Csa1G569500 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGCTGTTCCACACCAAAGGCAGACTAGGAAGAACAATGGGTTGGCTTCAAATTCTATTAATAGGACTTGTTATCATCATGACCACATTGAGTCTCTTCAAGTTCTACTCAGCTGGATTTATCTTTCACAAGGACGACGTTTGCCGATACTTCTACACCACAACGAGGCACGCCTACGAAGAAACGTTCGATGCAAAAGCGTTATCCAACCGAGTCGAAGAAGTTCTAGATCAGCTAGAAAGTTTACAAGAGAAACTCGAATTCACAGTCGAAGAGATGGGGAAGAACAAGCAAGTGTTGAACAATGGGAAGATCACAATGATTGAGCATAAAAAGTACTTAGAAGATGAAGTGATTAAGCCTCTTTATAATGCTCATATTGCTTTAAGGCAAATAAGATTACCAAAAGTTGAAAAAAATGGTCAGAATTCTTCTGCTATGAAAGAAGAGCCTTTGATCAACAATTTTGTGGTTGAGGAAATAAGAAAATATATTTCTCCAAAGAAAAGTAGAATTGGGAAACTCAATATGTATATGACTGAGAATATATACAACACAATTGGACATGCTTGTGTTCTGTATAGGAAAGAATTGGAAGATTATATGGATTATGATATTGGTTCATATTGTAAAGATGATTGGAATTTAGCTCAGAAACTTATGCTCAACGGTTGCGATCCGTTGCCTCGTCGACGGTGCTTGACAAGAGCGTCGAAGGTCTACCAAAAGCCGTATCCATTGAACGAATCGCTATGGAAGATGCCGGACGATCGAAACGTAAGATGGAGTAACTATCAATGTAGGAACTTTTCTTGCTTGTCTAGCAACAATCCCAAAAAGGGATACAACAAATGTAGTGGTTGTTTTGAAATGGAGAAAGAGAAGCTCAAATGGGTCATTAGCAATAGCTCTCTCGCAGTCGATTTTGCGATATCGGATGTATTAGCGATCAAGCCGGGGGAGATTCGGATCGGGTTGGATTTTGGGATCAGCACAGGGAGTTTTGCAGCAAGAATGAGAGAAGAAAATGTGACAATTGTGACAACAGCTTTGAACCTTGGAGCTCCTTTCAATGAATTTATTGCTTTAAGAGGTTTGTTTCCACTGTATTTGACATTAAACCAAAGACTTCCTCTGTTTGATAACACAATGGATTTGATTCACACAACTGGTTTCATGGATGGTTGGCTAGATATGTTGTTGTTGGATTTCATACTTTTCGATTGGGATCGTGTTCTACGACCGGGAGGATTGTTATGGATTGACAGATTCTTTTGCGATCGAAAGGATCTCGACGATTACATGTACATGTTTCTGCAGTTTAGATACAAGAAACATAAATGGAGTATTGCTCCTAAATCAAAAAATGAAGTCTACCTTTCTGCATTGTTGGAAAAACCTCCAAGAGCAATATGATAATTATATGTATGTATTCACAATAATTTGTTTTGGTTTTGATCACTTTCATTCAGTCTAA ATGAAGAAGCTGTTCCACACCAAAGGCAGACTAGGAAGAACAATGGGTTGGCTTCAAATTCTATTAATAGGACTTGTTATCATCATGACCACATTGAGTCTCTTCAAGTTCTACTCAGCTGGATTTATCTTTCACAAGGACGACGTTTGCCGATACTTCTACACCACAACGAGGCACGCCTACGAAGAAACGTTCGATGCAAAAGCGTTATCCAACCGAGTCGAAGAAGTTCTAGATCAGCTAGAAAGTTTACAAGAGAAACTCGAATTCACAGTCGAAGAGATGGGGAAGAACAAGCAAGTGTTGAACAATGGGAAGATCACAATGATTGAGCATAAAAAGTACTTAGAAGATGAAGTGATTAAGCCTCTTTATAATGCTCATATTGCTTTAAGGCAAATAAGATTACCAAAAGTTGAAAAAAATGGTCAGAATTCTTCTGCTATGAAAGAAGAGCCTTTGATCAACAATTTTGTGGTTGAGGAAATAAGAAAATATATTTCTCCAAAGAAAAGTAGAATTGGGAAACTCAATATGAAAGAATTGGAAGATTATATGGATTATGATATTGGTTCATATTTCTAA ATGAAGAAGCTGTTCCACACCAAAGGCAGACTAGGAAGAACAATGGGTTGGCTTCAAATTCTATTAATAGGACTTGTTATCATCATGACCACATTGAGTCTCTTCAAGTTCTACTCAGCTGGATTTATCTTTCACAAGGACGACGTTTGCCGATACTTCTACACCACAACGAGGCACGCCTACGAAGAAACGTTCGATGCAAAAGCGTTATCCAACCGAGTCGAAGAAGTTCTAGATCAGCTAGAAAGTTTACAAGAGAAACTCGAATTCACAGTCGAAGAGATGGGGAAGAACAAGCAAGTGTTGAACAATGGGAAGATCACAATGATTGAGCATAAAAAGTACTTAGAAGATGAAGTGATTAAGCCTCTTTATAATGCTCATATTGCTTTAAGGCAAATAAGATTACCAAAAGTTGAAAAAAATGGTCAGAATTCTTCTGCTATGAAAGAAGAGCCTTTGATCAACAATTTTGTGGTTGAGGAAATAAGAAAATATATTTCTCCAAAGAAAAGTAGAATTGGGAAACTCAATATGAAAGAATTGGAAGATTATATGGATTATGATATTGGTTCATATTTCTAA MKKLFHTKGRLGRTMGWLQILLIGLVIIMTTLSLFKFYSAGFIFHKDDVCRYFYTTTRHAYEETFDAKALSNRVEEVLDQLESLQEKLEFTVEEMGKNKQVLNNGKITMIEHKKYLEDEVIKPLYNAHIALRQIRLPKVEKNGQNSSAMKEEPLINNFVVEEIRKYISPKKSRIGKLNMKELEDYMDYDIGSYF*
