BLAST of Csa1G524740 vs. Swiss-Prot
Match:
PP265_ARATH (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1)
HSP 1 Score: 965.3 bits (2494), Expect = 3.3e-280
Identity = 472/645 (73.18%), Postives = 550/645 (85.27%), Query Frame = 1
Query: 6 TPYSTHYPPSSPRYSTS-KLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALYLLSHE 65
T ++ ++ P SP S +++++ S + +NN LIQSLCK+G LKQA+ +LS E
Sbjct: 13 TYHTVNFLPRSPLKPPSCSVALNNPSISSGAGAKISNNQLIQSLCKEGKLKQAIRVLSQE 72
Query: 66 SNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNAR 125
S+P+QQT ELLIL R+SLSDAL VH+ ++D G DQDPFLATKLI M+S+L +VD AR
Sbjct: 73 SSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYAR 132
Query: 126 KVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASE 185
KVFDKTRKRTIYVWNALFRAL LAG G +VL LY +MN +GV SDRFTYTY+LKACVASE
Sbjct: 133 KVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASE 192
Query: 186 CLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWS 245
C V+ L KGKEIHAH+ R GY +HV++MTTL+DMYARFGCV YAS VF MPV+NVVSWS
Sbjct: 193 CTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWS 252
Query: 246 AMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYIL 305
AMIACYAKNGK +EAL FREMM T DS PNSVTMVSVLQACA+ AALEQGKLIH YIL
Sbjct: 253 AMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYIL 312
Query: 306 RRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIK 365
RRGLDSILPVISAL+TMY RCGKLE GQ +FDRMH +DVV WNSLISSYG+HGYG+KAI+
Sbjct: 313 RRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQ 372
Query: 366 IFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLL 425
IFEEM+ +G SP+ ++F+SVLGACSH GLVEEGK+LFE+M ++HGI+P +EHYACMVDLL
Sbjct: 373 IFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLL 432
Query: 426 GRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYV 485
GRANRLDEAAK+++D+R EPGPKVWGSLLG+CRIH +VELAERAS+RLF LEP NAGNYV
Sbjct: 433 GRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYV 492
Query: 486 LLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHA 545
LLADIYAEA+MWDEVKRVKKLL+ R LQK+PGR W+EVRRK+YSF SVDEFNP EQ+HA
Sbjct: 493 LLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHA 552
Query: 546 LLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITK 605
LV L+ +MK++GY PQTK VLY+L+ EEKERIVLGHSEKLA+AFGLINTSKG+ IRITK
Sbjct: 553 FLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITK 612
Query: 606 NLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
NLRLCEDCH TKFISKF ++EI+VRD+NRFH FK+GVCSCGDYW
Sbjct: 613 NLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
BLAST of Csa1G524740 vs. Swiss-Prot
Match:
PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1)
HSP 1 Score: 472.6 bits (1215), Expect = 6.8e-132
Identity = 235/559 (42.04%), Postives = 348/559 (62.25%), Query Frame = 1
Query: 91 VHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGR 150
VH + V F ++ L++M+S+ +D+A+ VF + R++ + ++ A G
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 151 GNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVH 210
+ ++L+ M G+S D +T T +L C L +GK +H I + G +
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYR----LLDEGKRVHEWIKENDLGFDIF 437
Query: 211 VMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNT 270
V LMDMYA+ G + A VF EM VK+++SW+ +I Y+KN EAL LF ++L
Sbjct: 438 VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN-LLLEE 497
Query: 271 HDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLES 330
P+ T+ VL ACA+ +A ++G+ IH YI+R G S V ++L+ MYA+CG L
Sbjct: 498 KRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLL 557
Query: 331 GQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSH 390
++FD + KD+V W +I+ YG+HG+G++AI +F +M G ISF+S+L ACSH
Sbjct: 558 AHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSH 617
Query: 391 TGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWG 450
+GLV+EG + F M E I+P+VEHYAC+VD+L R L +A + IE++ I P +WG
Sbjct: 618 SGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWG 677
Query: 451 SLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRE 510
+LL CRIH V+LAE+ ++++F+LEP N G YVL+A+IYAEAE W++VKR++K + R
Sbjct: 678 ALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRG 737
Query: 511 LQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLD 570
L+K PG SWIE++ ++ F + D NP+ E + A L + M + GY+P TK L D +
Sbjct: 738 LRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAE 797
Query: 571 QEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVR 630
+ EKE + GHSEKLA+A G+I++ G IR+TKNLR+C DCH + KF+SK REI++R
Sbjct: 798 EMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLR 857
Query: 631 DLNRFHHFKDGVCSCGDYW 650
D NRFH FKDG CSC +W
Sbjct: 858 DSNRFHQFKDGHCSCRGFW 871
HSP 2 Score: 184.9 bits (468), Expect = 2.8e-45
Identity = 116/427 (27.17%), Postives = 214/427 (50.12%), Query Frame = 1
Query: 42 NHLIQSLCKQGNLKQALYLLSHESN---PTQQTCELLILSAARRNSLSDALDVHQLLVDG 101
N ++ C+ GNL+ A+ LL + C +L L A + SL D +V +
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSK-SLKDGKEVDNFIRGN 124
Query: 102 GFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELY 161
GF D L +KL M++ + A +VFD+ + WN L LA +G + + L+
Sbjct: 125 GFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 184
Query: 162 PRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDM 221
+M GV D +T++ + K+ + + + G+++H IL+ G+G V +L+
Sbjct: 185 KKMMSSGVEMDSYTFSCVSKSFSS----LRSVHGGEQLHGFILKSGFGERNSVGNSLVAF 244
