Csa1G614140 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G614140
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionJHL23C09.7 protein
LocationChr1 : 24199691 .. 24200907 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGTGACACTCCTATAAAGGTGGTATTGATTTCTTCAAATTTGAACCACCACACATTGCATCCAAAAATATATATTTCTGTAGTGTTCCTTAGCATATTTTGTTTGTGTTCAAAGAAGCCAAATATCGAAAGAGGTACACTGTTATTTTGATTATCGGTTCTTCGTCTCTCAAGAAGGAAAAAAACAATGTCACTCTTTTTTAAGTCTTGCAGCTCCAAGAATTTTGTTGGTGATCATTCATTAGAAGAAGAAGAATATGTTGAAAAAGGTAAAAGTTTAGTGAAATGGAAGATGCCAAGAGTCCCAATCCACAAAATCTATGAAGAAAGAAGAAAGAACCACTTTTTTATTTTTCCTTCAAAGAATGATCCTTCCATCAGAACCACAGAAGGCCAAATTAGCTTTGGCAATGAAGGAGGATCTTTTAAATTATATGGTCAAACCCCTTCAAGTTATTGTAGAAGAAGAAGAATCTCATTCTTCAACACAATGAACATAGGCCTTGTTCAAATTGGTGTCAAAACCCTAACCAAAAAAATCCCTCCAAATGCTTCCATAATTTTATGTCTACGTGACAATAGAATTGAAAAACTTGAAGATTCACTACTTGCTTTAGTTGAATCAAAGTTAGGAGATGGTCCATTTTATTTCAATGTTTTCCCAAACATAAATTTGTCTTTGTTTTTTTCATCAATCACTAATGTTTTGAGTGTCCACGTTTTGGTAAAAGGGCTTGATAAAATTCCAAAAGGGAGTGCCCCAATTGTGGTGACATGTAGAACATGTTACAAGTTGAACCAAAACGATTTTGGATCAGAAGCTTTGATTGAGAGTCCTGTTGGGAAAACAGTGTTTTTTCAGATAGAGATTTTTGAAGATGATGATGATGATGTTGTTCAAAAAGTTACTATGTGGAATCAAGTTCAATTGCCTTCTGATTGGCCTCCTCGGCTGCATATACCTACGGTCCCTAGGTTGGTTTTTGGTTCTTCAAAAGAGGCTCAAGTAAGTAACTAATTAAGGTGTGTTCTTGTTTAATTACTTTGGTAATGAGAGGATGAAATTTATATATTTTGTGTGGGTGTGTGTGCTTGTTTTGAGAGAAGAAAGGTGTGGAAGAAATGTGTATAATATACGGTCTTTGGATCCATGTATTGCTATGTGTTTTTATATGTATTAATAAAAGCTATATGTATTCCTTATTCTATGGATGGAT

mRNA sequence

ATGCCAAGAGTCCCAATCCACAAAATCTATGAAGAAAGAAGAAAGAACCACTTTTTTATTTTTCCTTCAAAGAATGATCCTTCCATCAGAACCACAGAAGGCCAAATTAGCTTTGGCAATGAAGGAGGATCTTTTAAATTATATGGTCAAACCCCTTCAAGTTATTGTAGAAGAAGAAGAATCTCATTCTTCAACACAATGAACATAGGCCTTGTTCAAATTGGTGTCAAAACCCTAACCAAAAAAATCCCTCCAAATGCTTCCATAATTTTATGTCTACGTGACAATAGAATTGAAAAACTTGAAGATTCACTACTTGCTTTAGTTGAATCAAAGTTAGGAGATGGTCCATTTTATTTCAATGTTTTCCCAAACATAAATTTGTCTTTGTTTTTTTCATCAATCACTAATGTTTTGAGTGTCCACGTTTTGGTAAAAGGGCTTGATAAAATTCCAAAAGGGAGTGCCCCAATTGTGGTGACATGTAGAACATGTTACAAGTTGAACCAAAACGATTTTGGATCAGAAGCTTTGATTGAGAGTCCTGTTGGGAAAACAGTGTTTTTTCAGATAGAGATTTTTGAAGATGATGATGATGATGTTGTTCAAAAAGTTACTATGTGGAATCAAGTTCAATTGCCTTCTGATTGGCCTCCTCGGCTGCATATACCTACGGTCCCTAGGTTGGTTTTTGGTTCTTCAAAAGAGGCTCAAGTAAGTAACTAA

Coding sequence (CDS)

