Csa1G570230 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAACACAGAGGAGAGAAATGGAAAGACGACGAGGGTAAATTGGTTATTTCACATCTAAAAAAATGTCATCAATGACATTATTTTGAAAAATAGATCAATTTAATAGAAATATTTGGGTTTTAGTTACTTGGGTCAATTTTCCAAAATATCCCCATCCTTTCCGATTCTCGGCTCGCGTGAGTTCGACACTCTTCCCTCTCTCCGGTCACCTTCGGAGGAAAACAAGGAACTCTCTTTCAGGCCATCGCCGGTGTCCGTCGCAGCTGATCGTCGGTGCCCGTCACACCCCAGGTTTCGGTCCTGTTCTTGGCATCAGCGTGGGTGATTTTTCTTCCTCTGTTTTCGGGTTAGTTCATTTTTTGTTCTCTTGCCCCGATCTATTGATCACCCATAGTGTTTTGGCTTTAGAACGCCGGGTTCGTAGATTTTTCACTCCTGTCCTTCAAGGAGTTAGTGCTATGTGATTAGTATCACCAAAGATTGTGTAGCAGAGAGAATTTGAGCTAAACGATTTCACGTACGTTGTCTCCTGTAAGACAATTTCCCTCACAGTGTTTGATTTTCACGATTAATTGTCCCGCAAGATAGGTCAACAGTTAAATAGATGAAGTTTCATTTACTATCATATGAAAGACGTAAGTTTTAGTTTTAGAACAGATTCAATAAAGATTACAGATGCATGATGATTGAATTTTATCACACACATAAAATCTAGATGCACTAAAATTGTCTTAAGAGATTGTTATATGAATAATGTCAACAAAAATTAGAAAATATATGACCTTGTATACGGGAGAATTCCTTAATTTTGTTGATCTTGTATGAGTTTGTCCCAATCCTAGTGATGGGAGTTCTTACTGAGTATCTGGATGATTTTATTTTCCCTTCTCAATTAAATCTTGTTGTTGCTATGCTATCTTGTAAGCTGCTCATTCCCGTCTGTTGAAATGCCAGGTGGTTGTATCATAAAATTGGGAATGGGAGATTCTGAAGTTGGTGGTAAATTGACGAGGATGGTGTTTGTTACTGTGGGAACAACGAGTTTTGATGCTTTGGTTAGAGCAGTGGACACTGAGCAAGTGAAACAAATACTATATGCTAGAGGCTATACCCACCTTCTCATTCAAATGGGACGTGGTACATACAATCCAACCAAGGTAATGTCTGTCTGTCATTTGGTATGTTGTAGCATTGGATCCAAATGTAATCTTAGGTTTATTTATGATGTTCAAACCATATTTAACATCTTCATTTTCTTTTTGATGAAAGTTTAACTTTCATTTGGAAAAAAGTATTACAAAAGTCTCAATAACTAACTAAAAGGTAATGGGTTCAATCAATAGTGGCAATCTACCTAAGAATTATTTTCCTGCGAGTTTCCTTGACACCAACATGTTGTAGATTAGGTGGATTGTTCCGTGAGATTAGTCGAGATGCATGCGTGTAAGCTGGCCCGAACACTTACGGATATATAAAAAAAAAAAAATCATGCCCTAGTCTAAAATGAGCTTGAAACTACAAACTAGAGAATACTTGTAATTATGGAAGAATTATCATAGAGTTTGATTTCCGAAGGGAGACATCAAAATATAAAAAACTCTTAACCTATTCTGAAGCAATCTCTAGCTCTACACGCTTAATAATCATTTCTATTTGCTTTGATTCAAATATTCTACAATATAATATTAGAAAAGGGCCTAGTAGAGAAGGTTTCTCCAACTTGGAATGGTGTGTGCAAAAGGACCTTTTACAACATAGATTTATTGTCCACTGCCTTTTTGGAAGACTGCTCCAGCTCAATTTGAAATCCTCTACTTATTTTTTAACGAACAATGAAAACTCCTAGAAGTATCCATCCCAAAATTTCTGCATAAATTGCATCTTCACGAAATGTGGTTTGTATTTCTCCATTACATCTGACATGTATATGAGAATTGAGAACACACACCACTGCAGTAGCCGATTTAAAGGAAGTTGTATATAAATGAAAACATTATTTATTTATTTTTATTATAATATGAATATAATTCTATAATGAATAACTCAGCCTTCATTAACTATGTGTGTGCAGTCTCATGGAGAAGATGGGCTTGTTGTAGACTATTTCTCCTTCTCTTCAAGCATAGCTGATCATCTAAAATCAGCATCTCTTGTAATTAGCCATGCTGGTACAACTTCATTAGTTCCTGCTTTTATTCTTTGTTGTCTATAAATGTGATTCATAAGACCCTTTTGTCCCCAGGCTAACTGGCATCTCCCTCATGCAAATGCTATATATTTAAATTATGATTGGTTATTATTATGTATCGTAATTCTATCAGTTGGTACATGTGTTTCTATGACATGGATGCATTGAGATAGGTAATTTTTTCACGACCCAAATATATGCGCATTCAATTTGGCAGGGTATTTGAAAATGCAGTTTCATGTTGTATGTTTTTTTTTTATTATTATAAATATATAAAAATGAAACAACCCAAGGGATGAGAGGAGGCTTCCAATCTAACAATATCATGAGGCTATAATTACGAAAAGGAATTTTTTGTGGTTTGAACACAACTAAGGAGAAGTTGTTGTACATTGTTCCAAATATTTTGTTAGTAGCACTATTTTCTTACAAGATTCTCTTGTTCCTTTCCTTCCACAGTTCCACAGCAGCCACAAAAATTTGTTCAATCTCCTTTCCACACGGTTTATTCAAGGAAGGGCAAAAAGGAATTGTGGCTCTTTCTAGTGTTTTGGAGTGCTAATTCTAGTTAGTTTCTTTGGTGAAATGTTTTTGAACTGGGAATTATACCTCCTTCAGTCAGTCATGTTGATTTAGTTTATATCTTTTGTTTTTCACATGGAGATTTGGCAATCACTCTAGAAGATGTGATGAATAACTTGTATTTTGTGGGTTTGTAAACAGTTTACCCTCTCGGATAGGTCAGACTCTCTAGTTGTGTTGAATTTTCTTGTTGTAGCTCTAGAGTTGGTTCTCTGTCCTTGGAACCGTGAGTTCCTAATGGATGCTTGTCATGCACTGTGTCAATTTCTTGTTCTATTTCAGCATTGTGTCAGGCATAGTGTTGCACTTACTTGCCATATCTTTCAATTATTCGTCATTAACTTTTCTTCATTGATGGCCCTAAGTAGTGAAGTTGTGTACTTGACTCTGATAGGTTCAAATGATATTAGCATCCCTCATGCAACATGCTGATAAACATCGTTTTGGATGTTACATCTCTTGTTTGAGGTAAGCTACTACTGCATCCGATGAGCCTTCCATCCATTAATTTACGACAATGGATAACCTCCATGGAAAAAGGATTCAAGCAACAAGGCTTGGCAAGAGTAGAACGTGGTAATTGGTTTTCAAGCATGGAAACGTGTTGTGATGCCAATTGTCATGTTGTCAAAACTCACTATTTAATTTTTCCATCATGTTGTCTAAGAGGTGTTCTTCCTTGGTCAGTTTTCCAACACGAGTGTGCAGCCTCTATGCCACACGGACATTTTGCAAAACGCAAAGCAAGGCATGGTTCGAACAGGGCCAAGGCAGCACACATGTGGGAAATAAGATGTGGCCAAACACATACCTGCAGGTAGCACCCCAAAGCCATGAAGAATGCAGGACAAATGTGTAGGTGGTCTCACACAACAGAACATGTAAGCACACCATGCATGTAAAAATGTGCAGCGTAGAAAGGTGCACAAGTGTGCAAGTGGCACGTAGCGCCATGGGGGCAGCATAAGTAGTACATAAGCAATGTGCATATATGTGCACAGCAACGGGAGGGGACTGTGGGCCAAAGCTCAAGGCTTCTCCACGGTATTTAGAATCTGAATGTCCAAAGTGTGATAGAGGTAGATTTGGAACTCTAGTGGAGGAGGTACTCTGTAAGGGAAAGCAGGTAGTCTTACTCCCAAAGTTTACCCAAAAGCTAGGAGGGAAAATTGGGCAAAGTCTTAGCAAAGTCAAATTGAGTGAGAGGATCCTTTTGGAGGCTGTGTACCAACTGAGGGAGGAAAGTAATCAGTTTCAAATTAACTGCAACGGAGCAGGTAATGAAAATATTGCATCGTGATTCTGTCCTTTTTCTTCTTTGTTGGTATGAGTGGAACCAGTTTGGTGGGAGATAGCCAGCCAAGGGGCTCCGCTTTGTAGGTTATGGTGGGTGTTGAAGAAAGTGGCTAAGGAGAATTTTTTCTTACAGACTCTATAGCGGTGGGTGAGTGCTATTTTATTGACCCCTAGGGACAAGGTACTGTGCTAGACCTGGTAGAGAATGTACCACCACTGTCCACCTTCCAAAACCAAAAGTCTGCTCTGTTTGAGAAGTGAATTGATAAAACGTGGGGTAATCATAATACCCATTCTTGGATCTCTGTCATCTTTTTGGACGTTTCTTTGCATCCTTCAAATTTTCAGAGTCAGCTAAGACTGCATCATTAAGAACGCCTTTCCTGTTATCTTTGATAACCGGTGGCAAGGTTGGAGCCTCTTTTTCTTTTTCTTGACAATAAATGGGGTGAGGGAATTGAACCTCTAACCTTGAGGTTGATAGTACAGACACTATGCCAATTGAGTTGTGCAGTTGTGCTATGCTATTTTGACGTTTGAGCTACAAATTTTGATATTGAACAAACTCTTATACTCATAAATACATTTGCACAAAACATAATATTTCCTTGCAAATTAGAAGAAAAACTTTAAAATTTTAATCTCTTTAAATATGTTTACATCTATCTTAGACATAGCTTTTTGTTTGTTTGTTCGTTCTTTCTCGGCTGTGTCATTTGACAGTTGGTTCAACTTCATGCAGGGTCCGGAAGCATATTTGAGACATTGAGACTGGGTAAACCTTTGATTGTTGTAGTAAACGAAGATCTAATGGACAATCATCAAATCGAACTTGCAGAAGAACTGGCTGAGAGGAAGCATTTGTATTGTGCTCGACCCCAAACACTACATCAGACTATAGAGAGCTTGAATTTGGAGTCTATAATTCCATACACACCAGGTGATGCTAAACCGGTTGCCGCGCTCATTAATAGGTTTCTAGGCTTTCCTGAAGATTGATGAGGTTGTAAAGCTTCTTTCTCCAAATTAAAACACTTTAGTTCTTGAGATTATCAATGTTAATAGCTTTTCCAAATTAAAACCCCAAGGGAAACAAAATTTTGGCTTTTCCTCATTACGTTTTCAAACAATCTTCCTGTCAACCGAGTAATTCCTGAACATAAGTTGGCTTCCTGTACTTTTTCATGAACCAACAACATCTATCCGAAAGAAGCGACATCGATCAGTCTACAATTACCCATCTACATACTGGCCAGGTCATAGATATCTTCAGTCAGTTTTGACATTTTCCAGAAAGTGGTAGAGATGGCAACTTTTGGTATCAATTATAGTTTTGAGCATGTGACTGATGCTGATTGATCAGCAATTGAGAGATTTAAGATCAATGAGTCTTCGATGTGATGACAAATCCACATAAGCCAAAATTTGGATGGCAGTCATATTTGGAAGAGAAGAGCTTTTTACTTTATACTATCTGCATAATTTATATTATATTTTGAGGTTGGAAGTTCATTGAAATCAACTCAACTTCATTCTTTCAAGGCCAGCTAATCTCTTATGTACAACAAAATAACTAAGCAACAATATGTATGTATCTTGTGAGCTCCAGTTCATCATGTTGAATTGCAGAGAAGTGAGAGGGACTGTTAAAGGTAGTAGACAAAATTCTACACATGCTGATGATGATATTTGACAATGGAGAGTGGGGCCATCTAAGCTAAGGTAGCAATGTCAATTTCAAATGTTTTGTAGAATTAAAAGTTTGTTCATATTGATTTGTTGTTTTAAGAATTTGGTATTAAAGTGTTGTTTACTCAATGTTTTTGTGTGATTTAAAGCTTTTTTGTTGAAGTTGAGATTAAACTAAGTTTTAATGATCTTTTAGACATTGGA ATGAAACACAGAGGAGAGAAATGGAAAGACGACGAGGTTACTTGGGTCAATTTTCCAAAATATCCCCATCCTTTCCGATTCTCGGCTCGCGTGAGTTCGACACTCTTCCCTCTCTCCGGTCACCTTCGGAGGAAAACAAGGAACTCTCTTTCAGGCCATCGCCGGTGTCCGTCGCAGCTGATCGTCGGTGCCCGTCACACCCCAGGTTTCGGTCCTGTTCTTGGCATCAGCGTGGGTGATTTTTCTTCCTCTGTTTTCGGGTTAGTTCATTTTTTGTTCTCTTGCCCCGATCTATTGATCACCCATAGTGTTTTGGCTTTAGAACGCCGGGTTCGTAGATTTTTCACTCCTGTCCTTCAAGGAGTTAGTGGTTGTATCATAAAATTGGGAATGGGAGATTCTGAAGTTGGTGGTAAATTGACGAGGATGGTGTTTGTTACTGTGGGAACAACGAGTTTTGATGCTTTGGTTAGAGCAGTGGACACTGAGCAAGTGAAACAAATACTATATGCTAGAGGCTATACCCACCTTCTCATTCAAATGGGACGTGGTACATACAATCCAACCAAGTCTCATGGAGAAGATGGGCTTGTTGTAGACTATTTCTCCTTCTCTTCAAGCATAGCTGATCATCTAAAATCAGCATCTCTTGTAATTAGCCATGCTGGGTCCGGAAGCATATTTGAGACATTGAGACTGGGTAAACCTTTGATTGTTGTAGTAAACGAAGATCTAATGGACAATCATCAAATCGAACTTGCAGAAGAACTGGCTGAGAGGAAGCATTTGTATTGTGCTCGACCCCAAACACTACATCAGACTATAGAGAGCTTGAATTTGGAGTCTATAATTCCATACACACCAGGTGATGCTAAACCGGTTGCCGCGCTCATTAATAGGTTTCTAGGCTTTCCTGAAGATTGA ATGAAACACAGAGGAGAGAAATGGAAAGACGACGAGGTTACTTGGGTCAATTTTCCAAAATATCCCCATCCTTTCCGATTCTCGGCTCGCGTGAGTTCGACACTCTTCCCTCTCTCCGGTCACCTTCGGAGGAAAACAAGGAACTCTCTTTCAGGCCATCGCCGGTGTCCGTCGCAGCTGATCGTCGGTGCCCGTCACACCCCAGGTTTCGGTCCTGTTCTTGGCATCAGCGTGGGTGATTTTTCTTCCTCTGTTTTCGGGTTAGTTCATTTTTTGTTCTCTTGCCCCGATCTATTGATCACCCATAGTGTTTTGGCTTTAGAACGCCGGGTTCGTAGATTTTTCACTCCTGTCCTTCAAGGAGTTAGTGGTTGTATCATAAAATTGGGAATGGGAGATTCTGAAGTTGGTGGTAAATTGACGAGGATGGTGTTTGTTACTGTGGGAACAACGAGTTTTGATGCTTTGGTTAGAGCAGTGGACACTGAGCAAGTGAAACAAATACTATATGCTAGAGGCTATACCCACCTTCTCATTCAAATGGGACGTGGTACATACAATCCAACCAAGTCTCATGGAGAAGATGGGCTTGTTGTAGACTATTTCTCCTTCTCTTCAAGCATAGCTGATCATCTAAAATCAGCATCTCTTGTAATTAGCCATGCTGGGTCCGGAAGCATATTTGAGACATTGAGACTGGGTAAACCTTTGATTGTTGTAGTAAACGAAGATCTAATGGACAATCATCAAATCGAACTTGCAGAAGAACTGGCTGAGAGGAAGCATTTGTATTGTGCTCGACCCCAAACACTACATCAGACTATAGAGAGCTTGAATTTGGAGTCTATAATTCCATACACACCAGGTGATGCTAAACCGGTTGCCGCGCTCATTAATAGGTTTCTAGGCTTTCCTGAAGATTGA MKHRGEKWKDDEVTWVNFPKYPHPFRFSARVSSTLFPLSGHLRRKTRNSLSGHRRCPSQLIVGARHTPGFGPVLGISVGDFSSSVFGLVHFLFSCPDLLITHSVLALERRVRRFFTPVLQGVSGCIIKLGMGDSEVGGKLTRMVFVTVGTTSFDALVRAVDTEQVKQILYARGYTHLLIQMGRGTYNPTKSHGEDGLVVDYFSFSSSIADHLKSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQIELAEELAERKHLYCARPQTLHQTIESLNLESIIPYTPGDAKPVAALINRFLGFPED*
BLAST of Csa1G570230 vs. Swiss-Prot
Match: ALG13_RAT (UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Rattus norvegicus GN=Alg13 PE=1 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 6.1e-30 Identity = 69/162 (42.59%), Postives = 100/162 (61.73%), Query Frame = 1
BLAST of Csa1G570230 vs. Swiss-Prot
Match: ALG13_MOUSE (Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 OS=Mus musculus GN=Alg13 PE=1 SV=2) HSP 1 Score: 120.6 bits (301), Expect = 3.1e-26 Identity = 64/125 (51.20%), Postives = 81/125 (64.80%), Query Frame = 1
BLAST of Csa1G570230 vs. Swiss-Prot
Match: ALG13_HUMAN (Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 OS=Homo sapiens GN=ALG13 PE=1 SV=2) HSP 1 Score: 117.1 bits (292), Expect = 3.4e-25 Identity = 64/156 (41.03%), Postives = 93/156 (59.62%), Query Frame = 1
BLAST of Csa1G570230 vs. Swiss-Prot
Match: ALG13_SCHPO (UDP-N-acetylglucosamine transferase subunit alg13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=alg13 PE=3 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 3.2e-23 Identity = 60/146 (41.10%), Postives = 82/146 (56.16%), Query Frame = 1
BLAST of Csa1G570230 vs. Swiss-Prot
Match: ALG13_YARLI (UDP-N-acetylglucosamine transferase subunit ALG13 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ALG13 PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 9.7e-20 Identity = 54/125 (43.20%), Postives = 76/125 (60.80%), Query Frame = 1
BLAST of Csa1G570230 vs. TrEMBL
Match: A0A0A0LWH2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570230 PE=4 SV=1) HSP 1 Score: 619.8 bits (1597), Expect = 1.8e-174 Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 1
BLAST of Csa1G570230 vs. TrEMBL