Query: 222 YARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSV 281
Y + V A VFDEM ++V+SW+++I Y NG + L +F +M+++ + +
Sbjct: 245 YLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI--DLA 304
Query: 282 TMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRM 341
T+VSV CA + G+ +H+ ++ + L+ MY++CG L+S + +F M
Sbjct: 305 TIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM 364
Query: 342 HKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGK 401
+ VV + S+I+ Y G +A+K+FEEM + G SP + +VL C+ L++EGK
Sbjct: 365 SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGK 424
Query: 402 KLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRI 461
++ E +KE+ + + ++D+ + + EA + ++R++ W +++G
Sbjct: 425 RVHE-WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS-WNTIIGGYSK 482
Query: 462 HCHVELA 466
+C+ A
Sbjct: 485 NCYANEA 482
HSP 3 Score: 174.9 bits (442), Expect = 2.9e-42
Identity = 110/404 (27.23%), Postives = 197/404 (48.76%), Query Frame = 1
Query: 42 NHLIQSLCKQGNLKQALYL----LSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVD 101
N L+ L K G+ ++ L +S T + S + S+ +H ++
Sbjct: 164 NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILK 223
Query: 102 GGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLEL 161
GF + + L+ + + VD+ARKVFD+ +R + WN++ G L +
Sbjct: 224 SGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSV 283
Query: 162 YPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMD 221
+ +M + G+ D T + C S L+S G+ +H+ ++ + TL+D
Sbjct: 284 FVQMLVSGIEIDLATIVSVFAGCADSR-LISL---GRAVHSIGVKACFSREDRFCNTLLD 343
Query: 222 MYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNS 281
MY++ G + A AVF EM ++VVS+++MIA YA+ G EA++LF EM P+
Sbjct: 344 MYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM--EEEGISPDV 403
Query: 282 VTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDR 341
T+ +VL CA + L++GK +H +I L + V +AL+ MYA+CG ++ +L+F
Sbjct: 404 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSE 463
Query: 342 MHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDH-GFSPSHISFISVLGACSHTGLVEE 401
M KD++ WN++I Y + Y +A+ +F +++ FSP + VL AC+ ++
Sbjct: 464 MRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDK 523
Query: 402 GKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDL 441
G+++ + +G +VD+ + L A + +D+
Sbjct: 524 GREI-HGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 560
BLAST of Csa1G524740 vs. Swiss-Prot
Match:
PP348_ARATH (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2)
HSP 1 Score: 467.6 bits (1202), Expect = 2.2e-130
Identity = 236/609 (38.75%), Postives = 375/609 (61.58%), Query Frame = 1
Query: 42 NHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFD 101
N +I C+ GN K+AL L + T L+ + + + +H + G +
Sbjct: 220 NAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLE 279
Query: 102 QDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRM 161
+ F++ KLI++++E + + +KVFD+ R + WN++ +A L + + L+ M
Sbjct: 280 SELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM 339
Query: 162 NMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAH-VHVMTTLMDMYA 221
+ + D T L A + S+ + ++ + + LR G+ + + ++ MYA
Sbjct: 340 RLSRIQPDCLTLISL--ASILSQ--LGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYA 399
Query: 222 RFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTM 281
+ G V A AVF+ +P +V+SW+ +I+ YA+NG EA+E++ +M + N T
Sbjct: 400 KLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYN-IMEEEGEIAANQGTW 459
Query: 282 VSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHK 341
VSVL AC+ AL QG +H +L+ GL + V+++L MY +CG+LE +F ++ +
Sbjct: 460 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 519
Query: 342 KDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKL 401
+ V WN+LI+ +G HG+G KA+ +F+EM+D G P HI+F+++L ACSH+GLV+EG+
Sbjct: 520 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWC 579
Query: 402 FESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHC 461
FE M ++GI PS++HY CMVD+ GRA +L+ A K I+ + ++P +WG+LL ACR+H
Sbjct: 580 FEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 639
Query: 462 HVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWI 521
+V+L + AS+ LF++EP + G +VLL+++YA A W+ V ++ + + L+K PG S +
Sbjct: 640 NVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSM 699
Query: 522 EVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLG 581
EV K+ F + ++ +P E+++ L L ++K GY P + VL D++ +EKE I++
Sbjct: 700 EVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMS 759
Query: 582 HSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKD 641
HSE+LA+AF LI T TIRI KNLR+C DCHSVTKFISK +REI+VRD NRFHHFK+
Sbjct: 760 HSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKN 819
Query: 642 GVCSCGDYW 650
GVCSCGDYW
Sbjct: 820 GVCSCGDYW 823
HSP 2 Score: 188.0 bits (476), Expect = 3.4e-46
Identity = 125/440 (28.41%), Postives = 224/440 (50.91%), Query Frame = 1
Query: 42 NHLIQSLCKQGNLKQ-----ALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLV 101
N +I + GN + +L++LS P +T +L A R ++ D +H L +
Sbjct: 121 NLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPS-VLKACR--TVIDGNKIHCLAL 180
Query: 102 DGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLE 161
GF D ++A LI+++S V NAR +FD+ R + WNA+ +G + L
Sbjct: 181 KFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT 240
Query: 162 LYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLM 221
