Csa1G569530 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G569530
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionNuclear transcription factor Y subunit B-4; contains IPR003957 (Transcription factor, CBFA/NFYB, DNA topoisomerase), IPR009072 (Histone-fold)
LocationChr1 : 21023622 .. 21023978 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGAGAATTGGGAAAGTCTTCAACTACCAATAGCCAATGTTGAGAGAATAATGAAGAAGATAGTTCCAGAAAAGGGAAAGATTTCAAAAGAAGCCAAGAAGAGAATGCAAGAATGTGCGAATGAGTTCATTAACTTTGTCACAAGTGAAGCAGCACAAAGATGTCAGAATGAGAATAGAAGAACTCTCAATGGTGATGATATCTATTGGGCATTTGATTCTCTTGGCTTAGATAATTATGCTGAGGCTTCTTCCAAGTACCTGCTTAAGTTCAGAGAAGCTGAGAGAATCAAAGCTTCTGATAAAGCTATTATTACTTTCCAAGATCAACATGCAGGAGAAGAGGATCAATGA

mRNA sequence

ATGGGAGAGAATTGGGAAAGTCTTCAACTACCAATAGCCAATGTTGAGAGAATAATGAAGAAGATAGTTCCAGAAAAGGGAAAGATTTCAAAAGAAGCCAAGAAGAGAATGCAAGAATGTGCGAATGAGTTCATTAACTTTGTCACAAGTGAAGCAGCACAAAGATGTCAGAATGAGAATAGAAGAACTCTCAATGGTGATGATATCTATTGGGCATTTGATTCTCTTGGCTTAGATAATTATGCTGAGGCTTCTTCCAAGTACCTGCTTAAGTTCAGAGAAGCTGAGAGAATCAAAGCTTCTGATAAAGCTATTATTACTTTCCAAGATCAACATGCAGGAGAAGAGGATCAATGA

Coding sequence (CDS)

ATGGGAGAGAATTGGGAAAGTCTTCAACTACCAATAGCCAATGTTGAGAGAATAATGAAGAAGATAGTTCCAGAAAAGGGAAAGATTTCAAAAGAAGCCAAGAAGAGAATGCAAGAATGTGCGAATGAGTTCATTAACTTTGTCACAAGTGAAGCAGCACAAAGATGTCAGAATGAGAATAGAAGAACTCTCAATGGTGATGATATCTATTGGGCATTTGATTCTCTTGGCTTAGATAATTATGCTGAGGCTTCTTCCAAGTACCTGCTTAAGTTCAGAGAAGCTGAGAGAATCAAAGCTTCTGATAAAGCTATTATTACTTTCCAAGATCAACATGCAGGAGAAGAGGATCAATGA

Protein sequence

MGENWESLQLPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNENRRTLNGDDIYWAFDSLGLDNYAEASSKYLLKFREAERIKASDKAIITFQDQHAGEEDQ*
Homology
[Close]
BLAST of Csa1G569530 vs. Swiss-Prot
Match: NFYB4_ARATH (Nuclear transcription factor Y subunit B-4 OS=Arabidopsis thaliana GN=NFYB4 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.9e-28
Identity = 58/92 (63.04%), Postives = 73/92 (79.35%), Query Frame = 1 

Query: 6  ESLQLPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNENRRTLN 65
          E   LPIANV R+MK+I+P   KISKEAK+ +QECA EFI+FVT EA+++C  ENR+T+N
Sbjct: 4  EDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTVN 63

Query: 66 GDDIYWAFDSLGLDNYAEASSKYLLKFREAER 98
          GDDI+WA  +LGLDNYA+A  ++L K+REAER
Sbjct: 64 GDDIWWALSTLGLDNYADAVGRHLHKYREAER 95

[Close]
BLAST of Csa1G569530 vs. Swiss-Prot
Match: NFYB_MAIZE (Nuclear transcription factor Y subunit B OS=Zea mays GN=NFY2 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.9e-24
Identity = 53/101 (52.48%), Postives = 71/101 (70.30%), Query Frame = 1 

Query: 10  LPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNENRRTLNGDDI 69
           LPIAN+ RIMKK +P  GKI+K+AK+ +QEC +EFI+F+TSEA+ +CQ E R+T+NGDD+
Sbjct: 36  LPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDL 95