ATGCCAAGAGTCCCAATCCACAAAATCTATGAAGAAAGAAGAAAGAACCACTTTTTTATTTTTCCTTCAAAGAATGATCCTTCCATCAGAACCACAGAAGGCCAAATTAGCTTTGGCAATGAAGGAGGATCTTTTAAATTATATGGTCAAACCCCTTCAAGTTATTGTAGAAGAAGAAGAATCTCATTCTTCAACACAATGAACATAGGCCTTGTTCAAATTGGTGTCAAAACCCTAACCAAAAAAATCCCTCCAAATGCTTCCATAATTTTATGTCTACGTGACAATAGAATTGAAAAACTTGAAGATTCACTACTTGCTTTAGTTGAATCAAAGTTAGGAGATGGTCCATTTTATTTCAATGTTTTCCCAAACATAAATTTGTCTTTGTTTTTTTCATCAATCACTAATGTTTTGAGTGTCCACGTTTTGGTAAAAGGGCTTGATAAAATTCCAAAAGGGAGTGCCCCAATTGTGGTGACATGTAGAACATGTTACAAGTTGAACCAAAACGATTTTGGATCAGAAGCTTTGATTGAGAGTCCTGTTGGGAAAACAGTGTTTTTTCAGATAGAGATTTTTGAAGATGATGATGATGATGTTGTTCAAAAAGTTACTATGTGGAATCAAGTTCAATTGCCTTCTGATTGGCCTCCTCGGCTGCATATACCTACGGTCCCTAGGTTGGTTTTTGGTTCTTCAAAAGAGGCTCAAGTAAGTAACTAA

Protein sequence

MPRVPIHKIYEERRKNHFFIFPSKNDPSIRTTEGQISFGNEGGSFKLYGQTPSSYCRRRRISFFNTMNIGLVQIGVKTLTKKIPPNASIILCLRDNRIEKLEDSLLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVLVKGLDKIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFEDDDDDVVQKVTMWNQVQLPSDWPPRLHIPTVPRLVFGSSKEAQVSN*
Homology
[Close]
BLAST of Csa1G614140 vs. TrEMBL
Match: A0A0A0LXM3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G614140 PE=4 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 5.3e-157
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 1 

Query: 1   MSLFFKSCSSKNFVGDHSLEEEEYVEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSKN 60
           MSLFFKSCSSKNFVGDHSLEEEEYVEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSKN
Sbjct: 1   MSLFFKSCSSKNFVGDHSLEEEEYVEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSKN 60

Query: 61  DPSIRTTEGQISFGNEGGSFKLYGQTPSSYCRRRRISFFNTMNIGLVQIGVKTLTKKIPP 120
           DPSIRTTEGQISFGNEGGSFKLYGQTPSSYCRRRRISFFNTMNIGLVQIGVKTLTKKIPP
Sbjct: 61  DPSIRTTEGQISFGNEGGSFKLYGQTPSSYCRRRRISFFNTMNIGLVQIGVKTLTKKIPP 120

Query: 121 NASIILCLRDNRIEKLEDSLLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVLV 180
           NASIILCLRDNRIEKLEDSLLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVLV
Sbjct: 121 NASIILCLRDNRIEKLEDSLLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVLV 180

Query: 181 KGLDKIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFEDDDDDVVQKV 240
           KGLDKIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFEDDDDDVVQKV
Sbjct: 181 KGLDKIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFEDDDDDVVQKV 240

Query: 241 TMWNQVQLPSDWPPRLHIPTVPRLVFGSSKEAQVSN 277
           TMWNQVQLPSDWPPRLHIPTVPRLVFGSSKEAQVSN
Sbjct: 241 TMWNQVQLPSDWPPRLHIPTVPRLVFGSSKEAQVSN 276

[Close]
BLAST of Csa1G614140 vs. TrEMBL
Match: A0A0A0LZS0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G614640 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.2e-47
Identity = 110/242 (45.45%), Postives = 154/242 (63.64%), Query Frame = 1 

Query: 8   CSSKNFVG-DHSLEEEEYVEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSKNDPSIRT 67
           C S NF G  HSL+ EEY++KGK+L+KWK+P++P  KIY   + N F  F   +DP I+T
Sbjct: 5   CWSSNFGGGSHSLDSEEYIKKGKNLLKWKIPKIPTTKIY---KSNPFIFF---SDPFIKT 64