L + M D T LL AC + +G IH++ ++HG + + V L+
Sbjct: 241 LSNGLRAM----DSVTVVSLLSACTEA----GDFNRGVTIHSYSIKHGLESELFVSNKLI 300
Query: 222 DMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPN 281
D+YA FG + VFD M V++++SW+++I Y N +P A+ LF+EM L+ P+
Sbjct: 301 DLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQ--PD 360
Query: 282 SVTMVSVLQACAAFAALEQGKLIHAYILRRG--LDSILPVISALITMYARCGKLESGQLI 341
+T++S+ + + + + + LR+G L+ I + +A++ MYA+ G ++S + +
Sbjct: 361 CLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDI-TIGNAVVVMYAKLGLVDSARAV 420
Query: 342 FDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHG-FSPSHISFISVLGACSHTGL 401
F+ + DV+ WN++IS Y +G+ +AI+++ M + G + + +++SVL ACS G
Sbjct: 421 FNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 480
Query: 402 VEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDL-RIEPGPKVWGSL 461
+ +G KL ++K +G+ V + D+ G+ RL++A + + R+ P W +L
Sbjct: 481 LRQGMKLHGRLLK-NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP--WNTL 540
Query: 462 LGACRIHCHVELAERASKRL 473
+ H H E A K +
Sbjct: 541 IACHGFHGHGEKAVMLFKEM 543
HSP 3 Score: 173.3 bits (438), Expect = 8.5e-42
Identity = 104/310 (33.55%), Postives = 165/310 (53.23%), Query Frame = 1
Query: 84 SLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFR 143
+L A +H LV Q+ ++ KL+N++ L V AR FD + R +Y WN +
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 144 ALALAGRGNDVLELYPR-MNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILR 203
AG ++V+ + M G++ D T+ +LKAC + G +IH L+
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRT-------VIDGNKIHCLALK 185
Query: 204 HGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALEL 263
G+ V+V +L+ +Y+R+ V A +FDEMPV+++ SW+AMI+ Y ++G EAL L
Sbjct: 186 FGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL 245
Query: 264 FREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMY 323
+ +SVT+VS+L AC +G IH+Y ++ GL+S L V + LI +Y
Sbjct: 246 SNGLR------AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 305
Query: 324 ARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFI 383
A G+L Q +FDRM+ +D++ WNS+I +Y L+ +AI +F+EM P ++ I
Sbjct: 306 AEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLI 362
Query: 384 SVLGACSHTG 393
S+ S G
Sbjct: 366 SLASILSQLG 362
HSP 4 Score: 98.2 bits (243), Expect = 3.5e-19
Identity = 68/270 (25.19%), Postives = 130/270 (48.15%), Query Frame = 1
Query: 190 LQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIAC 249
LQ K +HA ++ +V + L+++Y G V+ A FD + ++V +W+ MI+
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 250 YAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLD 309
Y + G E + F ML++ P+ T SVL+AC + G IH L+ G
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSS-GLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFM 186
Query: 310 SILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEM 369
+ V ++LI +Y+R + + +++FD M +D+ WN++IS Y G ++A+ + +
Sbjct: 187 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 246
Query: 370 IDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANR 429
+ ++ +S+L AC+ G G + +K HG++ + ++DL R
Sbjct: 247 ----RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYAEFGR 306
Query: 430 LDEAAKIIEDLRIEPGPKVWGSLLGACRIH 460
L + K+ + + + W S++ A ++
Sbjct: 307 LRDCQKVFDRMYVRDLIS-WNSIIKAYELN 326
BLAST of Csa1G524740 vs. Swiss-Prot
Match:
PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)
HSP 1 Score: 464.5 bits (1194), Expect = 1.9e-129
Identity = 243/623 (39.00%), Postives = 377/623 (60.51%), Query Frame = 1
Query: 29 FSFNPSTPPNSNNNHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDA 88
F +N S NNH +L N++ A +P T L+ + + + L
Sbjct: 85 FPWNAIIRGYSRNNHFQDALLMYSNMQLA------RVSPDSFTFPHLLKACSGLSHLQMG 144
Query: 89 LDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFD--KTRKRTIYVWNALFRALA 148
VH + GFD D F+ LI ++++ + +AR VF+ +RTI W A+ A A
Sbjct: 145 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 204
Query: 149 LAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYG 208
G + LE++ +M M V D + L+ A CL L++G+ IHA +++ G
Sbjct: 205 QNGEPMEALEIFSQMRKMDVKPD---WVALVSVLNAFTCLQD-LKQGRSIHASVVKMGLE 264
Query: 209 AHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREM 268
++ +L MYA+ G V+ A +FD+M N++ W+AMI+ YAKNG EA+++F EM
Sbjct: 265 IEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM 324
Query: 269 MLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCG 328
+ D P+++++ S + ACA +LEQ + ++ Y+ R + + SALI M+A+CG
Sbjct: 325 I--NKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCG 384
Query: 329 KLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLG 388
+E +L+FDR +DVV+W+++I YGLHG R+AI ++ M G P+ ++F+ +L
Sbjct: 385 SVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLM 444
Query: 389 ACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGP 448
AC+H+G+V EG F M +H I P +HYAC++DLLGRA LD+A ++I+ + ++PG
Sbjct: 445 ACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGV 504
Query: 449 KVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLL 508
VWG+LL AC+ H HVEL E A+++LF ++P+N G+YV L+++YA A +WD V V+ +
Sbjct: 505 TVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRM 564
Query: 509 DSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVL 568
+ L K G SW+EVR ++ +F D+ +P+ E++ + + + +K+ G+ L
Sbjct: 565 KEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASL 624
