Csa1G652300 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G652300
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionNAC domain protein; contains IPR003441 (No apical meristem (NAM) protein)
LocationChr1 : 25980595 .. 25983591 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAGTAGTTCGAAGAGAGGTGTGCCAACGACAAGCAGAAACAAGGTTATTAGATCCTTAAGAAAGCCCAGCAAGAACCACATGTGTAAGTTTTATTGCATGTGACTCATCCATGATAGCTTATTCGAATTTGTGTGAACTAGCAGACTGTCATTCAGTGGAGATGCTCCCTCCAACATGAGCAAATTAACCTTTTCAAAGCTAATTAGGAATGAATGGCACAAGACCCGTTCAATCTAGCTATAAATTTAATTATATATTTATATATATTATAATGTTTAACAATTAGTAGGTTATACTTAGCTTATTCATATTTGTTATATAAAAGATAATATTTTTTTGATAAAAGTTGCATAAGTTGAGTAGTTTTCAAATCATAATGTTTCCTACGAACAAAATCCTCTTCATTATTCTTTACTTAATGCCAACAAGGAAAAACAAAAAGAAAAAGCATTTTCAAGTGTGATTTTTTAAAGTCTCTTTCCTAATATATATATTTCTTTCTCAAGAAGCAATAAAATCGTTAATATAATTTTTAGTATATCTCTCACAAATTAATATTATTTTATGACACGTCAACATAAACCTATTTCTTTTTTCTTCCCCATAAAAATATTGACATGCTCTATCTAATATGGATTTTTCTAAATATAGAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCAACACATATATTACAAACTTTAAAGAAAAACATTGTAATAATATGTATGAAGTTATCCCATATATAGATTGTAATATATATTTTAATAATATTAGAAATTTGGAATGAATTGGATCAACCCAAATTAAAAATTATATAACATTCCAATCAAATTCGATCCAAAAAAACATTAAAAAAATTCAACCTACCTCAATTTATTAAAATAAGAACTAATCCAATCCAACTCTTACAATTTGGATTGAACAGTTTTCAGTTAGATTATTTTGCACTAATATTTAACATTTCATTGTATTAATTTATTTTAAAAATTTAATGATATATAATACATTTTAATATTTGTAAAAGGATAAATTCGGAGCATTATTTGTGCGGGAAAATAAATTATAATTTAGGCGCCACTTTAAGAAAAAAAAACCCTCTCAAAGTGCAAACCTACAAATGAATTAAACTTTGTTTGATTAATTTCATAAATGCAAACCTCAATCTCAATCTCAATCTCCATCTCCATCTCCCTCTCTCTCACCACCACCTTCGCCGCCGTATCCGATTAAAAGAGGTAATCTTCCGTAATCATAATTATATCATTAATAATGTTAGACGTACGTATTTAAATAATAATAATTAAGGTGAATTATGTACATAAACTAACCATTTATCTATTATTTTATTGAATGATCTATATAATCAACGTTAAATATTCCATGTATTAAATGGATAGAATCTATTCCTAGATTGATTAGGATTTAATGGAAACTAGTATATAAAGAAACTTAGGCTTTAGTCCTCAATATACTAAAATAGTAAATACTTAGTCTTTTCCTATCCGATTGAGCTGAGACACAATAGTCATTTTATAGTTGAGAAATTCTGAGCGAGACACAGTAGCCATTTTACTCGAAGATGGAATCAGGTATGTAATTTATTTTTGATAATTTGACATAATTGATATTGGATTAATTTATTACTGAATGTAAATATTTATAAATATGATTACAACAAATATAATTGAAATAACTAACAATTCAATGGAGAAGAAAAAGAATGTCATCGGATTCAACTAAAACCACGTTAGATTTCGTGGAGTTCTATTTGCTTTCAAAGAAAAAAAATTCTATTCAACTAAATAAATTTTCTATTGCATTATATCTTTTCCTAAATTTGTAATTAAATAACCGAAAGATATTTTCTTTGCCTGTTGTTGTGTAGCAACGAATTCTTCATGTGGTTATTTACCATTGCCATTGAATCATTACGTTGGCCTAAAATTTAGGCCTACTGATCAGCAACTTCTTCATTATCTTCATTGTAAGATTTATGGTCAGCCTTATTTTCAAGGAGCTGTTTTCGACTTTGATCTTTATGGTGGAGTCGAGCCATGGGAAATTTGGCAAAGTTTTGGAGGAATTGATGGCGAAGATCTTTACTTCTTCACTAAGCTCAAGAGGTCGACAACCAACTGTGGAAATTTGTCTACGCACGTTAACCGCAAGATTGGGCTCGTCAATGGTACTTGGAGTGGCGAGAATTCAGCTAGTCCAATTTATGTTAATGAAAACTGTGAAGAAATAATTGGTTATCGCAAGCGCTTTAGGTATGTGTTTGGTTTTTGTTAAACTATTCTCGATATATGTGTCATTGTTGAGTTTGTTTTAAGTTAATAGGAAATTGTCAAGGTATTTGTCTATTTGGTATTTTGTGATAAATGATATAACTTTTGTAAATTATAGGTATGAGAATGAGTCGTTGGAAGAACACCATGGTGAATGGATAATGCATGAATATAGCATGCATCAACGTTATTTGAGGTGTGAAGGGGTCGACTCCAATTATGTTTTATGTAGGATGAGGAAGAATGAAAGAGTTAAAAGAAAATTATTAGAAATTCAAGGTGAGGCGAAACAACCCAACAAGAAAAGAATAAAGGCACCTCATATTTCTGATAATGAAAGATGTGACGAGTTACAACCGATAGATCAAAGAGCAACAACATGTGAGACGATCTACAACTTGGATATCAGGCCTGATATGAATACTCATCAAGATATTAGTGTTGTGGACCGCGTGCCCAATATGACCACTAATCAAGATAACAGAAATGAAAACACTAGTTTGGGTATTGAAGATTATGTACCTTGCATGCCCGCTGACGACGAATTCAAAGATATTCGAACTTTAGATGAGTTTTGTACTTATATTCAAAACAACTTCGATGAGACATTATCTACTTTCAAAGTTTGA