Query: 68  TEGQISFGNEGGSFKLYGQTP--SSYCRRRRISFFNTMNIGLVQIGVKTLTKKIPPNASI 127
            E  +   N    F+L    P   ++  +R   F+  +N+G++QIGVKTLT KIP NASI
Sbjct: 65  KEETMPCENGSQVFRLISGNPMVDNFQEKR---FYTRLNMGMIQIGVKTLTTKIPSNASI 124

Query: 128 ILCLRDNRIEKLEDSLLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVLVKGLD 187
           ILC+ D R +  EDS+L LVESKL DGP +FN+FPNI + +F   +     +  +V+G +
Sbjct: 125 ILCVFDTRNDNFEDSILGLVESKLIDGPIFFNIFPNITMPIFHPKLLESFVLIAMVQGFE 184

Query: 188 KIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFEDDDDDVVQKVTMWN 247
           ++P+G++PI +  RTCYKL  +   + ALIESP GKTVFFQ         D  QKV+ W+
Sbjct: 185 QLPQGTSPISLMWRTCYKLQASALPT-ALIESPQGKTVFFQTNFENSKVAD--QKVSQWD 234

[Close]
BLAST of Csa1G614140 vs. TrEMBL
Match: A5C0V2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001866 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.4e-24
Identity = 73/242 (30.17%), Postives = 122/242 (50.41%), Query Frame = 1 

Query: 20  EEEEYVEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSKNDPSIRTTEGQISFGNEGGS 79
           EE  Y +    L  WK+P+V   +IY   +K  F  F    D +I+T+E  +S   +   
Sbjct: 16  EEINYPKIQNDLDDWKLPKVSNQEIY---KKGTFKFF---TDYTIKTSEMSVSLEQDDQV 75

Query: 80  FKLYGQTPSSYCRRRRISFFNTMNIGLVQIGVKTLTKKIPPNASIILCLRDNRIEKLEDS 139
            +L         +R     +N ++ G++Q+  K LT+ +  N SI++CLRDNR  +  DS
Sbjct: 76  IRLLDNRSIDKHKR---DGYNFIHFGMIQVAAKPLTR-LGLNTSIVMCLRDNRHLEYRDS 135

Query: 140 LLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVLVKGLDKIPKGSAPIVVTCRT 199
           ++  V++ L DGP YF  +PN  + +  + I + + +H+   G  KI  G++P+ +  R 
Sbjct: 136 IIGAVQAGLNDGPVYFQCYPNFTVRIRDADILDSVVLHIKTHGF-KIKPGNSPVSIITRF 195

Query: 200 CYKLNQNDFGSEALIESPVGKTVFFQIEIFEDDDDDVVQKVTMWNQVQLPSDWPPRLHIP 259
            YK      GS AL  SP G+T +F  ++  D  D ++ K  +W  V  P +W     +P
Sbjct: 196 AYKSMNTSVGSGALCTSPKGETTYFHSDML-DKSDFIIPKKILWKDVDFPENWHFANAVP 245

Query: 260 TV 262
            +
Sbjct: 256 AI 245

[Close]
BLAST of Csa1G614140 vs. TrEMBL
Match: A5BNN5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021290 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.1e-24
Identity = 72/242 (29.75%), Postives = 122/242 (50.41%), Query Frame = 1 

Query: 20   EEEEYVEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSKNDPSIRTTEGQISFGNEGGS 79
            EE  Y +    L  WK+P+V   +IY   +K  F  F    D +I+T+E  +S   +   
Sbjct: 1452 EEINYPKIQNDLDDWKLPKVSNQEIY---KKGTFKFF---TDYTIKTSEMTVSLEQDDQV 1511

Query: 80   FKLYGQTPSSYCRRRRISFFNTMNIGLVQIGVKTLTKKIPPNASIILCLRDNRIEKLEDS 139
             +L          + +   +N ++ G++Q+  K LT+ +  N +I++CLRDNR  +  DS
Sbjct: 1512 IRLLDNRS---VEKHKKDGYNFIHFGMIQVAAKPLTR-LGLNTAIVMCLRDNRHLEYRDS 1571

Query: 140  LLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVLVKGLDKIPKGSAPIVVTCRT 199
            ++  V++ L DGP YF  +PN  + L  + I + + +H+   G  KI  G++P+ +  R 
Sbjct: 1572 IIGAVQAGLNDGPVYFQCYPNFTVRLRDADILDSVVLHIKTHGF-KIKPGNSPVSIITRF 1631