Query: 569 YDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADRE 628
+DL+ EE E + HSE++A+A+GLI+T +G +RITKNLR C +CH+ TK ISK DRE
Sbjct: 625 HDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDRE 684
Query: 629 IMVRDLNRFHHFKDGVCSCGDYW 650
I+VRD NRFHHFKDGVCSCGDYW
Sbjct: 685 IVVRDTNRFHHFKDGVCSCGDYW 694
HSP 2 Score: 230.7 bits (587), Expect = 4.5e-59
Identity = 131/387 (33.85%), Postives = 216/387 (55.81%), Query Frame = 1
Query: 75 LILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRT 134
LI SA + L +H L+ G FL TKLI+ S + AR+VFD +
Sbjct: 27 LIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQ 86
Query: 135 IYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGK 194
I+ WNA+ R + D L +Y M + VS D FT+ +LLKAC +S LQ G+
Sbjct: 87 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG----LSHLQMGR 146
Query: 195 EIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPV--KNVVSWSAMIACYAK 254
+HA + R G+ A V V L+ +YA+ + A VF+ +P+ + +VSW+A+++ YA+
Sbjct: 147 FVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQ 206
Query: 255 NGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSIL 314
NG+P EALE+F +M D P+ V +VSVL A L+QG+ IHA +++ GL+
Sbjct: 207 NGEPMEALEIFSQM--RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP 266
Query: 315 PVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDH 374
++ +L TMYA+CG++ + +++FD+M +++LWN++IS Y +GY R+AI +F EMI+
Sbjct: 267 DLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK 326
Query: 375 GFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDE 434
P IS S + AC+ G +E+ + ++E V + V + ++D+ + + E
Sbjct: 327 DVRPDTISITSAISACAQVGSLEQARSMYE-YVGRSDYRDDVFISSALIDMFAKCGSV-E 386
Query: 435 AAKIIEDLRIEPGPKVWGSLLGACRIH 460
A+++ D ++ VW +++ +H
Sbjct: 387 GARLVFDRTLDRDVVVWSAMIVGYGLH 402
BLAST of Csa1G524740 vs. Swiss-Prot
Match:
PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1)
HSP 1 Score: 461.5 bits (1186), Expect = 1.6e-128
Identity = 241/591 (40.78%), Postives = 355/591 (60.07%), Query Frame = 1
Query: 61 LSHESNPTQQTCELLIL--SAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELD 120
L +ES T LL + + A L + +H L G ++ T I+++S+
Sbjct: 211 LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270
Query: 121 TVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLK 180
+ +F + RK I +NA+ G L L+ + + G T L+
Sbjct: 271 KIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVP 330
Query: 181 ACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVK 240
V+ ++ + IH + L+ + +H V T L +Y++ + A +FDE P K
Sbjct: 331 --VSGHLMLIYA-----IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEK 390
Query: 241 NVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKL 300
++ SW+AMI+ Y +NG +A+ LFREM + PN VT+ +L ACA AL GK
Sbjct: 391 SLPSWNAMISGYTQNGLTEDAISLFREMQKSEFS--PNPVTITCILSACAQLGALSLGKW 450
Query: 301 IHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGY 360
+H + +S + V +ALI MYA+CG + + +FD M KK+ V WN++IS YGLHG
Sbjct: 451 VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQ 510
Query: 361 GRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYA 420
G++A+ IF EM++ G +P+ ++F+ VL ACSH GLV+EG ++F SM+ +G +PSV+HYA
Sbjct: 511 GQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA 570
Query: 421 CMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPT 480
CMVD+LGRA L A + IE + IEPG VW +LLGACRIH LA S++LF+L+P
Sbjct: 571 CMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPD 630
Query: 481 NAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQ 540
N G +VLL++I++ + + V++ R+L K PG + IE+ + FTS D+ +PQ
Sbjct: 631 NVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQ 690
Query: 541 GEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGD 600
++++ L L +M++ GY P+T+L L+D+++EE+E +V HSE+LA+AFGLI T G
Sbjct: 691 VKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGT 750
Query: 601 TIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
IRI KNLR+C DCH+VTK ISK +R I+VRD NRFHHFKDGVCSCGDYW
Sbjct: 751 EIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
HSP 2 Score: 147.9 bits (372), Expect = 3.8e-34
Identity = 101/398 (25.38%), Postives = 191/398 (47.99%), Query Frame = 1
Query: 62 SHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVD 121
S + P T I +A+ +H V G D + L + ++ M+ + V+
Sbjct: 112 STDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVE 171
Query: 122 NARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACV 181
+ARKVFD+ ++ +WN + + ++++ +++ S R T LL
Sbjct: 172 DARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF--RDLINESCTRLDTTTLLDILP 231
Query: 182 ASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVV 241
A L L+ G +IH+ + G +H +V+T + +Y++ G + SA+F E ++V
Sbjct: 232 AVAELQE-LRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIV 291
Query: 242 SWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHA 301
+++AMI Y NG+ +L LF+E+ML+ + S T+VS++ + IH
Sbjct: 292 AYNAMIHGYTSNGETELSLSLFKELMLS--GARLRSSTLVSLVPVSGHLMLIYA---IHG 351
Query: 302 YILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRK 361
Y L+ S V +AL T+Y++ ++ES + +FD +K + WN++IS Y +G
Sbjct: 352 YCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 411
Query: 362 AIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMV 421
AI +F EM FSP+ ++ +L AC+ G + GK + + +V+ + S+ ++
Sbjct: 412 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHD-LVRSTDFESSIYVSTALI 471