mRNA sequence

ATGGACAGTAGTTCGAAGAGAGGTGTGCCAACGACAAGCAGAAACAAGGTTATTAGATCCTTAAGAAAGCCCAGCAAGAACCACATGTCAACGAATTCTTCATGTGGTTATTTACCATTGCCATTGAATCATTACGTTGGCCTAAAATTTAGGCCTACTGATCAGCAACTTCTTCATTATCTTCATTGTAAGATTTATGGTCAGCCTTATTTTCAAGGAGCTGTTTTCGACTTTGATCTTTATGGTGGAGTCGAGCCATGGGAAATTTGGCAAAGTTTTGGAGGAATTGATGGCGAAGATCTTTACTTCTTCACTAAGCTCAAGAGGTCGACAACCAACTGTGGAAATTTGTCTACGCACGTTAACCGCAAGATTGGGCTCGTCAATGGTACTTGGAGTGGCGAGAATTCAGCTAGTCCAATTTATGTTAATGAAAACTGTGAAGAAATAATTGGTTATCGCAAGCGCTTTAGGTATGAGAATGAGTCGTTGGAAGAACACCATGGTGAATGGATAATGCATGAATATAGCATGCATCAACGTTATTTGAGGTGTGAAGGGGTCGACTCCAATTATGTTTTATGTAGGATGAGGAAGAATGAAAGAGTTAAAAGAAAATTATTAGAAATTCAAGGTGAGGCGAAACAACCCAACAAGAAAAGAATAAAGGCACCTCATATTTCTGATAATGAAAGATGTGACGAGTTACAACCGATAGATCAAAGAGCAACAACATGTGAGACGATCTACAACTTGGATATCAGGCCTGATATGAATACTCATCAAGATATTAGTGTTGTGGACCGCGTGCCCAATATGACCACTAATCAAGATAACAGAAATGAAAACACTAGTTTGGGTATTGAAGATTATGTACCTTGCATGCCCGCTGACGACGAATTCAAAGATATTCGAACTTTAGATGAGTTTTGTACTTATATTCAAAACAACTTCGATGAGACATTATCTACTTTCAAAGTTTGA

Coding sequence (CDS)

ATGGACAGTAGTTCGAAGAGAGGTGTGCCAACGACAAGCAGAAACAAGGTTATTAGATCCTTAAGAAAGCCCAGCAAGAACCACATGTCAACGAATTCTTCATGTGGTTATTTACCATTGCCATTGAATCATTACGTTGGCCTAAAATTTAGGCCTACTGATCAGCAACTTCTTCATTATCTTCATTGTAAGATTTATGGTCAGCCTTATTTTCAAGGAGCTGTTTTCGACTTTGATCTTTATGGTGGAGTCGAGCCATGGGAAATTTGGCAAAGTTTTGGAGGAATTGATGGCGAAGATCTTTACTTCTTCACTAAGCTCAAGAGGTCGACAACCAACTGTGGAAATTTGTCTACGCACGTTAACCGCAAGATTGGGCTCGTCAATGGTACTTGGAGTGGCGAGAATTCAGCTAGTCCAATTTATGTTAATGAAAACTGTGAAGAAATAATTGGTTATCGCAAGCGCTTTAGGTATGAGAATGAGTCGTTGGAAGAACACCATGGTGAATGGATAATGCATGAATATAGCATGCATCAACGTTATTTGAGGTGTGAAGGGGTCGACTCCAATTATGTTTTATGTAGGATGAGGAAGAATGAAAGAGTTAAAAGAAAATTATTAGAAATTCAAGGTGAGGCGAAACAACCCAACAAGAAAAGAATAAAGGCACCTCATATTTCTGATAATGAAAGATGTGACGAGTTACAACCGATAGATCAAAGAGCAACAACATGTGAGACGATCTACAACTTGGATATCAGGCCTGATATGAATACTCATCAAGATATTAGTGTTGTGGACCGCGTGCCCAATATGACCACTAATCAAGATAACAGAAATGAAAACACTAGTTTGGGTATTGAAGATTATGTACCTTGCATGCCCGCTGACGACGAATTCAAAGATATTCGAACTTTAGATGAGTTTTGTACTTATATTCAAAACAACTTCGATGAGACATTATCTACTTTCAAAGTTTGA