Query: 200  CYKLNQNDFGSEALIESPVGKTVFFQIEIFEDDDDDVVQKVTMWNQVQLPSDWPPRLHIP 259
             YK      GS AL  SP G+T +F  ++  D  D ++ K  +W  V  P +W     +P
Sbjct: 1632 AYKSMNTSVGSGALCTSPKGETTYFHSDML-DKSDFIIPKKILWKDVDFPENWHFANAVP 1681

Query: 260  TV 262
             +
Sbjct: 1692 AI 1681

[Close]
BLAST of Csa1G614140 vs. TrEMBL
Match: A5BNN5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021290 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.1e-24
Identity = 72/242 (29.75%), Postives = 122/242 (50.41%), Query Frame = 1 

Query: 20   EEEEYVEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSKNDPSIRTTEGQISFGNEGGS 79
            EE  Y +    L  WK+P+V   +IY   +K  F  F    D +I+T+E  +S   +   
Sbjct: 3154 EEINYPKIQNDLDDWKLPKVSNQEIY---KKGTFKFF---TDYTIKTSEMTVSLEQDDQV 3213

Query: 80   FKLYGQTPSSYCRRRRISFFNTMNIGLVQIGVKTLTKKIPPNASIILCLRDNRIEKLEDS 139
             +L          + +   +N ++ G++Q+  K LT+ +  N +I++CLRDNR  +  DS
Sbjct: 3214 IRLLDNRS---VEKHKKDGYNFIHFGMIQVAAKPLTR-LGLNTAIVMCLRDNRHLEYRDS 3273

Query: 140  LLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVLVKGLDKIPKGSAPIVVTCRT 199
            ++  V++ L DGP YF  +PN  + L  + I + + +H+   G  KI  G++P+ +  R 
Sbjct: 3274 IIGAVQAGLNDGPVYFQCYPNFTVRLRDADILDSVVLHIKTHGF-KIKPGNSPVSIITRF 3333

Query: 200  CYKLNQNDFGSEALIESPVGKTVFFQIEIFEDDDDDVVQKVTMWNQVQLPSDWPPRLHIP 259
             YK      GS AL  SP G+T +F  ++  D  D ++ K  +W  V  P +W     +P
Sbjct: 3334 AYKSMNTSVGSGALCTSPKGETTYFHSDML-DKSDFIIPKKILWKDVDFPENWHFANAVP 3383

Query: 260  TV 262
             +
Sbjct: 3394 AI 3383


HSP 2 Score: 82.8 bits (203), Expect = 7.2e-13
Identity = 42/119 (35.29%), Postives = 69/119 (57.98%), Query Frame = 1 

Query: 99  FNTMNIGLVQIGVKTLTKKIPPNASIILCLRDNRIEKLEDSLLALVESKLGDGPFYFNVF 158
           +N ++ G++Q+  K LT+ +  N +I++CLRDNR  +  DS++  V++ L DGP YF  +
Sbjct: 28  YNFIHFGMIQVAAKPLTR-LGLNTAIVMCLRDNRHLEYRDSIIGAVQAGLNDGPVYFQCY 87

Query: 159 PNINLSLFFSSITNVLSVHVLVKGLDKIPKGSAPIVVTCRTCYKLNQNDFGSEALIESP 218
           PN  + L  + I + + +H+   G  KI  G++P+ +  R  YK      GS AL  SP
Sbjct: 88  PNFTVRLRDADILDSVVLHIKTHGF-KIKPGNSPVSIITRFAYKSMNTSVGSGALCTSP 144


HSP 3 Score: 120.2 bits (300), Expect = 4.1e-24
Identity = 72/242 (29.75%), Postives = 122/242 (50.41%), Query Frame = 1 

Query: 20  EEEEYVEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSKNDPSIRTTEGQISFGNEGGS 79
           EE  Y +    L  WK+P+V   +IY   +K  F  F    D +I+T+E  +S   +   
Sbjct: 16  EEINYPKIQNDLDDWKLPKVSNQEIY---KKGTFKFF---TDYTIKTSEMTVSLEQDDQV 75

Query: 80  FKLYGQTPSSYCRRRRISFFNTMNIGLVQIGVKTLTKKIPPNASIILCLRDNRIEKLEDS 139
            +L          + +   +N ++ G++Q+  K LT+ +  N +I++CLRDNR  +  DS
Sbjct: 76  IRLLDNRS---VEKHKKDGYNFIHFGMIQVAAKPLTR-LGLNTAIVMCLRDNRHLEYRDS 135