BLAST of Csa1G569500 vs. TrEMBL
Match: A0A0A0LYH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569500 PE=4 SV=1) HSP 1 Score: 389.4 bits (999), Expect = 2.5e-105 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1
BLAST of Csa1G569500 vs. TrEMBL
Match: M5VZ11_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005305mg PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 1.7e-56 Identity = 126/211 (59.72%), Postives = 151/211 (71.56%), Query Frame = 1
BLAST of Csa1G569500 vs. TrEMBL
Match: W9QRU8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013532 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 3.1e-55 Identity = 120/217 (55.30%), Postives = 150/217 (69.12%), Query Frame = 1
BLAST of Csa1G569500 vs. TrEMBL
Match: B9I7Q1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s02010g PE=4 SV=2) HSP 1 Score: 218.8 bits (556), Expect = 5.9e-54 Identity = 119/211 (56.40%), Postives = 150/211 (71.09%), Query Frame = 1
BLAST of Csa1G569500 vs. TrEMBL
Match: A0A068V3W9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00015346001 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 8.5e-53 Identity = 111/211 (52.61%), Postives = 154/211 (72.99%), Query Frame = 1
BLAST of Csa1G569500 vs. TAIR10
Match: AT3G05390.1 (AT3G05390.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 171.0 bits (432), Expect = 7.2e-43 Identity = 98/203 (48.28%), Postives = 130/203 (64.04%), Query Frame = 1
BLAST of Csa1G569500 vs. NCBI nr
Match: gi|700210978|gb|KGN66074.1| (hypothetical protein Csa_1G569500 [Cucumis sativus]) HSP 1 Score: 389.4 bits (999), Expect = 3.6e-105 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1
BLAST of Csa1G569500 vs. NCBI nr
Match: gi|778662477|ref|XP_011659893.1| (PREDICTED: uncharacterized protein LOC101207467 [Cucumis sativus]) HSP 1 Score: 375.9 bits (964), Expect = 4.2e-101 Identity = 193/211 (91.47%), Postives = 193/211 (91.47%), Query Frame = 1
BLAST of Csa1G569500 vs. NCBI nr
Match: gi|659099523|ref|XP_008450643.1| (PREDICTED: uncharacterized protein LOC103492170 [Cucumis melo]) HSP 1 Score: 354.4 bits (908), Expect = 1.3e-94 Identity = 184/211 (87.20%), Postives = 185/211 (87.68%), Query Frame = 1
BLAST of Csa1G569500 vs. NCBI nr
Match: gi|694403402|ref|XP_009376648.1| (PREDICTED: uncharacterized protein LOC103965332 [Pyrus x bretschneideri]) HSP 1 Score: 227.6 bits (579), Expect = 1.8e-56 Identity = 128/212 (60.38%), Postives = 154/212 (72.64%), Query Frame = 1
BLAST of Csa1G569500 vs. NCBI nr
Match: gi|595823908|ref|XP_007205147.1| (hypothetical protein PRUPE_ppa005305mg [Prunus persica]) HSP 1 Score: 227.3 bits (578), Expect = 2.4e-56 Identity = 126/211 (59.72%), Postives = 151/211 (71.56%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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