Query: 70  YWAFDSLGLDNYAEASSKYLLKFREAE-----RIKASDKAI 106
            WA  +LG ++Y E    YL K+RE E       K+SD +I
Sbjct: 96  LWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKSSDGSI 136

[Close]
BLAST of Csa1G569530 vs. Swiss-Prot
Match: NFYB3_ORYSJ (Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica GN=NFYB3 PE=1 SV=2)

HSP 1 Score: 112.8 bits (281), Expect = 2.5e-24
Identity = 49/87 (56.32%), Postives = 65/87 (74.71%), Query Frame = 1 

Query: 10  LPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNENRRTLNGDDI 69
           LPIAN+ RIMKK +P  GKI+K+AK+ +QEC +EFI+F+TSEA+ +CQ E R+T+NGDD+
Sbjct: 43  LPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDL 102

Query: 70  YWAFDSLGLDNYAEASSKYLLKFREAE 97
            WA  +LG ++Y E    YL K+RE E
Sbjct: 103 LWAMATLGFEDYIEPLKVYLQKYREME 129

[Close]
BLAST of Csa1G569530 vs. Swiss-Prot
Match: NFYB2_ARATH (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana GN=NFYB2 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.3e-24
Identity = 51/87 (58.62%), Postives = 63/87 (72.41%), Query Frame = 1 

Query: 10  LPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNENRRTLNGDDI 69
           LPIANV RIMKK +P   KISK+AK+ MQEC +EFI+FVT EA+ +CQ E R+T+NGDD+
Sbjct: 32  LPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKTINGDDL 91

Query: 70  YWAFDSLGLDNYAEASSKYLLKFREAE 97
            WA  +LG ++Y E    YL +FRE E
Sbjct: 92  LWAMTTLGFEDYVEPLKVYLQRFREIE 118

[Close]
BLAST of Csa1G569530 vs. Swiss-Prot
Match: NFYB7_ARATH (Nuclear transcription factor Y subunit B-7 OS=Arabidopsis thaliana GN=NFYB7 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.3e-24
Identity = 51/92 (55.43%), Postives = 66/92 (71.74%), Query Frame = 1 

Query: 10  LPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNENRRTLNGDDI 69
           LPIANV RIMKK++P  GKISK+AK+ +QEC +EFI+FVT EA+ +CQ E R+T+NGDDI
Sbjct: 41  LPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDI 100

Query: 70  YWAFDSLGLDNYAEASSKYLLKFREAERIKAS 102
            WA  +LG ++Y      YL K+R+ E  K +
Sbjct: 101 IWAITTLGFEDYVAPLKVYLCKYRDTEGEKVN 132

[Close]
BLAST of Csa1G569530 vs. TrEMBL
Match: A0A0A0LZ17_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569530 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 2.0e-60
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1 

Query: 1   MGENWESLQLPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNEN 60
           MGENWESLQLPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNEN
Sbjct: 1   MGENWESLQLPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNEN 60

Query: 61  RRTLNGDDIYWAFDSLGLDNYAEASSKYLLKFREAERIKASDKAIITFQDQHAGEEDQ 119
           RRTLNGDDIYWAFDSLGLDNYAEASSKYLLKFREAERIKASDKAIITFQDQHAGEEDQ
Sbjct: 61  RRTLNGDDIYWAFDSLGLDNYAEASSKYLLKFREAERIKASDKAIITFQDQHAGEEDQ 118

[Close]
BLAST of Csa1G569530 vs. TrEMBL
Match: A0A0A0LW12_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569510 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.1e-41
Identity = 85/98 (86.73%), Postives = 92/98 (93.88%), Query Frame = 1 

Query: 6   ESLQLPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNENRRTLN 65
           E L+LPIANVERIMKKI+P+KGKISKEAKK+MQECANEFI+FVTSEAAQRCQNENRRTLN
Sbjct: 9   EFLELPIANVERIMKKIIPQKGKISKEAKKKMQECANEFISFVTSEAAQRCQNENRRTLN 68

Query: 66  GDDIYWAFDSLGLDNYAEASSKYLLKFREAERIKASDK 104
           GDDIYWAF SLGLDNYAEASSK+LL FRE ERIK  +K
Sbjct: 69  GDDIYWAFGSLGLDNYAEASSKFLLNFREVERIKVDEK 106

