTACTCCTGCAACTCAAGTGCTGGAAGATGATGAGATAGCAACAGAAAAAGAAAAGGTTTCATTCATTTTATTGAAATACTTCATTTTGATAACTGTGGAAATAACTCAATCAAAATGATAACAAATTGTGTTATTGTAGGAGATTGAAGGTGAAGATTTAGAAGAAACTTCGATAACTCAATCGTTGGAGGATGATGATGAAGAAAAGGTTTCATTCTTTTTATTAACAAATTCTCTCATTTTCAGTAGAAATTAAATTCAAACTGTTTTTGCACGTAGATTCAAATATGGAGTAGTTATGCTATATTATTAATAGTCTTCTATCACTAATAGTCAATGATAGTTTTCTATCACTGATAGTCAGTGATAGTCTTCTAAGTTTTTTTTCACAGTAGCTAGTTTATAGCTAAATTTAATGAATTTCAGGATGCTAATGTGGAAGAAAATAAAAGAAGGGAGAGAAAGTCAAAATTTAGAAACGGCGAAAAGGTAAATGTAGTTGATAGTGTATAACAATAGTTTTGGTCATATGCTATATATTTTTGTAAATTCTGAAGGTAATGCATATGGGTGTTGTATAA

mRNA sequence

ATGGTTGGTTTGGCAACTACTCCTGCAACTCAAGTGCTGGAAGATGATGAGATAGCAACAGAAAAAGAAAAGGAGATTGAAGGTGAAGATTTAGAAGAAACTTCGATAACTCAATCGTTGGAGGATGATGATGAAGAAAAGGATGCTAATGTGGAAGAAAATAAAAGAAGGGAGAGAAAGTCAAAATTTAGAAACGGCGAAAAGGTAATGCATATGGGTGTTGTATAA

Coding sequence (CDS)

ATGGTTGGTTTGGCAACTACTCCTGCAACTCAAGTGCTGGAAGATGATGAGATAGCAACAGAAAAAGAAAAGGAGATTGAAGGTGAAGATTTAGAAGAAACTTCGATAACTCAATCGTTGGAGGATGATGATGAAGAAAAGGATGCTAATGTGGAAGAAAATAAAAGAAGGGAGAGAAAGTCAAAATTTAGAAACGGCGAAAAGGTAATGCATATGGGTGTTGTATAA

Protein sequence

MVGLATTPATQVLEDDEIATEKEKEIEGEDLEETSITQSLEDDDEEKDANVEENKRRERKSKFRNGEKVMHMGVV*
Homology
[Close]
BLAST of Csa1G661740 vs. TrEMBL
Match: A0A0A0M0Q0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G661740 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 2.2e-33
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1 

Query: 1  MVGLATTPATQVLEDDEIATEKEKEIEGEDLEETSITQSLEDDDEEKDANVEENKRRERK 60
          MVGLATTPATQVLEDDEIATEKEKEIEGEDLEETSITQSLEDDDEEKDANVEENKRRERK
Sbjct: 1  MVGLATTPATQVLEDDEIATEKEKEIEGEDLEETSITQSLEDDDEEKDANVEENKRRERK 60

Query: 61 SKFRNGEKVMHMGVV 76
          SKFRNGEKVMHMGVV
Sbjct: 61 SKFRNGEKVMHMGVV 75

[Close]
BLAST of Csa1G661740 vs. NCBI nr
Match: gi|700211611|gb|KGN66707.1| (hypothetical protein Csa_1G661740 [Cucumis sativus])

HSP 1 Score: 149.1 bits (375), Expect = 3.2e-33
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1 

Query: 1  MVGLATTPATQVLEDDEIATEKEKEIEGEDLEETSITQSLEDDDEEKDANVEENKRRERK 60
          MVGLATTPATQVLEDDEIATEKEKEIEGEDLEETSITQSLEDDDEEKDANVEENKRRERK
Sbjct: 1  MVGLATTPATQVLEDDEIATEKEKEIEGEDLEETSITQSLEDDDEEKDANVEENKRRERK 60

Query: 61 SKFRNGEKVMHMGVV 76
          SKFRNGEKVMHMGVV
Sbjct: 61 SKFRNGEKVMHMGVV 75

The following BLAST results are available for this feature:
BLAST of Csa1G661740 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M0Q0_CUCSA2.2e-33100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G661740 PE=4 SV=1[more]
BLAST of Csa1G661740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211611|gb|KGN66707.1|3.2e-33100.00hypothetical protein Csa_1G661740 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G661740.1Csa1G661740.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G661740Watermelon (97103) v2cuwmbB035
Csa1G661740Cucumber (Gy14) v1cgycuB500
Csa1G661740Cucurbita maxima (Rimu)cmacuB057
Csa1G661740Cucurbita maxima (Rimu)cmacuB085
Csa1G661740Cucurbita moschata (Rifu)cmocuB075
Csa1G661740Cucurbita moschata (Rifu)cmocuB047
Csa1G661740Melon (DHL92) v3.5.1cumeB043
Csa1G661740Watermelon (Charleston Gray)cuwcgB038
Csa1G661740Watermelon (97103) v1cuwmB011
Csa1G661740Cucurbita pepo (Zucchini)cpecuB349
Csa1G661740Bottle gourd (USVL1VR-Ls)culsiB058
Csa1G661740Cucumber (Gy14) v2cgybcuB002
Csa1G661740Melon (DHL92) v3.6.1cumedB035
Csa1G661740Silver-seed gourdcarcuB0927