Query: 140 LLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVLVKGLDKIPKGSAPIVVTCRT 199
           ++  V++ L DGP YF  +PN  + L  + I + + +H+   G  KI  G++P+ +  R 
Sbjct: 136 IIGAVQAGLNDGPVYFQCYPNFTVRLRDADILDSVVLHIKTHGF-KIKPGNSPVSIITRF 195

Query: 200 CYKLNQNDFGSEALIESPVGKTVFFQIEIFEDDDDDVVQKVTMWNQVQLPSDWPPRLHIP 259
            YK      GS AL  SP G+T +F  ++  D  D ++ K  +W  V  P +W     +P
Sbjct: 196 AYKSMNTSVGSGALCTSPKGETTYFHSDML-DKSDFIIPKKILWKDVDFPENWHFANAVP 245

Query: 260 TV 262
            +
Sbjct: 256 AI 245

[Close]
BLAST of Csa1G614140 vs. NCBI nr
Match: gi|700211397|gb|KGN66493.1| (hypothetical protein Csa_1G614140 [Cucumis sativus])

HSP 1 Score: 561.6 bits (1446), Expect = 7.6e-157
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 1 

Query: 1   MSLFFKSCSSKNFVGDHSLEEEEYVEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSKN 60
           MSLFFKSCSSKNFVGDHSLEEEEYVEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSKN
Sbjct: 1   MSLFFKSCSSKNFVGDHSLEEEEYVEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSKN 60

Query: 61  DPSIRTTEGQISFGNEGGSFKLYGQTPSSYCRRRRISFFNTMNIGLVQIGVKTLTKKIPP 120
           DPSIRTTEGQISFGNEGGSFKLYGQTPSSYCRRRRISFFNTMNIGLVQIGVKTLTKKIPP
Sbjct: 61  DPSIRTTEGQISFGNEGGSFKLYGQTPSSYCRRRRISFFNTMNIGLVQIGVKTLTKKIPP 120

Query: 121 NASIILCLRDNRIEKLEDSLLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVLV 180
           NASIILCLRDNRIEKLEDSLLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVLV
Sbjct: 121 NASIILCLRDNRIEKLEDSLLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVLV 180

Query: 181 KGLDKIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFEDDDDDVVQKV 240
           KGLDKIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFEDDDDDVVQKV
Sbjct: 181 KGLDKIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFEDDDDDVVQKV 240

Query: 241 TMWNQVQLPSDWPPRLHIPTVPRLVFGSSKEAQVSN 277
           TMWNQVQLPSDWPPRLHIPTVPRLVFGSSKEAQVSN
Sbjct: 241 TMWNQVQLPSDWPPRLHIPTVPRLVFGSSKEAQVSN 276

[Close]
BLAST of Csa1G614140 vs. NCBI nr
Match: gi|700211398|gb|KGN66494.1| (hypothetical protein Csa_1G614640 [Cucumis sativus])

HSP 1 Score: 198.4 bits (503), Expect = 1.7e-47
Identity = 110/242 (45.45%), Postives = 154/242 (63.64%), Query Frame = 1 

Query: 8   CSSKNFVG-DHSLEEEEYVEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSKNDPSIRT 67
           C S NF G  HSL+ EEY++KGK+L+KWK+P++P  KIY   + N F  F   +DP I+T
Sbjct: 5   CWSSNFGGGSHSLDSEEYIKKGKNLLKWKIPKIPTTKIY---KSNPFIFF---SDPFIKT 64

Query: 68  TEGQISFGNEGGSFKLYGQTP--SSYCRRRRISFFNTMNIGLVQIGVKTLTKKIPPNASI 127
            E  +   N    F+L    P   ++  +R   F+  +N+G++QIGVKTLT KIP NASI
Sbjct: 65  KEETMPCENGSQVFRLISGNPMVDNFQEKR---FYTRLNMGMIQIGVKTLTTKIPSNASI 124

Query: 128 ILCLRDNRIEKLEDSLLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVLVKGLD 187
           ILC+ D R +  EDS+L LVESKL DGP +FN+FPNI + +F   +     +  +V+G +
Sbjct: 125 ILCVFDTRNDNFEDSILGLVESKLIDGPIFFNIFPNITMPIFHPKLLESFVLIAMVQGFE 184

Query: 188 KIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFEDDDDDVVQKVTMWN 247
           ++P+G++PI +  RTCYKL  +   + ALIESP GKTVFFQ         D  QKV+ W+
Sbjct: 185 QLPQGTSPISLMWRTCYKLQASALPT-ALIESPQGKTVFFQTNFENSKVAD--QKVSQWD 234