[Close]
BLAST of Csa1G569530 vs. TrEMBL
Match: M5WPU4_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021948mg PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.5e-28
Identity = 62/95 (65.26%), Postives = 80/95 (84.21%), Query Frame = 1 

Query: 10  LPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNENRRTLNGDDI 69
           LPIANV RIMK+I+P++ KISKEAK+RMQECA EF++FVT+EA+ +C  ENR+T+NGDDI
Sbjct: 9   LPIANVGRIMKQILPQRAKISKEAKQRMQECATEFLSFVTAEASDKCHKENRKTVNGDDI 68

Query: 70  YWAFDSLGLDNYAEASSKYLLKFREAERIKASDKA 105
            WA  +LG DNYA+A+ +YL K+REAER KA+  A
Sbjct: 69  CWALSALGFDNYAQATIRYLHKYREAERDKAAANA 103

[Close]
BLAST of Csa1G569530 vs. TrEMBL
Match: M1CB00_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024745 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 5.8e-28
Identity = 62/109 (56.88%), Postives = 80/109 (73.39%), Query Frame = 1 

Query: 10  LPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNENRRTLNGDDI 69
           +PIANV RIMK+I+P   KISKEAK+ MQECA+EFI+FVT EA+ +CQ ENRRT+NGDDI
Sbjct: 9   VPIANVGRIMKQILPPTAKISKEAKETMQECASEFISFVTGEASDKCQKENRRTVNGDDI 68

Query: 70  YWAFDSLGLDNYAEASSKYLLKFREAERIKASDKAIITFQDQHAGEEDQ 119
            WA  SLG DNYAE   +YL K R+ ER++A+   +   +D     +D+
Sbjct: 69  CWALSSLGFDNYAEVMLRYLYKLRDFERVRANQNKLGLNEDDEDNRDDE 117

[Close]
BLAST of Csa1G569530 vs. TrEMBL
Match: A0A061F331_THECC (Nuclear transcription factor Y subunit B-4 OS=Theobroma cacao GN=TCM_026629 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 9.9e-28
Identity = 63/102 (61.76%), Postives = 77/102 (75.49%), Query Frame = 1 

Query: 10  LPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNENRRTLNGDDI 69
           LPIANV RIMK+I+P   K+SKEAK+ MQECA EF++FVT EA+ +C  ENR+T+NGDDI
Sbjct: 9   LPIANVGRIMKQILPPSAKLSKEAKQTMQECATEFVSFVTGEASDKCHKENRKTVNGDDI 68

Query: 70  YWAFDSLGLDNYAEASSKYLLKFREAERIKASDKAIITFQDQ 112
            WA   LG DNYAEA  +YL K+REAER KAS     + QD+
Sbjct: 69  CWALSVLGFDNYAEAIVRYLHKYREAEREKASQNKATSSQDK 110

[Close]
BLAST of Csa1G569530 vs. TAIR10
Match: AT1G09030.1 (AT1G09030.1 nuclear factor Y, subunit B4)

HSP 1 Score: 125.9 bits (315), Expect = 1.6e-29
Identity = 58/92 (63.04%), Postives = 73/92 (79.35%), Query Frame = 1 

Query: 6  ESLQLPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNENRRTLN 65
          E   LPIANV R+MK+I+P   KISKEAK+ +QECA EFI+FVT EA+++C  ENR+T+N
Sbjct: 4  EDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTVN 63

Query: 66 GDDIYWAFDSLGLDNYAEASSKYLLKFREAER 98
          GDDI+WA  +LGLDNYA+A  ++L K+REAER
Sbjct: 64 GDDIWWALSTLGLDNYADAVGRHLHKYREAER 95

[Close]
BLAST of Csa1G569530 vs. TAIR10
Match: AT5G47640.1 (AT5G47640.1 nuclear factor Y, subunit B2)

HSP 1 Score: 112.5 bits (280), Expect = 1.8e-25
Identity = 51/87 (58.62%), Postives = 63/87 (72.41%), Query Frame = 1 