Query: 422 DLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIH 460
+ + + EA ++ DL + W +++ +H
Sbjct: 472 GMYAKCGSIAEARRLF-DLMTKKNEVTWNTMISGYGLH 499
HSP 3 Score: 129.8 bits (325), Expect = 1.1e-28
Identity = 86/342 (25.15%), Postives = 162/342 (47.37%), Query Frame = 1
Query: 60 LLSHESNPTQQTCELLILSAA------RRNSLSDALDVHQLLVDGGFDQDPFLATKLINM 119
LL S+ T +T LI R S+S H ++ GF D L TKL
Sbjct: 2 LLRTVSSATAETTAALISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQR 61
Query: 120 FSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMM-GVSSDRFT 179
S+L + AR +F ++ ++++N L R ++ + L ++ + + + T
Sbjct: 62 LSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSST 121
Query: 180 YTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVF 239
Y + + A + G+ IH + G + + + + ++ MY +F V A VF
Sbjct: 122 YAFAISAASGFRDD----RAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVF 181
Query: 240 DEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAA 299
D MP K+ + W+ MI+ Y KN E++++FR++ +N + ++ T++ +L A A
Sbjct: 182 DRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL-INESCTRLDTTTLLDILPAVAELQE 241
Query: 300 LEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISS 359
L G IH+ + G S V++ I++Y++CGK++ G +F K D+V +N++I
Sbjct: 242 LRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHG 301
Query: 360 YGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLV 395
Y +G ++ +F+E++ G + +S++ H L+
Sbjct: 302 YTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI 338
BLAST of Csa1G524740 vs. TrEMBL
Match:
F6GUX8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g05500 PE=4 SV=1)
HSP 1 Score: 1001.5 bits (2588), Expect = 4.7e-289
Identity = 499/658 (75.84%), Postives = 559/658 (84.95%), Query Frame = 1
Query: 1 MWALRTPYSTHYP----PSSPRYSTSKLSVSSFSFNPSTPPNSN-----NNHLIQSLCKQ 60
MWA +TP + P P + S + PST SN NN LIQSLCKQ
Sbjct: 1 MWAFQTPQTIQQPHLPKPFHKPTAISPKPQCCLALRPSTTTRSNGDSNNNNPLIQSLCKQ 60
Query: 61 GNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLI 120
GNL QAL +LS E NPTQ T ELLILS R+NSL +D+H+ L+ G DQDPFLATKLI
Sbjct: 61 GNLNQALQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLI 120
Query: 121 NMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRF 180
NM+SELD++DNARKVFDKTRKRTIYVWNALFRAL LAG G +VL+LY RMN +GV SDRF
Sbjct: 121 NMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRF 180
Query: 181 TYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAV 240
TYTY+LKACVASE VS L G+EIH HILRHG+ HVH+MTTL+DMYARFGCV AS V
Sbjct: 181 TYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRV 240
Query: 241 FDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFA 300
FD+MPVKNVVSWSAMIACY+KNGKP EALELFR+MML D +PNSVTMVSVLQACAA A
Sbjct: 241 FDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALA 300
Query: 301 ALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLIS 360
ALEQGKL+H YILRRGLDSILPV+SAL+T+YARCG LE G +F+RM K+DVV WNSLIS
Sbjct: 301 ALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLIS 360
Query: 361 SYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQ 420
SYG+HG+GRKAI+IF+EMID G SPS ISF+SVLGACSH GLVEEGK LFESMV+ H I
Sbjct: 361 SYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIF 420
Query: 421 PSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKR 480
PSVEHYACMVDLLGRANRLDEAAKII+D+RIEPGPKVWGSLLG+CRIHC+VELAERA+ R
Sbjct: 421 PSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVELAERATSR 480
Query: 481 LFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTS 540
LF+LEPTNAGNYVLLADIYAEA+MW+EVKRVK LL++R LQKVPGRS IE+RRKIYSF S
Sbjct: 481 LFELEPTNAGNYVLLADIYAEAKMWNEVKRVKMLLEARGLQKVPGRSCIEIRRKIYSFMS 540
Query: 541 VDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGL 600
VDEFNPQ EQLHALL+ LS EMK++GY P TK+VLYDLD EEKERIVLGHSEKLA+AFGL
Sbjct: 541 VDEFNPQIEQLHALLLKLSMEMKEKGYVPDTKVVLYDLDPEEKERIVLGHSEKLALAFGL 600
Query: 601 INTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
IN+ KG+TIRITKNLRLCEDCHSVTKFISKFA+REI+VRD+NRFH F+DGVCSCGDYW
Sbjct: 601 INSKKGETIRITKNLRLCEDCHSVTKFISKFANREILVRDVNRFHLFQDGVCSCGDYW 658
BLAST of Csa1G524740 vs. TrEMBL
Match:
A0A061GWW5_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein OS=Theobroma cacao GN=TCM_041754 PE=4 SV=1)
HSP 1 Score: 1000.3 bits (2585), Expect = 1.0e-288
Identity = 492/651 (75.58%), Postives = 570/651 (87.56%), Query Frame = 1
Query: 1 MWALRTPYSTHYPP-SSPRYSTSKLSVSSFSFNPS-TPPNSNNNHLIQSLCKQGNLKQAL 60
MWA +P T P S+P ++ KL SS + NPS + N NNN LIQSLCK+GNLKQA
Sbjct: 1 MWAFHSPQPTQPPSLSNPPRTSPKLPSSSLTLNPSISTSNLNNNQLIQSLCKEGNLKQAF 60
Query: 61 YLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELD 120
LLS E NP+Q+T ELLILS A +NSLS A +H + GFDQDPFL TKLI+M+S LD
Sbjct: 61 KLLSQEPNPSQRTYELLILSCAHQNSLSLAQSLHSHISQNGFDQDPFLVTKLISMYSALD 120
Query: 121 TVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLK 180
++D+ARK+FDKTRKRTI+VWNALFRAL LAG G +VL LY +MN G+ SDRFTYTY+LK
Sbjct: 121 SLDDARKLFDKTRKRTIFVWNALFRALTLAGFGEEVLGLYRQMNRTGIPSDRFTYTYVLK 180
Query: 181 ACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVK 240
ACVASECLVS L+KGKEIHA+ILRHGY AHVH+MTTL+DMYARFGCVS AS VF EMPV+
Sbjct: 181 ACVASECLVSLLKKGKEIHAYILRHGYEAHVHIMTTLVDMYARFGCVSCASFVFGEMPVR 240
Query: 241 NVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKL 300
NVVSWSAMIACYAKNGK +EALELFREMM+ THDS PNSVTMVSVLQACAA AALEQGKL
Sbjct: 241 NVVSWSAMIACYAKNGKSFEALELFREMMVETHDSFPNSVTMVSVLQACAALAALEQGKL 300