Match: A0A061F2W9_THECC (Glycosyltransferase family protein 28 isoform 1 OS=Theobroma cacao GN=TCM_026593 PE=4 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 2.6e-72 Identity = 142/178 (79.78%), Postives = 159/178 (89.33%), Query Frame = 1
BLAST of Csa1G570230 vs. TrEMBL
Match: A0A067JHW6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23374 PE=4 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 3.8e-71 Identity = 142/180 (78.89%), Postives = 157/180 (87.22%), Query Frame = 1
BLAST of Csa1G570230 vs. TrEMBL
Match: C6T2Y7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 1.4e-70 Identity = 136/177 (76.84%), Postives = 152/177 (85.88%), Query Frame = 1
BLAST of Csa1G570230 vs. TrEMBL
Match: D7SSJ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0340g00070 PE=4 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 1.4e-70 Identity = 142/178 (79.78%), Postives = 156/178 (87.64%), Query Frame = 1
BLAST of Csa1G570230 vs. TAIR10
Match: AT4G16710.1 (AT4G16710.1 glycosyltransferase family protein 28) HSP 1 Score: 242.3 bits (617), Expect = 4.0e-64 Identity = 122/167 (73.05%), Postives = 139/167 (83.23%), Query Frame = 1
BLAST of Csa1G570230 vs. NCBI nr
Match: gi|700211002|gb|KGN66098.1| (hypothetical protein Csa_1G570230 [Cucumis sativus]) HSP 1 Score: 619.8 bits (1597), Expect = 2.6e-174 Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 1
BLAST of Csa1G570230 vs. NCBI nr
Match: gi|449435693|ref|XP_004135629.1| (PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Cucumis sativus]) HSP 1 Score: 351.7 bits (901), Expect = 1.3e-93 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1
BLAST of Csa1G570230 vs. NCBI nr
Match: gi|659099579|ref|XP_008450672.1| (PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Cucumis melo]) HSP 1 Score: 345.5 bits (885), Expect = 9.5e-92 Identity = 175/177 (98.87%), Postives = 175/177 (98.87%), Query Frame = 1
BLAST of Csa1G570230 vs. NCBI nr
Match: gi|590643808|ref|XP_007030904.1| (Glycosyltransferase family protein 28 isoform 1 [Theobroma cacao]) HSP 1 Score: 280.4 bits (716), Expect = 3.8e-72 Identity = 142/178 (79.78%), Postives = 159/178 (89.33%), Query Frame = 1
BLAST of Csa1G570230 vs. NCBI nr
Match: gi|720023644|ref|XP_010263394.1| (PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Nelumbo nucifera]) HSP 1 Score: 277.7 bits (709), Expect = 2.4e-71 Identity = 140/177 (79.10%), Postives = 156/177 (88.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|