Query: 10  LPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNENRRTLNGDDI 69
           LPIANV RIMKK +P   KISK+AK+ MQEC +EFI+FVT EA+ +CQ E R+T+NGDD+
Sbjct: 32  LPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKTINGDDL 91

Query: 70  YWAFDSLGLDNYAEASSKYLLKFREAE 97
            WA  +LG ++Y E    YL +FRE E
Sbjct: 92  LWAMTTLGFEDYVEPLKVYLQRFREIE 118

[Close]
BLAST of Csa1G569530 vs. TAIR10
Match: AT2G13570.1 (AT2G13570.1 nuclear factor Y, subunit B7)

HSP 1 Score: 112.1 bits (279), Expect = 2.4e-25
Identity = 51/92 (55.43%), Postives = 66/92 (71.74%), Query Frame = 1 

Query: 10  LPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNENRRTLNGDDI 69
           LPIANV RIMKK++P  GKISK+AK+ +QEC +EFI+FVT EA+ +CQ E R+T+NGDDI
Sbjct: 41  LPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDI 100

Query: 70  YWAFDSLGLDNYAEASSKYLLKFREAERIKAS 102
            WA  +LG ++Y      YL K+R+ E  K +
Sbjct: 101 IWAITTLGFEDYVAPLKVYLCKYRDTEGEKVN 132

[Close]
BLAST of Csa1G569530 vs. TAIR10
Match: AT4G14540.1 (AT4G14540.1 nuclear factor Y, subunit B3)

HSP 1 Score: 111.3 bits (277), Expect = 4.1e-25
Identity = 50/92 (54.35%), Postives = 65/92 (70.65%), Query Frame = 1 

Query: 10  LPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNENRRTLNGDDI 69
           LPIANV RIMKK +P   KISK+AK+ +QEC +EFI+F+T EA+ +CQ E R+T+NGDD+
Sbjct: 26  LPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDL 85

Query: 70  YWAFDSLGLDNYAEASSKYLLKFREAERIKAS 102
            WA  +LG ++Y E    YL K+RE E  K +
Sbjct: 86  LWAMTTLGFEDYVEPLKVYLQKYREVEGEKTT 117

[Close]
BLAST of Csa1G569530 vs. TAIR10
Match: AT3G53340.1 (AT3G53340.1 nuclear factor Y, subunit B10)

HSP 1 Score: 110.2 bits (274), Expect = 9.2e-25
Identity = 48/87 (55.17%), Postives = 66/87 (75.86%), Query Frame = 1 

Query: 10  LPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNENRRTLNGDDI 69
           LPIAN+ RIMK+ +P  GKI+K+AK+ MQEC +EFI+FVTSEA+ +CQ E R+T+NGDD+
Sbjct: 34  LPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKCQREKRKTINGDDL 93

Query: 70  YWAFDSLGLDNYAEASSKYLLKFREAE 97
            WA  +LG ++Y +    YL+++RE E
Sbjct: 94  LWAMATLGFEDYIDPLKVYLMRYREME 120

[Close]
BLAST of Csa1G569530 vs. NCBI nr
Match: gi|449435998|ref|XP_004135781.1| (PREDICTED: nuclear transcription factor Y subunit B-4-like [Cucumis sativus])

HSP 1 Score: 239.6 bits (610), Expect = 2.8e-60
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1 

Query: 1   MGENWESLQLPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNEN 60
           MGENWESLQLPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNEN
Sbjct: 1   MGENWESLQLPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNEN 60

Query: 61  RRTLNGDDIYWAFDSLGLDNYAEASSKYLLKFREAERIKASDKAIITFQDQHAGEEDQ 119
           RRTLNGDDIYWAFDSLGLDNYAEASSKYLLKFREAERIKASDKAIITFQDQHAGEEDQ
Sbjct: 61  RRTLNGDDIYWAFDSLGLDNYAEASSKYLLKFREAERIKASDKAIITFQDQHAGEEDQ 118

[Close]
BLAST of Csa1G569530 vs. NCBI nr
Match: gi|659100539|ref|XP_008451143.1| (PREDICTED: beta-galactosidase 15-like [Cucumis melo])

HSP 1 Score: 201.8 bits (512), Expect = 6.6e-49
Identity = 102/117 (87.18%), Postives = 106/117 (90.60%), Query Frame = 1 