Protein sequence

MDSSSKRGVPTTSRNKVIRSLRKPSKNHMSTNSSCGYLPLPLNHYVGLKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFTKLKRSTTNCGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEEIIGYRKRFRYENESLEEHHGEWIMHEYSMHQRYLRCEGVDSNYVLCRMRKNERVKRKLLEIQGEAKQPNKKRIKAPHISDNERCDELQPIDQRATTCETIYNLDIRPDMNTHQDISVVDRVPNMTTNQDNRNENTSLGIEDYVPCMPADDEFKDIRTLDEFCTYIQNNFDETLSTFKV*
Homology
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BLAST of Csa1G652300 vs. Swiss-Prot
Match: NAC83_ARATH (NAC domain-containing protein 83 OS=Arabidopsis thaliana GN=NAC083 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.0e-07
Identity = 58/215 (26.98%), Postives = 93/215 (43.26%), Query Frame = 1 

Query: 36  GYLPLPLNHYVGLKFRPTDQQLL-HYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFG 95
           G L LP     G +F PTD++L+  YL  K+   P     + +FD+    +PW++    G
Sbjct: 10  GVLRLP----PGFRFHPTDEELVVQYLKRKVCSSPLPASIIPEFDVCRA-DPWDLP---G 69

Query: 96  GIDGEDLYFFTKLKRSTTNCGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEEIIGYR 155
            ++ E  YFF+  +    N GN S   NR  G  +G W        + V     +I+G +
Sbjct: 70  NLEKER-YFFSTREAKYPN-GNRS---NRATG--SGYWKATGIDKRV-VTSRGNQIVGLK 129

Query: 156 KRFR-YENESLEEHHGEWIMHEYSMHQRYLRCEGVDSNYVLCRMRKNERVKRKLLEIQGE 215
           K    Y+ +       +WIMHEY +        G   N+VLCR+   +R   K  +  G+
Sbjct: 130 KTLVFYKGKPPHGSRTDWIMHEYRLSSSPPSSMGPTQNWVLCRIFLKKRAGNKNDDDDGD 189

Query: 216 AKQPNKKRIKAPHISDNERCDELQPIDQRATTCET 249
           ++          H ++N   D+++ I    T  +T
Sbjct: 190 SR-------NLRHNNNNNSSDQIEIITTDQTDDKT 201

[Close]
BLAST of Csa1G652300 vs. TrEMBL
Match: A0A0A0M0I5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G652300 PE=4 SV=1)

HSP 1 Score: 692.2 bits (1785), Expect = 3.1e-196
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 1 

Query: 1   MDSSSKRGVPTTSRNKVIRSLRKPSKNHMSTNSSCGYLPLPLNHYVGLKFRPTDQQLLHY 60
           MDSSSKRGVPTTSRNKVIRSLRKPSKNHMSTNSSCGYLPLPLNHYVGLKFRPTDQQLLHY
Sbjct: 1   MDSSSKRGVPTTSRNKVIRSLRKPSKNHMSTNSSCGYLPLPLNHYVGLKFRPTDQQLLHY 60

Query: 61  LHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFTKLKRSTTNCGNLSTH 120
           LHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFTKLKRSTTNCGNLSTH
Sbjct: 61  LHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFTKLKRSTTNCGNLSTH 120

Query: 121 VNRKIGLVNGTWSGENSASPIYVNENCEEIIGYRKRFRYENESLEEHHGEWIMHEYSMHQ 180
           VNRKIGLVNGTWSGENSASPIYVNENCEEIIGYRKRFRYENESLEEHHGEWIMHEYSMHQ
Sbjct: 121 VNRKIGLVNGTWSGENSASPIYVNENCEEIIGYRKRFRYENESLEEHHGEWIMHEYSMHQ 180

Query: 181 RYLRCEGVDSNYVLCRMRKNERVKRKLLEIQGEAKQPNKKRIKAPHISDNERCDELQPID 240
           RYLRCEGVDSNYVLCRMRKNERVKRKLLEIQGEAKQPNKKRIKAPHISDNERCDELQPID
Sbjct: 181 RYLRCEGVDSNYVLCRMRKNERVKRKLLEIQGEAKQPNKKRIKAPHISDNERCDELQPID 240

