Csa1G658510 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G658510
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 26352558 .. 26352828 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAGTCTTCTACCCCATTTCCTGTTTTGGAAGGTTGGAGTCGGGGGTCGAGATTCCTCGTTCGAAGATCAGGTTATGTGGGAACAAAAATTTTGTTTTTAAATTTAATTAAAAAATATGGTATAAAAATAAATAAATATACATATATGTGTATAGAATCAGGGATGGAGCGGGAATACCCTCCCCAATTCGAGGACCCAATTGGTGTCCTCGGTTTGACCTCGACATTGGTCAAATTGAGGATTCACCGAATGGGGTGGGTCCCTAG

mRNA sequence

ATGGGGAGTCTTCTACCCCATTTCCTGTTTTGGAAGGTTGGAGTCGGGGGTCGAGATTCCTCGTTCGAAGATCAGGTTATAATCAGGGATGGAGCGGGAATACCCTCCCCAATTCGAGGACCCAATTGGTGTCCTCGGTTTGACCTCGACATTGGTCAAATTGAGGATTCACCGAATGGGGTGGGTCCCTAG

Coding sequence (CDS)

ATGGGGAGTCTTCTACCCCATTTCCTGTTTTGGAAGGTTGGAGTCGGGGGTCGAGATTCCTCGTTCGAAGATCAGGTTATAATCAGGGATGGAGCGGGAATACCCTCCCCAATTCGAGGACCCAATTGGTGTCCTCGGTTTGACCTCGACATTGGTCAAATTGAGGATTCACCGAATGGGGTGGGTCCCTAG

Protein sequence

MGSLLPHFLFWKVGVGGRDSSFEDQVIIRDGAGIPSPIRGPNWCPRFDLDIGQIEDSPNGVGP*
Homology
[Close]
BLAST of Csa1G658510 vs. TrEMBL
Match: A0A0A0M0L7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G658510 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.5e-30
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 1  MGSLLPHFLFWKVGVGGRDSSFEDQVIIRDGAGIPSPIRGPNWCPRFDLDIGQIEDSPNG 60
          MGSLLPHFLFWKVGVGGRDSSFEDQVIIRDGAGIPSPIRGPNWCPRFDLDIGQIEDSPNG
Sbjct: 1  MGSLLPHFLFWKVGVGGRDSSFEDQVIIRDGAGIPSPIRGPNWCPRFDLDIGQIEDSPNG 60

Query: 61 VGP 64
          VGP
Sbjct: 61 VGP 63

[Close]
BLAST of Csa1G658510 vs. NCBI nr
Match: gi|700211581|gb|KGN66677.1| (hypothetical protein Csa_1G658510 [Cucumis sativus])

HSP 1 Score: 139.4 bits (350), Expect = 2.1e-30
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 1  MGSLLPHFLFWKVGVGGRDSSFEDQVIIRDGAGIPSPIRGPNWCPRFDLDIGQIEDSPNG 60
          MGSLLPHFLFWKVGVGGRDSSFEDQVIIRDGAGIPSPIRGPNWCPRFDLDIGQIEDSPNG
Sbjct: 1  MGSLLPHFLFWKVGVGGRDSSFEDQVIIRDGAGIPSPIRGPNWCPRFDLDIGQIEDSPNG 60

Query: 61 VGP 64
          VGP
Sbjct: 61 VGP 63

The following BLAST results are available for this feature:
BLAST of Csa1G658510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M0L7_CUCSA1.5e-30100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G658510 PE=4 SV=1[more]
BLAST of Csa1G658510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211581|gb|KGN66677.1|2.1e-30100.00hypothetical protein Csa_1G658510 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G658510.1Csa1G658510.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G658510Cucumber (Gy14) v1cgycuB500
Csa1G658510Cucurbita maxima (Rimu)cmacuB057
Csa1G658510Cucurbita maxima (Rimu)cmacuB085
Csa1G658510Cucurbita moschata (Rifu)cmocuB075
Csa1G658510Cucurbita moschata (Rifu)cmocuB047
Csa1G658510Melon (DHL92) v3.5.1cumeB043
Csa1G658510Watermelon (Charleston Gray)cuwcgB038
Csa1G658510Watermelon (97103) v1cuwmB011
Csa1G658510Cucurbita pepo (Zucchini)cpecuB000
Csa1G658510Cucurbita pepo (Zucchini)cpecuB349
Csa1G658510Bottle gourd (USVL1VR-Ls)culsiB058
Csa1G658510Bottle gourd (USVL1VR-Ls)culsiB082
Csa1G658510Cucumber (Gy14) v2cgybcuB002
Csa1G658510Melon (DHL92) v3.6.1cumedB035
Csa1G658510Silver-seed gourdcarcuB0565
Csa1G658510Silver-seed gourdcarcuB0982
Csa1G658510Watermelon (97103) v2cuwmbB035
Csa1G658510Wax gourdcuwgoB090