[Close]
BLAST of Csa1G614140 vs. NCBI nr
Match: gi|147828010|emb|CAN68515.1| (hypothetical protein VITISV_001866 [Vitis vinifera])

HSP 1 Score: 120.9 bits (302), Expect = 3.4e-24
Identity = 73/242 (30.17%), Postives = 122/242 (50.41%), Query Frame = 1 

Query: 20  EEEEYVEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSKNDPSIRTTEGQISFGNEGGS 79
           EE  Y +    L  WK+P+V   +IY   +K  F  F    D +I+T+E  +S   +   
Sbjct: 16  EEINYPKIQNDLDDWKLPKVSNQEIY---KKGTFKFF---TDYTIKTSEMSVSLEQDDQV 75

Query: 80  FKLYGQTPSSYCRRRRISFFNTMNIGLVQIGVKTLTKKIPPNASIILCLRDNRIEKLEDS 139
            +L         +R     +N ++ G++Q+  K LT+ +  N SI++CLRDNR  +  DS
Sbjct: 76  IRLLDNRSIDKHKR---DGYNFIHFGMIQVAAKPLTR-LGLNTSIVMCLRDNRHLEYRDS 135

Query: 140 LLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVLVKGLDKIPKGSAPIVVTCRT 199
           ++  V++ L DGP YF  +PN  + +  + I + + +H+   G  KI  G++P+ +  R 
Sbjct: 136 IIGAVQAGLNDGPVYFQCYPNFTVRIRDADILDSVVLHIKTHGF-KIKPGNSPVSIITRF 195

Query: 200 CYKLNQNDFGSEALIESPVGKTVFFQIEIFEDDDDDVVQKVTMWNQVQLPSDWPPRLHIP 259
            YK      GS AL  SP G+T +F  ++  D  D ++ K  +W  V  P +W     +P
Sbjct: 196 AYKSMNTSVGSGALCTSPKGETTYFHSDML-DKSDFIIPKKILWKDVDFPENWHFANAVP 245

Query: 260 TV 262
            +
Sbjct: 256 AI 245

[Close]
BLAST of Csa1G614140 vs. NCBI nr
Match: gi|147777988|emb|CAN67571.1| (hypothetical protein VITISV_036869 [Vitis vinifera])

HSP 1 Score: 120.2 bits (300), Expect = 5.8e-24
Identity = 72/242 (29.75%), Postives = 122/242 (50.41%), Query Frame = 1 

Query: 20  EEEEYVEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSKNDPSIRTTEGQISFGNEGGS 79
           EE  Y +    L  WK+P+V   +IY   +K  F  F    D +I+T+E  +S   +   
Sbjct: 16  EEINYPKIQNDLDDWKLPKVSNQEIY---KKGTFKFF---TDYTIKTSEMTVSLEQDDQV 75

Query: 80  FKLYGQTPSSYCRRRRISFFNTMNIGLVQIGVKTLTKKIPPNASIILCLRDNRIEKLEDS 139
            +L          + +   +N ++ G++Q+  K LT+ +  N +I++CLRDNR  +  DS
Sbjct: 76  IRLLDNRS---VEKHKKDGYNFIHFGMIQVAAKPLTR-LGLNTAIVMCLRDNRHLEYRDS 135

Query: 140 LLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVLVKGLDKIPKGSAPIVVTCRT 199
           ++  V++ L DGP YF  +PN  + L  + I + + +H+   G  KI  G++P+ +  R 
Sbjct: 136 IIGAVQAGLNDGPVYFQCYPNFTVRLRDADILDSVVLHIKTHGF-KIKPGNSPVSIITRF 195

Query: 200 CYKLNQNDFGSEALIESPVGKTVFFQIEIFEDDDDDVVQKVTMWNQVQLPSDWPPRLHIP 259
            YK      GS AL  SP G+T +F  ++  D  D ++ K  +W  V  P +W     +P
Sbjct: 196 AYKSMNTSVGSGALCTSPKGETTYFHSDML-DKSDFIIPKKILWKDVDFPENWHFANAVP 245

Query: 260 TV 262
            +
Sbjct: 256 AI 245

[Close]
BLAST of Csa1G614140 vs. NCBI nr
Match: gi|147777988|emb|CAN67571.1| (hypothetical protein VITISV_036869 [Vitis vinifera])