Query: 241 QRATTCETIYNLDIRPDMNTHQDISVVDRVPNMTTNQDNRNENTSLGIEDYVPCMPADDE 300
           QRATTCETIYNLDIRPDMNTHQDISVVDRVPNMTTNQDNRNENTSLGIEDYVPCMPADDE
Sbjct: 241 QRATTCETIYNLDIRPDMNTHQDISVVDRVPNMTTNQDNRNENTSLGIEDYVPCMPADDE 300

Query: 301 FKDIRTLDEFCTYIQNNFDETLSTFKV 328
           FKDIRTLDEFCTYIQNNFDETLSTFKV
Sbjct: 301 FKDIRTLDEFCTYIQNNFDETLSTFKV 327

[Close]
BLAST of Csa1G652300 vs. TrEMBL
Match: A0A0A0LFJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G838730 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 7.9e-144
Identity = 254/305 (83.28%), Postives = 267/305 (87.54%), Query Frame = 1 

Query: 32  NSSCGYLPLPLNHYVGLKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQ 91
           +SS G LPLPLNHYVG+KFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQ
Sbjct: 2   DSSSGSLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQ 61

Query: 92  SFGGIDGEDLYFFTKLKRSTTNCGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEEII 151
           SFGGIDGEDLYFFTKLKRSTTN GNLSTH+NRKIGLVNGTWSGENSASPIYVNE+ ++II
Sbjct: 62  SFGGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNEDDQQII 121

Query: 152 GYRKRFRYENESLEEHHGEWIMHEYSMHQRYLRCEGVDSNYVLCRMRKNERVKRKLLEIQ 211
           GYRKRFRYENES EEHHGEWIMHEY++H  YL CEGVD NYVLCR+R+NER +RK LEIQ
Sbjct: 122 GYRKRFRYENESSEEHHGEWIMHEYNLHPNYL-CEGVDPNYVLCRIRRNERARRK-LEIQ 181

Query: 212 GEAKQPNKKRIKAPHISDN--------ERCDELQPI-DQRATTCETIYNLDIRPDMNTHQ 271
           GE KQPNKKRIKAP IS N        ERCDELQPI DQRA TCETIYN DIR DM THQ
Sbjct: 182 GELKQPNKKRIKAPKISRNERPKAKTRERCDELQPIDDQRAITCETIYNSDIRHDMKTHQ 241

Query: 272 DISVVDRVPNMTTNQDNRNENTSLGIEDYVPCMPADDEFKDIRTLDEFCTYIQNNFDETL 328
           DISVVD +PNMTTNQDN NEN SLG EDY PCM  DDE KDI+TL EF TYIQNNFDETL
Sbjct: 242 DISVVDYLPNMTTNQDNINENISLGTEDYEPCMLTDDELKDIQTLGEFSTYIQNNFDETL 301

[Close]
BLAST of Csa1G652300 vs. TrEMBL
Match: A0A0A0KXM1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296900 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 1.2e-139
Identity = 242/306 (79.08%), Postives = 262/306 (85.62%), Query Frame = 1 

Query: 32  NSSCGYLPLPLNHYVGLKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQ 91
           +SS GYLPLPLNHYVG+KFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQ
Sbjct: 2   DSSSGYLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQ 61

Query: 92  SFGGIDGEDLYFFTKLKRSTTNCGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEEII 151
           SFGGIDGEDLYFFTKLKRSTTN GNLSTH+NRKIGLVNGTWSGENSASPIYVN++ E+II
Sbjct: 62  SFGGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQII 121

Query: 152 GYRKRFRYENESLEEHHGEWIMHEYSMHQRYLRCEGVDSNYVLCRMRKNERVKRKLLEIQ 211
           GYRKRFRYENESLEEHHGEWIMHEYS+H  YLRCEGVD NYVLCR+RKN+R KRK LE +
Sbjct: 122 GYRKRFRYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNQRAKRK-LETE 181

Query: 212 GEAKQPNKKRIKAPHISDNE----------RCDELQPIDQRATTCETIYNLDIRPDMNTH 271
            E KQ NKKR+K   IS+NE          RCDELQPIDQRA  CETIYN DIR D+NTH
Sbjct: 182 SELKQSNKKRMKVREISNNERPKAKTKTKKRCDELQPIDQRAIICETIYNSDIRHDVNTH 241

Query: 272 QDISVVDRVPNMTTNQDNRNENTSLGIEDYVPCMPADDEFKDIRTLDEFCTYIQNNFDET 328
           QDI+VVD VPNMTTNQDN NENTSLG ++YVPCM  D+E +D     +F TY QNNF+ET
Sbjct: 242 QDITVVDHVPNMTTNQDNINENTSLGTKEYVPCMSTDNELRDEFNNVDFSTYFQNNFNET 301

[Close]
BLAST of Csa1G652300 vs. TrEMBL
Match: M5XFT4_PRUPE (NAC78 OS=Prunus persica GN=PRUPE_ppa025721mg PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 7.7e-30
Identity = 86/189 (45.50%), Postives = 113/189 (59.79%), Query Frame = 1 