Query: 301 IHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGY 360
IHAYILRRGLDS+LPVISALITMY+RCGKLE GQ IFD+M K+DVV WNSLISSY +HG+
Sbjct: 301 IHAYILRRGLDSVLPVISALITMYSRCGKLELGQRIFDQMEKRDVVSWNSLISSYAVHGF 360
Query: 361 GRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYA 420
G+KAI+IF+EMI G SPS ++F+SVLGACSH GLVEEGK LF+SM KEHGI PSVEHYA
Sbjct: 361 GKKAIQIFQEMIHQGVSPSPVTFVSVLGACSHAGLVEEGKWLFDSMHKEHGIYPSVEHYA 420
Query: 421 CMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPT 480
CMVDLLGRANRL+EAA+II+++RIEPG KVWGSLLG+CRIHC+V+LAERAS RLF+LEP
Sbjct: 421 CMVDLLGRANRLEEAARIIDEMRIEPGAKVWGSLLGSCRIHCNVDLAERASSRLFQLEPV 480
Query: 481 NAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQ 540
+AGNYVLLADIYAEA+MWDEVKRV+KLL++R LQKVPGRSWIEV+RKIYSF SVDE NPQ
Sbjct: 481 SAGNYVLLADIYAEAKMWDEVKRVRKLLETRSLQKVPGRSWIEVKRKIYSFVSVDESNPQ 540
Query: 541 GEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGD 600
E++ + L+ LS EMK++GY PQTK+VLYDL++ EKERI+LGHSEKLAVAFGLINT+KG+
Sbjct: 541 IEEIQSFLIKLSAEMKEKGYVPQTKVVLYDLNEGEKERILLGHSEKLAVAFGLINTNKGE 600
Query: 601 TIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
TIRITKNLRLCEDCH++TKFISKFA++EI+VRD+NRFHHF++GVCSC DYW
Sbjct: 601 TIRITKNLRLCEDCHTLTKFISKFANKEILVRDVNRFHHFQNGVCSCDDYW 651
BLAST of Csa1G524740 vs. TrEMBL
Match:
V4S0Q9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025096mg PE=4 SV=1)
HSP 1 Score: 1000.0 bits (2584), Expect = 1.4e-288
Identity = 501/652 (76.84%), Postives = 562/652 (86.20%), Query Frame = 1
Query: 4 LRTPYST----HYPPSSPRYSTSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALY 63
LR+PY T H PP P +S++S S P++ + N N LIQSLCKQGNLKQAL
Sbjct: 13 LRSPYHTNSIAHLPPK-PSSVCCCVSLNS-STTPTSLSSRNKNELIQSLCKQGNLKQALD 72
Query: 64 LLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDT 123
+LS E NPTQ T ELL+LS A NSLSDAL+VH L D GFDQDPFL TKLIN++S D+
Sbjct: 73 VLSSEPNPTQHTYELLLLSCAHHNSLSDALNVHCHLTDNGFDQDPFLVTKLINVYSHFDS 132
Query: 124 VDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMG--VSSDRFTYTYLL 183
VD+AR VFDKTR+RTIYVWNALFRAL LAGRG +VLELY RMN G + SDRFTYTY+L
Sbjct: 133 VDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVL 192
Query: 184 KACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPV 243
KACVAS C S L+ GKEIHA +LRHGY VH+MTTL+DMYARFGCV YA VF +M V
Sbjct: 193 KACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAV 252
Query: 244 KNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGK 303
KNVVSWSAMIACYA+NG +EALELFREM++ +HD PNSVTMVSVLQACAA AALEQGK
Sbjct: 253 KNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGK 312
Query: 304 LIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHG 363
+IH YILRRGLDSILPV+SAL+TMYARCGKLE GQ +FD M K+DVV WNSLISSYG+HG
Sbjct: 313 MIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHG 372
Query: 364 YGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHY 423
YG KAI+IF+EMI HG SPS ISF+SVLGACSH GLVEEGK LFESM KEH ++PSVEHY
Sbjct: 373 YGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHY 432
Query: 424 ACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEP 483
ACMVDLLGRAN+L+EAAKIIEDLRIEPGPKVWGSLLG+CRIHC+VELAERASKRLF+LEP
Sbjct: 433 ACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEP 492
Query: 484 TNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNP 543
TNAGNYVLLAD+YA A+MWDEVKRVK+LL++R LQKVPGRS IEV+RK+YSF SVDEFNP
Sbjct: 493 TNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDEFNP 552
Query: 544 QGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKG 603
Q EQLHALL+NLS EMK++GY PQTK+VLYDLD EEKERIVLGHSEKLAVAFGLINTSKG
Sbjct: 553 QFEQLHALLINLSAEMKEKGYVPQTKVVLYDLDAEEKERIVLGHSEKLAVAFGLINTSKG 612
Query: 604 DTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
+TIRITKNLRLCEDCHS TKFISKFA++EI+VRD+NRFHHF +GVCSCGDYW
Sbjct: 613 ETIRITKNLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFHNGVCSCGDYW 662
BLAST of Csa1G524740 vs. TrEMBL
Match:
A0A0D2RLL5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G128500 PE=4 SV=1)
HSP 1 Score: 997.7 bits (2578), Expect = 6.8e-288
Identity = 491/652 (75.31%), Postives = 572/652 (87.73%), Query Frame = 1
Query: 1 MWALRTPYSTHYPPS--SPRYSTSKLSVSSFSFNPSTPPNS-NNNHLIQSLCKQGNLKQA 60
MWA TP T PPS +P + KL SS + NPS ++ N+N LIQSLCKQG+LKQA
Sbjct: 1 MWAFHTPQPTQ-PPSLFNPPRTPPKLPSSSLTLNPSISNSTPNHNQLIQSLCKQGDLKQA 60
Query: 61 LYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSEL 120
LLS E NP+Q+T E+LILS A +NSLS A +H + + GFDQDPFL TKLI+M++ L
Sbjct: 61 FKLLSREPNPSQRTYEVLILSCADQNSLSLAQSLHSHISENGFDQDPFLVTKLISMYAAL 120
Query: 121 DTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLL 180
D++D+ARKVFDKTRKRTI+VWNALFRAL LAG G +VL LY +MN +G+ SDRFTYTY+L
Sbjct: 121 DSLDDARKVFDKTRKRTIFVWNALFRALTLAGFGEEVLGLYRKMNRIGLPSDRFTYTYVL 180
Query: 181 KACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPV 240
KACVASEC+VS L KGKEIHAHILRHG +VH+MTTL+DMYARFGCV++AS VF++MPV
Sbjct: 181 KACVASECMVSLLNKGKEIHAHILRHGLEGYVHIMTTLVDMYARFGCVAHASFVFEKMPV 240
Query: 241 KNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGK 300
+NVVSWSAM+ACYAKNGKP+EALELFREMM+ T DS PNSVTMVSVLQACAA +ALEQGK
Sbjct: 241 RNVVSWSAMMACYAKNGKPFEALELFREMMIETQDSAPNSVTMVSVLQACAALSALEQGK 300
Query: 301 LIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHG 360
L+HAYILRRGLDS+LPVISALITMYARCG+LE GQ IFDRM K+DVV WNSLISSYGLHG
Sbjct: 301 LVHAYILRRGLDSVLPVISALITMYARCGELELGQRIFDRMEKRDVVSWNSLISSYGLHG 360