HSP 1 Score: 112.5 bits (280), Expect = 1.2e-21
Identity = 70/250 (28.00%), Postives = 123/250 (49.20%), Query Frame = 1 

Query: 14   VGDHSLEEEEYVEKGKSLVKWKMPRVPIHKIYEER--RKNHFFIFPSKNDPSIRTTEGQI 73
            +G  +L  E  +   + L+  K   V  HK+  +   +K  F  F    D +I+T+E  +
Sbjct: 1543 LGARALPVEPLLAVDRRLLGCKRVGVTSHKVSNQEIYKKGTFKFF---TDYTIKTSEMTV 1602

Query: 74   SFGNEGGSFKLYGQTPSSYCRRRRISFFNTMNIGLVQIGVKTLTKKIPPNASIILCLRDN 133
            S   +    +L          + +   +N ++ G++Q+  K LT+ +  N +I++CLRDN
Sbjct: 1603 SLEQDDQVIRLLDNRS---VEKHKKDGYNFIHFGMIQVAAKPLTR-LGLNTAIVMCLRDN 1662

Query: 134  RIEKLEDSLLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVLVKGLDKIPKGSA 193
            R  +  DS++  V++ L DGP YF  +PN  + L  + I + + +H+   G  KI  G++
Sbjct: 1663 RHLEYRDSIIGAVQAGLNDGPVYFQCYPNFTVRLRDADILDSVVLHIKTHGF-KIKPGNS 1722

Query: 194  PIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFEDDDDDVVQKVTMWNQVQLPSD 253
            P+ +  R  YK      GS AL  SP G+T +F  ++  D  D ++ K  +W  V  P +
Sbjct: 1723 PVSIITRFAYKSMNTSVGSGALCTSPKGETTYFHSDML-DKSDFIIPKKILWKDVDFPEN 1782

Query: 254  WPPRLHIPTV 262
            W     +P +
Sbjct: 1783 WHFANAVPAI 1783


HSP 2 Score: 120.2 bits (300), Expect = 5.8e-24
Identity = 72/242 (29.75%), Postives = 122/242 (50.41%), Query Frame = 1 

Query: 20  EEEEYVEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSKNDPSIRTTEGQISFGNEGGS 79
           EE  Y +    L  WK+P+V   +IY   +K  F  F    D +I+T+E  +S   +   
Sbjct: 16  EEINYPKIQNDLDDWKLPKVSNQEIY---KKGTFKFF---TDYTIKTSEMTVSLEQDDQV 75

Query: 80  FKLYGQTPSSYCRRRRISFFNTMNIGLVQIGVKTLTKKIPPNASIILCLRDNRIEKLEDS 139
            +L          + +   +N ++ G++Q+  K LT+ +  N +I++CLRDNR  +  DS
Sbjct: 76  IRLLDNRS---VEKHKKDGYNFIHFGMIQVAAKPLTR-LGLNTAIVMCLRDNRHLEYRDS 135

Query: 140 LLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVLVKGLDKIPKGSAPIVVTCRT 199
           ++  V++ L DGP YF  +PN  + L  + I + + +H+   G  KI  G++P+ +  R 
Sbjct: 136 IIGAVQAGLNDGPVYFQCYPNFTVRLRDADILDSVVLHIKTHGF-KIKPGNSPVSIITRF 195

Query: 200 CYKLNQNDFGSEALIESPVGKTVFFQIEIFEDDDDDVVQKVTMWNQVQLPSDWPPRLHIP 259
            YK      GS AL  SP G+T +F  ++  D  D ++ K  +W  V  P +W     +P
Sbjct: 196 AYKSMNTSVGSGALCTSPKGETTYFHSDML-DKSDFIIPKKILWKDVDFPENWHFANAVP 245