Query: 35  CGYLPLPLNHYVGLKFRPTDQQLL-HYLHCKIYGQPY-FQGAVFDFDLYGGVEPWEIWQS 94
           C Y+ +P    +G KF P+D +LL +YL  K+ G P+ +   V +F+LYG  EPW+IW  
Sbjct: 4   CEYVDVP----IGFKFHPSDDELLRYYLLNKVCGTPFMYSNVVPEFNLYGKKEPWDIWND 63

Query: 95  FGG---IDGEDLYFFTKLKRSTTNCGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEE 154
           FGG     GEDLYFFTKLK  T+  G+L   V R IG  NGTW GE+  + +       +
Sbjct: 64  FGGQKLEKGEDLYFFTKLKLVTSK-GSL---VARTIG--NGTWKGEDRGTMVGDPAKKNK 123

Query: 155 IIGYRKRFRYENESLEEHHGEWIMHEYSMHQRYLRCE------GVDSNYVLCRMRKNERV 213
            +G  KRFRYEN+   + HG WIMHEYS+H   ++        G D  YVLC++RKN+R 
Sbjct: 124 PLGLCKRFRYENDK-SDQHGRWIMHEYSLHPSLVKPHSNSNTCGGDGKYVLCQIRKNDR- 180

[Close]
BLAST of Csa1G652300 vs. TrEMBL
Match: A0A061FS95_THECC (Transcription factor-like protein OS=Theobroma cacao GN=TCM_044667 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.8e-29
Identity = 73/168 (43.45%), Postives = 104/168 (61.90%), Query Frame = 1 

Query: 45  YVGLKFRPTDQQLLHYLHCKIYGQP---YFQGAVFDFDLYGGVEPWEIWQSFGGID---G 104
           +VG  F P+D+ L+ YL  K+  +    + Q  + DFDLYG  EPWEIW  +GG +   G
Sbjct: 2   FVGFGFGPSDRSLMCYLFSKVTSKSMLHFDQDQIKDFDLYGEKEPWEIWDLYGGCNRQSG 61

Query: 105 EDLYFFTKLKRSTTNCGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEEIIGYRKRFR 164
           EDLYFFTKLK+ + N     + +NR +G+  GTW GE+S  PIY   +  + + ++KR R
Sbjct: 62  EDLYFFTKLKKKSQN----GSRINRSVGM--GTWMGEDSGKPIYSQLSAIQPLVFKKRLR 121

Query: 165 YENESLEEHHGEWIMHEYSMHQRYLRCEGVDSNYVLCRMRKNERVKRK 207
           YE   +    G+WIMHEYS++   +   G D  YVLCR+RKN+R ++K
Sbjct: 122 YEG-GVPHQVGQWIMHEYSLNT--VLVPGNDQGYVLCRLRKNDRDEKK 160

[Close]
BLAST of Csa1G652300 vs. TAIR10
Match: AT5G13180.1 (AT5G13180.1 NAC domain containing protein 83)

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-08
Identity = 58/215 (26.98%), Postives = 93/215 (43.26%), Query Frame = 1 

Query: 36  GYLPLPLNHYVGLKFRPTDQQLL-HYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFG 95
           G L LP     G +F PTD++L+  YL  K+   P     + +FD+    +PW++    G
Sbjct: 10  GVLRLP----PGFRFHPTDEELVVQYLKRKVCSSPLPASIIPEFDVCRA-DPWDLP---G 69

Query: 96  GIDGEDLYFFTKLKRSTTNCGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEEIIGYR 155
            ++ E  YFF+  +    N GN S   NR  G  +G W        + V     +I+G +
Sbjct: 70  NLEKER-YFFSTREAKYPN-GNRS---NRATG--SGYWKATGIDKRV-VTSRGNQIVGLK 129

Query: 156 KRFR-YENESLEEHHGEWIMHEYSMHQRYLRCEGVDSNYVLCRMRKNERVKRKLLEIQGE 215
           K    Y+ +       +WIMHEY +        G   N+VLCR+   +R   K  +  G+
Sbjct: 130 KTLVFYKGKPPHGSRTDWIMHEYRLSSSPPSSMGPTQNWVLCRIFLKKRAGNKNDDDDGD 189

Query: 216 AKQPNKKRIKAPHISDNERCDELQPIDQRATTCET 249
           ++          H ++N   D+++ I    T  +T
Sbjct: 190 SR-------NLRHNNNNNSSDQIEIITTDQTDDKT 201

[Close]
BLAST of Csa1G652300 vs. NCBI nr
Match: gi|700211551|gb|KGN66647.1| (hypothetical protein Csa_1G652300 [Cucumis sativus])

HSP 1 Score: 692.2 bits (1785), Expect = 4.4e-196
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 1 

Query: 1   MDSSSKRGVPTTSRNKVIRSLRKPSKNHMSTNSSCGYLPLPLNHYVGLKFRPTDQQLLHY 60
           MDSSSKRGVPTTSRNKVIRSLRKPSKNHMSTNSSCGYLPLPLNHYVGLKFRPTDQQLLHY
Sbjct: 1   MDSSSKRGVPTTSRNKVIRSLRKPSKNHMSTNSSCGYLPLPLNHYVGLKFRPTDQQLLHY 60