Query: 1   MGENWESLQLPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNEN 60
           MGENWESLQLPIANVERIMKKI+P+KGKISKEAKK MQECANEFI+FVTSEAAQ+C NEN
Sbjct: 1   MGENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNEN 60

Query: 61  RRTLNGDDIYWAFDSLGLDNYAEASSKYLLKFREAERIKASDKAIITFQDQHAGEED 118
           RRTLNGDDIYWAF SLGLDNYAEASS  LLKFREAERIKASDKA ITFQ    G ED
Sbjct: 61  RRTLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKASDKA-ITFQHHQHGVED 116

[Close]
BLAST of Csa1G569530 vs. NCBI nr
Match: gi|449435996|ref|XP_004135780.1| (PREDICTED: nuclear transcription factor Y subunit B-4-like [Cucumis sativus])

HSP 1 Score: 176.4 bits (446), Expect = 3.0e-41
Identity = 85/98 (86.73%), Postives = 92/98 (93.88%), Query Frame = 1 

Query: 6   ESLQLPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNENRRTLN 65
           E L+LPIANVERIMKKI+P+KGKISKEAKK+MQECANEFI+FVTSEAAQRCQNENRRTLN
Sbjct: 9   EFLELPIANVERIMKKIIPQKGKISKEAKKKMQECANEFISFVTSEAAQRCQNENRRTLN 68

Query: 66  GDDIYWAFDSLGLDNYAEASSKYLLKFREAERIKASDK 104
           GDDIYWAF SLGLDNYAEASSK+LL FRE ERIK  +K
Sbjct: 69  GDDIYWAFGSLGLDNYAEASSKFLLNFREVERIKVDEK 106

[Close]
BLAST of Csa1G569530 vs. NCBI nr
Match: gi|659100537|ref|XP_008451142.1| (PREDICTED: nuclear transcription factor Y subunit B-4 [Cucumis melo])

HSP 1 Score: 156.8 bits (395), Expect = 2.4e-35
Identity = 77/97 (79.38%), Postives = 84/97 (86.60%), Query Frame = 1 

Query: 6   ESLQLPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNENRRTLN 65
           E L+LPIANVERIMKKI+P+KGKISKEAKK MQECANEFI+FVTSEAAQRC  ENRRTLN
Sbjct: 9   EFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHYENRRTLN 68

Query: 66  GDDIYWAFDSLGLDNYAEASSKYLLKFREAERIKASD 103
           GDDI WAF S GLDNYAE  +KYL K+RE ERIK  +
Sbjct: 69  GDDICWAFASSGLDNYAEVFAKYLHKYREVERIKVDE 105

[Close]
BLAST of Csa1G569530 vs. NCBI nr
Match: gi|645222118|ref|XP_008246442.1| (PREDICTED: nuclear transcription factor Y subunit B-4 [Prunus mume])

HSP 1 Score: 133.7 bits (335), Expect = 2.2e-28
Identity = 62/95 (65.26%), Postives = 80/95 (84.21%), Query Frame = 1 

Query: 10  LPIANVERIMKKIVPEKGKISKEAKKRMQECANEFINFVTSEAAQRCQNENRRTLNGDDI 69
           LPIANV RIMK+I+P++ KISKEAK+RMQECA EF++FVT+EA+ +C  ENR+T+NGDDI
Sbjct: 9   LPIANVGRIMKQILPQRAKISKEAKQRMQECATEFLSFVTAEASDKCHKENRKTVNGDDI 68

Query: 70  YWAFDSLGLDNYAEASSKYLLKFREAERIKASDKA 105
            WA  +LG DNYA+A+ +YL K+REAER KA+  A
Sbjct: 69  CWALSALGFDNYAQATIRYLHKYREAERDKAAANA 103