Query: 260 TV 262
            +
Sbjct: 256 AI 245

The following BLAST results are available for this feature:
BLAST of Csa1G614140 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXM3_CUCSA5.3e-157100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G614140 PE=4 SV=1[more]
A0A0A0LZS0_CUCSA1.2e-4745.45Uncharacterized protein OS=Cucumis sativus GN=Csa_1G614640 PE=4 SV=1[more]
A5C0V2_VITVI2.4e-2430.17Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001866 PE=4 SV=1[more]
A5BNN5_VITVI4.1e-2429.75Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021290 PE=4 SV=1[more]
A5BNN5_VITVI4.1e-2429.75Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021290 PE=4 SV=1[more]
BLAST of Csa1G614140 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211397|gb|KGN66493.1|7.6e-157100.00hypothetical protein Csa_1G614140 [Cucumis sativus][more]
gi|700211398|gb|KGN66494.1|1.7e-4745.45hypothetical protein Csa_1G614640 [Cucumis sativus][more]
gi|147828010|emb|CAN68515.1|3.4e-2430.17hypothetical protein VITISV_001866 [Vitis vinifera][more]
gi|147777988|emb|CAN67571.1|5.8e-2429.75hypothetical protein VITISV_036869 [Vitis vinifera][more]
gi|147777988|emb|CAN67571.1|1.2e-2128.00hypothetical protein VITISV_036869 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU087476cucumber EST collection version 3.0transcribed_cluster
CU088809cucumber EST collection version 3.0transcribed_cluster
CU098657cucumber EST collection version 3.0transcribed_cluster
CU098727cucumber EST collection version 3.0transcribed_cluster
CU105441cucumber EST collection version 3.0transcribed_cluster
CU107946cucumber EST collection version 3.0transcribed_cluster
CU121594cucumber EST collection version 3.0transcribed_cluster
CU131259cucumber EST collection version 3.0transcribed_cluster
CU146602cucumber EST collection version 3.0transcribed_cluster
CU152069cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G614140.2Csa1G614140.2mRNA
Csa1G614140.1Csa1G614140.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU107946CU107946transcribed_cluster
CU152069CU152069transcribed_cluster
CU105441CU105441transcribed_cluster
CU121594CU121594transcribed_cluster
CU146602CU146602transcribed_cluster
CU098657CU098657transcribed_cluster
CU098727CU098727transcribed_cluster
CU088809CU088809transcribed_cluster
CU087476CU087476transcribed_cluster
CU131259CU131259transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33054FAMILY NOT NAMEDcoord: 67..217
score: 2.5
NoneNo IPR availablePANTHERPTHR33054:SF7SUBFAMILY NOT NAMEDcoord: 67..217
score: 2.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G614140MELO3C015185Melon (DHL92) v3.5.1cumeB041
Csa1G614140ClCG03G013160Watermelon (Charleston Gray)cuwcgB046
Csa1G614140Lsi06G005310Bottle gourd (USVL1VR-Ls)culsiB058
Csa1G614140MELO3C015185.2Melon (DHL92) v3.6.1cumedB033
Csa1G614140Cla97C03G063380Watermelon (97103) v2cuwmbB042
Csa1G614140Bhi02G001301Wax gourdcuwgoB096
Csa1G614140CSPI01G30430Wild cucumber (PI 183967)cpicuB001
Csa1G614140Cucsa.143440Cucumber (Gy14) v1cgycuB205
Csa1G614140CmaCh11G008510Cucurbita maxima (Rimu)cmacuB085
Csa1G614140CmoCh10G009680Cucurbita moschata (Rifu)cmocuB047
Csa1G614140Cp4.1LG18g01710Cucurbita pepo (Zucchini)cpecuB349
Csa1G614140CsGy1G029760Cucumber (Gy14) v2cgybcuB002
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G614140Watermelon (97103) v2cuwmbB030
Csa1G614140Wax gourdcuwgoB021
Csa1G614140Cucumber (Chinese Long) v2cucuB043
Csa1G614140Cucumber (Gy14) v1cgycuB165
Csa1G614140Cucurbita maxima (Rimu)cmacuB057
Csa1G614140Cucurbita maxima (Rimu)cmacuB537
Csa1G614140Cucurbita moschata (Rifu)cmocuB075
Csa1G614140Cucurbita moschata (Rifu)cmocuB528
Csa1G614140Cucurbita moschata (Rifu)cmocuB566
Csa1G614140Melon (DHL92) v3.5.1cumeB072
Csa1G614140Watermelon (Charleston Gray)cuwcgB034
Csa1G614140Watermelon (97103) v1cuwmB020
Csa1G614140Watermelon (97103) v1cuwmB071
Csa1G614140Cucurbita pepo (Zucchini)cpecuB652
Csa1G614140Cucurbita pepo (Zucchini)cpecuB703
Csa1G614140Bottle gourd (USVL1VR-Ls)culsiB003
Csa1G614140Cucumber (Gy14) v2cgybcuB243
Csa1G614140Melon (DHL92) v3.6.1cumedB067
Csa1G614140Silver-seed gourdcarcuB0192
Csa1G614140Silver-seed gourdcarcuB0499
Csa1G614140Silver-seed gourdcarcuB0551
Csa1G614140Silver-seed gourdcarcuB0932