Query: 61  LHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFTKLKRSTTNCGNLSTH 120
           LHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFTKLKRSTTNCGNLSTH
Sbjct: 61  LHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFTKLKRSTTNCGNLSTH 120

Query: 121 VNRKIGLVNGTWSGENSASPIYVNENCEEIIGYRKRFRYENESLEEHHGEWIMHEYSMHQ 180
           VNRKIGLVNGTWSGENSASPIYVNENCEEIIGYRKRFRYENESLEEHHGEWIMHEYSMHQ
Sbjct: 121 VNRKIGLVNGTWSGENSASPIYVNENCEEIIGYRKRFRYENESLEEHHGEWIMHEYSMHQ 180

Query: 181 RYLRCEGVDSNYVLCRMRKNERVKRKLLEIQGEAKQPNKKRIKAPHISDNERCDELQPID 240
           RYLRCEGVDSNYVLCRMRKNERVKRKLLEIQGEAKQPNKKRIKAPHISDNERCDELQPID
Sbjct: 181 RYLRCEGVDSNYVLCRMRKNERVKRKLLEIQGEAKQPNKKRIKAPHISDNERCDELQPID 240

Query: 241 QRATTCETIYNLDIRPDMNTHQDISVVDRVPNMTTNQDNRNENTSLGIEDYVPCMPADDE 300
           QRATTCETIYNLDIRPDMNTHQDISVVDRVPNMTTNQDNRNENTSLGIEDYVPCMPADDE
Sbjct: 241 QRATTCETIYNLDIRPDMNTHQDISVVDRVPNMTTNQDNRNENTSLGIEDYVPCMPADDE 300

Query: 301 FKDIRTLDEFCTYIQNNFDETLSTFKV 328
           FKDIRTLDEFCTYIQNNFDETLSTFKV
Sbjct: 301 FKDIRTLDEFCTYIQNNFDETLSTFKV 327

[Close]
BLAST of Csa1G652300 vs. NCBI nr
Match: gi|449442783|ref|XP_004139160.1| (PREDICTED: NAC domain-containing protein 66-like [Cucumis sativus])

HSP 1 Score: 634.8 bits (1636), Expect = 8.4e-179
Identity = 297/298 (99.66%), Postives = 298/298 (100.00%), Query Frame = 1 

Query: 30  STNSSCGYLPLPLNHYVGLKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEI 89
           +TNSSCGYLPLPLNHYVGLKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEI
Sbjct: 4   ATNSSCGYLPLPLNHYVGLKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEI 63

Query: 90  WQSFGGIDGEDLYFFTKLKRSTTNCGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEE 149
           WQSFGGIDGEDLYFFTKLKRSTTNCGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEE
Sbjct: 64  WQSFGGIDGEDLYFFTKLKRSTTNCGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEE 123

Query: 150 IIGYRKRFRYENESLEEHHGEWIMHEYSMHQRYLRCEGVDSNYVLCRMRKNERVKRKLLE 209
           IIGYRKRFRYENESLEEHHGEWIMHEYSMHQRYLRCEGVDSNYVLCRMRKNERVKRKLLE
Sbjct: 124 IIGYRKRFRYENESLEEHHGEWIMHEYSMHQRYLRCEGVDSNYVLCRMRKNERVKRKLLE 183

Query: 210 IQGEAKQPNKKRIKAPHISDNERCDELQPIDQRATTCETIYNLDIRPDMNTHQDISVVDR 269
           IQGEAKQPNKKRIKAPHISDNERCDELQPIDQRATTCETIYNLDIRPDMNTHQDISVVDR
Sbjct: 184 IQGEAKQPNKKRIKAPHISDNERCDELQPIDQRATTCETIYNLDIRPDMNTHQDISVVDR 243

Query: 270 VPNMTTNQDNRNENTSLGIEDYVPCMPADDEFKDIRTLDEFCTYIQNNFDETLSTFKV 328
           VPNMTTNQDNRNENTSLGIEDYVPCMPADDEFKDIRTLDEFCTYIQNNFDETLSTFKV
Sbjct: 244 VPNMTTNQDNRNENTSLGIEDYVPCMPADDEFKDIRTLDEFCTYIQNNFDETLSTFKV 301

[Close]
BLAST of Csa1G652300 vs. NCBI nr
Match: gi|778688961|ref|XP_011652873.1| (PREDICTED: NAC domain-containing protein 102-like [Cucumis sativus])

HSP 1 Score: 518.1 bits (1333), Expect = 1.1e-143
Identity = 254/305 (83.28%), Postives = 267/305 (87.54%), Query Frame = 1 

Query: 32  NSSCGYLPLPLNHYVGLKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQ 91
           +SS G LPLPLNHYVG+KFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQ
Sbjct: 2   DSSSGSLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQ 61