The following BLAST results are available for this feature:
BLAST of Csa1G569530 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NFYB4_ARATH2.9e-2863.04Nuclear transcription factor Y subunit B-4 OS=Arabidopsis thaliana GN=NFYB4 PE=1... [more]
NFYB_MAIZE1.9e-2452.48Nuclear transcription factor Y subunit B OS=Zea mays GN=NFY2 PE=2 SV=1[more]
NFYB3_ORYSJ2.5e-2456.32Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica GN=NF... [more]
NFYB2_ARATH3.3e-2458.62Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana GN=NFYB2 PE=2... [more]
NFYB7_ARATH4.3e-2455.43Nuclear transcription factor Y subunit B-7 OS=Arabidopsis thaliana GN=NFYB7 PE=2... [more]
BLAST of Csa1G569530 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LZ17_CUCSA2.0e-60100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569530 PE=4 SV=1[more]
A0A0A0LW12_CUCSA2.1e-4186.73Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569510 PE=4 SV=1[more]
M5WPU4_PRUPE1.5e-2865.26Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021948mg PE=4 S... [more]
M1CB00_SOLTU5.8e-2856.88Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024745 PE=4 SV=1[more]
A0A061F331_THECC9.9e-2861.76Nuclear transcription factor Y subunit B-4 OS=Theobroma cacao GN=TCM_026629 PE=4... [more]
BLAST of Csa1G569530 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G09030.11.6e-2963.04 nuclear factor Y, subunit B4[more]
AT5G47640.11.8e-2558.62 nuclear factor Y, subunit B2[more]
AT2G13570.12.4e-2555.43 nuclear factor Y, subunit B7[more]
AT4G14540.14.1e-2554.35 nuclear factor Y, subunit B3[more]
AT3G53340.19.2e-2555.17 nuclear factor Y, subunit B10[more]
BLAST of Csa1G569530 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449435998|ref|XP_004135781.1|2.8e-60100.00PREDICTED: nuclear transcription factor Y subunit B-4-like [Cucumis sativus][more]
gi|659100539|ref|XP_008451143.1|6.6e-4987.18PREDICTED: beta-galactosidase 15-like [Cucumis melo][more]
gi|449435996|ref|XP_004135780.1|3.0e-4186.73PREDICTED: nuclear transcription factor Y subunit B-4-like [Cucumis sativus][more]
gi|659100537|ref|XP_008451142.1|2.4e-3579.38PREDICTED: nuclear transcription factor Y subunit B-4 [Cucumis melo][more]
gi|645222118|ref|XP_008246442.1|2.2e-2865.26PREDICTED: nuclear transcription factor Y subunit B-4 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003958CBFA_NFYB_domain
IPR009072Histone-fold
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0043565 sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G569530.1Csa1G569530.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 9..72
score: 2.7
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 4..110
score: 3.6
IPR009072Histone-foldunknownSSF47113Histone-foldcoord: 7..115
score: 5.28
NoneNo IPR availablePRINTSPR00615CCAATSUBUNTAcoord: 37..55
score: 6.1E-13coord: 56..74
score: 6.1E-13coord: 75..93
score: 6.1
NoneNo IPR availablePANTHERPTHR11064CCAAT-BINDING TRANSCRIPTION FACTOR-RELATEDcoord: 10..118
score: 9.0
NoneNo IPR availablePANTHERPTHR11064:SF44NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-4coord: 10..118
score: 9.0

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G569530Melon (DHL92) v3.5.1cumeB041
Csa1G569530Watermelon (Charleston Gray)cuwcgB046
Csa1G569530Watermelon (97103) v1cuwmB020
Csa1G569530Cucurbita pepo (Zucchini)cpecuB353
Csa1G569530Cucurbita pepo (Zucchini)cpecuB656
Csa1G569530Bottle gourd (USVL1VR-Ls)culsiB058
Csa1G569530Cucumber (Gy14) v2cgybcuB002
Csa1G569530Melon (DHL92) v3.6.1cumedB033
Csa1G569530Silver-seed gourdcarcuB0273
Csa1G569530Watermelon (97103) v2cuwmbB042
Csa1G569530Wax gourdcuwgoB082
Csa1G569530Wax gourdcuwgoB107
Csa1G569530Cucumber (Gy14) v1cgycuB278
Csa1G569530Cucurbita maxima (Rimu)cmacuB059
Csa1G569530Cucurbita maxima (Rimu)cmacuB099
Csa1G569530Cucurbita maxima (Rimu)cmacuB159
Csa1G569530Cucurbita moschata (Rifu)cmocuB055
Csa1G569530Cucurbita moschata (Rifu)cmocuB087
Csa1G569530Cucurbita moschata (Rifu)cmocuB146