Query: 92  SFGGIDGEDLYFFTKLKRSTTNCGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEEII 151
           SFGGIDGEDLYFFTKLKRSTTN GNLSTH+NRKIGLVNGTWSGENSASPIYVNE+ ++II
Sbjct: 62  SFGGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNEDDQQII 121

Query: 152 GYRKRFRYENESLEEHHGEWIMHEYSMHQRYLRCEGVDSNYVLCRMRKNERVKRKLLEIQ 211
           GYRKRFRYENES EEHHGEWIMHEY++H  YL CEGVD NYVLCR+R+NER +RK LEIQ
Sbjct: 122 GYRKRFRYENESSEEHHGEWIMHEYNLHPNYL-CEGVDPNYVLCRIRRNERARRK-LEIQ 181

Query: 212 GEAKQPNKKRIKAPHISDN--------ERCDELQPI-DQRATTCETIYNLDIRPDMNTHQ 271
           GE KQPNKKRIKAP IS N        ERCDELQPI DQRA TCETIYN DIR DM THQ
Sbjct: 182 GELKQPNKKRIKAPKISRNERPKAKTRERCDELQPIDDQRAITCETIYNSDIRHDMKTHQ 241

Query: 272 DISVVDRVPNMTTNQDNRNENTSLGIEDYVPCMPADDEFKDIRTLDEFCTYIQNNFDETL 328
           DISVVD +PNMTTNQDN NEN SLG EDY PCM  DDE KDI+TL EF TYIQNNFDETL
Sbjct: 242 DISVVDYLPNMTTNQDNINENISLGTEDYEPCMLTDDELKDIQTLGEFSTYIQNNFDETL 301

[Close]
BLAST of Csa1G652300 vs. NCBI nr
Match: gi|449448878|ref|XP_004142192.1| (PREDICTED: NAC transcription factor 29-like [Cucumis sativus])

HSP 1 Score: 504.2 bits (1297), Expect = 1.7e-139
Identity = 242/306 (79.08%), Postives = 262/306 (85.62%), Query Frame = 1 

Query: 32  NSSCGYLPLPLNHYVGLKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQ 91
           +SS GYLPLPLNHYVG+KFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQ
Sbjct: 2   DSSSGYLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQ 61

Query: 92  SFGGIDGEDLYFFTKLKRSTTNCGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEEII 151
           SFGGIDGEDLYFFTKLKRSTTN GNLSTH+NRKIGLVNGTWSGENSASPIYVN++ E+II
Sbjct: 62  SFGGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQII 121

Query: 152 GYRKRFRYENESLEEHHGEWIMHEYSMHQRYLRCEGVDSNYVLCRMRKNERVKRKLLEIQ 211
           GYRKRFRYENESLEEHHGEWIMHEYS+H  YLRCEGVD NYVLCR+RKN+R KRK LE +
Sbjct: 122 GYRKRFRYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNQRAKRK-LETE 181

Query: 212 GEAKQPNKKRIKAPHISDNE----------RCDELQPIDQRATTCETIYNLDIRPDMNTH 271
            E KQ NKKR+K   IS+NE          RCDELQPIDQRA  CETIYN DIR D+NTH
Sbjct: 182 SELKQSNKKRMKVREISNNERPKAKTKTKKRCDELQPIDQRAIICETIYNSDIRHDVNTH 241

Query: 272 QDISVVDRVPNMTTNQDNRNENTSLGIEDYVPCMPADDEFKDIRTLDEFCTYIQNNFDET 328
           QDI+VVD VPNMTTNQDN NENTSLG ++YVPCM  D+E +D     +F TY QNNF+ET
Sbjct: 242 QDITVVDHVPNMTTNQDNINENTSLGTKEYVPCMSTDNELRDEFNNVDFSTYFQNNFNET 301

[Close]
BLAST of Csa1G652300 vs. NCBI nr
Match: gi|659085698|ref|XP_008443554.1| (PREDICTED: protein SOMBRERO-like [Cucumis melo])

HSP 1 Score: 424.9 bits (1091), Expect = 1.3e-115
Identity = 211/296 (71.28%), Postives = 237/296 (80.07%), Query Frame = 1 

Query: 32  NSSCGYLPLPLNHYVGLKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQ 91
           +SS GYLPLP +H VG+KFRPTDQQLL YL CKIY QPYFQGAVFDFDLYGG+EPWEIWQ
Sbjct: 2   DSSSGYLPLPFSHCVGVKFRPTDQQLLRYLCCKIYDQPYFQGAVFDFDLYGGIEPWEIWQ 61

Query: 92  SFGGIDGEDLYFFTKLKRSTTNCGNLSTHVNRKIGLVNGTWSGENSASPIYVNE-NCEEI 151
           SF GIDGEDLYFFTKLKRSTTN GNLSTH+NRKIG  NGTWSGENSA+PIY NE + E+I
Sbjct: 62  SFKGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGSANGTWSGENSATPIYANEDDHEQI 121

Query: 152 IGYRKRFRYENESLEEHHGEWIMHEYSMHQRYLRCEGVDSNYVLCRMRKNERVKRKLLEI 211
           IGYRKRFRYEN+ L+EHHGEWIMHEYS+HQ +L+C+GVD NYVLCR+RKNER KRK L++
Sbjct: 122 IGYRKRFRYENDQLQEHHGEWIMHEYSLHQDHLKCQGVDPNYVLCRIRKNERAKRK-LKV 181

Query: 212 QGEAKQPNKKRIKAPHISDNERCDELQPIDQRATTCETIYNLDIRPDMNTHQDISVVDRV 271
           Q E KQPNKKRI AP        D+LQPI+    T ETIYN +I  DM THQD SVVD V
Sbjct: 182 QRELKQPNKKRIMAP--------DQLQPINHGVITRETIYNSNIMHDMTTHQDTSVVDHV 241

Query: 272 PNMTTNQDNRNENTSLGIEDYVPCMPADDEFKDIRTLDE-----FCTYIQNNFDET 322
            NMTTNQDN N +TSLG    + C P +DE+KDI  LDE     F +Y+ NNFDET
Sbjct: 242 TNMTTNQDNTNASTSLGAL-CLTCTPTNDEWKDIINLDELDDIDFSSYVPNNFDET 287

The following BLAST results are available for this feature:
BLAST of Csa1G652300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NAC83_ARATH2.0e-0726.98NAC domain-containing protein 83 OS=Arabidopsis thaliana GN=NAC083 PE=1 SV=1[more]
BLAST of Csa1G652300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M0I5_CUCSA3.1e-196100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G652300 PE=4 SV=1[more]
A0A0A0LFJ5_CUCSA7.9e-14483.28Uncharacterized protein OS=Cucumis sativus GN=Csa_3G838730 PE=4 SV=1[more]
A0A0A0KXM1_CUCSA1.2e-13979.08Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296900 PE=4 SV=1[more]
M5XFT4_PRUPE7.7e-3045.50NAC78 OS=Prunus persica GN=PRUPE_ppa025721mg PE=2 SV=1[more]
A0A061FS95_THECC3.8e-2943.45Transcription factor-like protein OS=Theobroma cacao GN=TCM_044667 PE=4 SV=1[more]
BLAST of Csa1G652300 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G13180.11.1e-0826.98 NAC domain containing protein 83[more]
BLAST of Csa1G652300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211551|gb|KGN66647.1|4.4e-196100.00hypothetical protein Csa_1G652300 [Cucumis sativus][more]
gi|449442783|ref|XP_004139160.1|8.4e-17999.66PREDICTED: NAC domain-containing protein 66-like [Cucumis sativus][more]
gi|778688961|ref|XP_011652873.1|1.1e-14383.28PREDICTED: NAC domain-containing protein 102-like [Cucumis sativus][more]
gi|449448878|ref|XP_004142192.1|1.7e-13979.08PREDICTED: NAC transcription factor 29-like [Cucumis sativus][more]
gi|659085698|ref|XP_008443554.1|1.3e-11571.28PREDICTED: protein SOMBRERO-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003441NAC-dom
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G652300.1Csa1G652300.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003441NAC domainPFAMPF02365NAMcoord: 46..177
score: 1.1
IPR003441NAC domainPROFILEPS51005NACcoord: 44..200
score: 22
IPR003441NAC domainunknownSSF101941NAC domaincoord: 42..199
score: 1.03
NoneNo IPR availablePANTHERPTHR31719FAMILY NOT NAMEDcoord: 46..283
score: 2.2
NoneNo IPR availablePANTHERPTHR31719:SF10SUBFAMILY NOT NAMEDcoord: 46..283
score: 2.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G652300CSPI01G32040Wild cucumber (PI 183967)cpicuB001
Csa1G652300CsGy1G031050Cucumber (Gy14) v2cgybcuB002
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G652300Silver-seed gourdcarcuB0565
Csa1G652300Silver-seed gourdcarcuB0982
Csa1G652300Watermelon (97103) v2cuwmbB035
Csa1G652300Wax gourdcuwgoB110
Csa1G652300Cucumber (Gy14) v1cgycuB500
Csa1G652300Cucurbita maxima (Rimu)cmacuB057
Csa1G652300Cucurbita maxima (Rimu)cmacuB085
Csa1G652300Cucurbita moschata (Rifu)cmocuB075
Csa1G652300Cucurbita moschata (Rifu)cmocuB047
Csa1G652300Melon (DHL92) v3.5.1cumeB043
Csa1G652300Watermelon (Charleston Gray)cuwcgB038
Csa1G652300Watermelon (97103) v1cuwmB011
Csa1G652300Cucurbita pepo (Zucchini)cpecuB000
Csa1G652300Cucurbita pepo (Zucchini)cpecuB349
Csa1G652300Bottle gourd (USVL1VR-Ls)culsiB058
Csa1G652300Melon (DHL92) v3.6.1cumedB035