Query: 361 YGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHY 420
YG+KA++IF+EMI G SPS I+F+SVLGACSH GLVEEGKKLF+SM KEHGI PSVEHY
Sbjct: 361 YGKKAMQIFQEMIHQGVSPSSITFVSVLGACSHAGLVEEGKKLFDSMRKEHGIHPSVEHY 420
Query: 421 ACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEP 480
ACMVDLLGRANRL+EAAKII+++RIEPG KVWGSLLG+CRIHC+VELAERAS RLF+LEP
Sbjct: 421 ACMVDLLGRANRLEEAAKIIDEMRIEPGAKVWGSLLGSCRIHCNVELAERASHRLFQLEP 480
Query: 481 TNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNP 540
+AGNYVLLADIYAEAEMWD+VKRV+KLL++R LQKV GRSWIEVRRK+YSF SVDE NP
Sbjct: 481 HSAGNYVLLADIYAEAEMWDDVKRVRKLLETRSLQKVAGRSWIEVRRKMYSFVSVDEPNP 540
Query: 541 QGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKG 600
Q E + +LL+ L+ EMK++GY+PQTK+VLYDLD+ EKERI+LGHSEKLAVAFGLINT KG
Sbjct: 541 QIELIQSLLIKLAAEMKEKGYSPQTKVVLYDLDESEKERILLGHSEKLAVAFGLINTKKG 600
Query: 601 DTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
+TIRITKNLRLCEDCHS TKFISKF+++EI+VRD+NRFHHF++GVCSCGDYW
Sbjct: 601 ETIRITKNLRLCEDCHSFTKFISKFSNKEILVRDVNRFHHFQNGVCSCGDYW 651
BLAST of Csa1G524740 vs. TrEMBL
Match:
A0A067D6U3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g006076mg PE=4 SV=1)
HSP 1 Score: 997.3 bits (2577), Expect = 8.8e-288
Identity = 499/652 (76.53%), Postives = 562/652 (86.20%), Query Frame = 1
Query: 4 LRTPYST----HYPPSSPRYSTSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALY 63
LR+PY T H PP P +S++S S P++ + N N LIQSLCKQGNL+QAL
Sbjct: 13 LRSPYHTNSIAHLPPK-PSSVCCCVSLNS-STTPTSLSSRNKNELIQSLCKQGNLRQALD 72
Query: 64 LLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDT 123
+LS E NPTQ T ELL+LS NSLSDAL+VH L D GFDQDPFL TKLIN++S D+
Sbjct: 73 VLSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDS 132
Query: 124 VDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMG--VSSDRFTYTYLL 183
VD+AR VFDKTR+RTIYVWNALFRAL LAGRG +VLELY RMN G + SDRFTYTY+L
Sbjct: 133 VDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVL 192
Query: 184 KACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPV 243
KACVAS C S L+ GKEIHA +LRHGY VH+MTTL+DMYARFGCV YA VF +M V
Sbjct: 193 KACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAV 252
Query: 244 KNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGK 303
KNVVSWSAMIACYA+NG +EALELFREM++ +HD PNSVTMVSVLQACAA AALEQGK
Sbjct: 253 KNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGK 312
Query: 304 LIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHG 363
+IH YILRRGLDSILPV+SAL+TMYARCGKLE GQ +FD M K+DVV WNSLISSYG+HG
Sbjct: 313 MIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHG 372
Query: 364 YGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHY 423
YG KAI+IF+EMI HG SPS ISF+SVLGACSH GLVEEGK LFESM KEH I+PSVEHY
Sbjct: 373 YGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMIRPSVEHY 432
Query: 424 ACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEP 483
ACMVDLLGRAN+L+EAAKIIEDLRIEPGPKVWGSLLG+CRIHC+VELAERASKRLF+LEP
Sbjct: 433 ACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEP 492
Query: 484 TNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNP 543
TNAGNYVLLAD+YA A+MWDEVKRVK+LL++R LQKVPGRS IEV+RK+YSF SVDEF+P
Sbjct: 493 TNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRIEVKRKMYSFVSVDEFHP 552
Query: 544 QGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKG 603
Q EQLHALL+NLS EMK++GY PQTK+VLYDLD EEKERIVLGHSEKLAVAFGLINTSKG
Sbjct: 553 QFEQLHALLINLSAEMKEKGYVPQTKVVLYDLDAEEKERIVLGHSEKLAVAFGLINTSKG 612
Query: 604 DTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
+TIRITKNLRLCEDCHS TKFISKFA++EI+VRD+NRFHHF++GVCSCGDYW
Sbjct: 613 ETIRITKNLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRNGVCSCGDYW 662
BLAST of Csa1G524740 vs. TAIR10
Match:
AT3G46790.1 (AT3G46790.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 965.3 bits (2494), Expect = 1.9e-281
Identity = 472/645 (73.18%), Postives = 550/645 (85.27%), Query Frame = 1
Query: 6 TPYSTHYPPSSPRYSTS-KLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALYLLSHE 65
T ++ ++ P SP S +++++ S + +NN LIQSLCK+G LKQA+ +LS E
Sbjct: 13 TYHTVNFLPRSPLKPPSCSVALNNPSISSGAGAKISNNQLIQSLCKEGKLKQAIRVLSQE 72
Query: 66 SNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNAR 125
S+P+QQT ELLIL R+SLSDAL VH+ ++D G DQDPFLATKLI M+S+L +VD AR
Sbjct: 73 SSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYAR 132
Query: 126 KVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASE 185
KVFDKTRKRTIYVWNALFRAL LAG G +VL LY +MN +GV SDRFTYTY+LKACVASE
Sbjct: 133 KVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASE 192
Query: 186 CLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWS 245
C V+ L KGKEIHAH+ R GY +HV++MTTL+DMYARFGCV YAS VF MPV+NVVSWS
Sbjct: 193 CTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWS 252
Query: 246 AMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYIL 305
AMIACYAKNGK +EAL FREMM T DS PNSVTMVSVLQACA+ AALEQGKLIH YIL
Sbjct: 253 AMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYIL 312
Query: 306 RRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIK 365
RRGLDSILPVISAL+TMY RCGKLE GQ +FDRMH +DVV WNSLISSYG+HGYG+KAI+
Sbjct: 313 RRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQ 372
Query: 366 IFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLL 425
IFEEM+ +G SP+ ++F+SVLGACSH GLVEEGK+LFE+M ++HGI+P +EHYACMVDLL
Sbjct: 373 IFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLL 432
Query: 426 GRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYV 485
GRANRLDEAAK+++D+R EPGPKVWGSLLG+CRIH +VELAERAS+RLF LEP NAGNYV
Sbjct: 433 GRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYV 492
Query: 486 LLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHA 545
LLADIYAEA+MWDEVKRVKKLL+ R LQK+PGR W+EVRRK+YSF SVDEFNP EQ+HA
Sbjct: 493 LLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHA 552
Query: 546 LLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITK 605
LV L+ +MK++GY PQTK VLY+L+ EEKERIVLGHSEKLA+AFGLINTSKG+ IRITK
Sbjct: 553 FLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITK 612
Query: 606 NLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
NLRLCEDCH TKFISKF ++EI+VRD+NRFH FK+GVCSCGDYW
Sbjct: 613 NLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
BLAST of Csa1G524740 vs. TAIR10
Match:
AT4G18750.1 (AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 472.6 bits (1215), Expect = 3.8e-133
Identity = 235/559 (42.04%), Postives = 348/559 (62.25%), Query Frame = 1
Query: 91 VHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGR 150
VH + V F ++ L++M+S+ +D+A+ VF + R++ + ++ A G
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 151 GNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVH 210
+ ++L+ M G+S D +T T +L C L +GK +H I + G +
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYR----LLDEGKRVHEWIKENDLGFDIF 437
Query: 211 VMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNT 270
V LMDMYA+ G + A VF EM VK+++SW+ +I Y+KN EAL LF ++L
Sbjct: 438 VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN-LLLEE 497
Query: 271 HDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLES 330
P+ T+ VL ACA+ +A ++G+ IH YI+R G S V ++L+ MYA+CG L
Sbjct: 498 KRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLL 557
Query: 331 GQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSH 390
++FD + KD+V W +I+ YG+HG+G++AI +F +M G ISF+S+L ACSH
Sbjct: 558 AHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSH 617
Query: 391 TGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWG 450
+GLV+EG + F M E I+P+VEHYAC+VD+L R L +A + IE++ I P +WG
Sbjct: 618 SGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWG 677
Query: 451 SLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRE 510
+LL CRIH V+LAE+ ++++F+LEP N G YVL+A+IYAEAE W++VKR++K + R
Sbjct: 678 ALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRG 737
Query: 511 LQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLD 570
L+K PG SWIE++ ++ F + D NP+ E + A L + M + GY+P TK L D +
Sbjct: 738 LRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAE 797
Query: 571 QEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVR 630
+ EKE + GHSEKLA+A G+I++ G IR+TKNLR+C DCH + KF+SK REI++R
Sbjct: 798 EMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLR 857
Query: 631 DLNRFHHFKDGVCSCGDYW 650
D NRFH FKDG CSC +W
Sbjct: 858 DSNRFHQFKDGHCSCRGFW 871
HSP 2 Score: 184.9 bits (468), Expect = 1.6e-46
Identity = 116/427 (27.17%), Postives = 214/427 (50.12%), Query Frame = 1
Query: 42 NHLIQSLCKQGNLKQALYLLSHESN---PTQQTCELLILSAARRNSLSDALDVHQLLVDG 101
N ++ C+ GNL+ A+ LL + C +L L A + SL D +V +
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSK-SLKDGKEVDNFIRGN 124
Query: 102 GFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELY 161
GF D L +KL M++ + A +VFD+ + WN L LA +G + + L+
Sbjct: 125 GFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 184
Query: 162 PRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDM 221
+M GV D +T++ + K+ + + + G+++H IL+ G+G V +L+
Sbjct: 185 KKMMSSGVEMDSYTFSCVSKSFSS----LRSVHGGEQLHGFILKSGFGERNSVGNSLVAF 244
Query: 222 YARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSV 281
Y + V A VFDEM ++V+SW+++I Y NG + L +F +M+++ + +
Sbjct: 245 YLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI--DLA 304
Query: 282 TMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRM 341
T+VSV CA + G+ +H+ ++ + L+ MY++CG L+S + +F M
Sbjct: 305 TIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM 364
Query: 342 HKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGK 401
+ VV + S+I+ Y G +A+K+FEEM + G SP + +VL C+ L++EGK
Sbjct: 365 SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGK 424
Query: 402 KLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRI 461
++ E +KE+ + + ++D+ + + EA + ++R++ W +++G
Sbjct: 425 RVHE-WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS-WNTIIGGYSK 482
Query: 462 HCHVELA 466
+C+ A
Sbjct: 485 NCYANEA 482
HSP 3 Score: 174.9 bits (442), Expect = 1.7e-43
Identity = 110/404 (27.23%), Postives = 197/404 (48.76%), Query Frame = 1
Query: 42 NHLIQSLCKQGNLKQALYL----LSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVD 101
N L+ L K G+ ++ L +S T + S + S+ +H ++
Sbjct: 164 NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILK 223
Query: 102 GGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLEL 161
GF + + L+ + + VD+ARKVFD+ +R + WN++ G L +
Sbjct: 224 SGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSV 283
Query: 162 YPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMD 221
+ +M + G+ D T + C S L+S G+ +H+ ++ + TL+D
Sbjct: 284 FVQMLVSGIEIDLATIVSVFAGCADSR-LISL---GRAVHSIGVKACFSREDRFCNTLLD 343
Query: 222 MYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNS 281
MY++ G + A AVF EM ++VVS+++MIA YA+ G EA++LF EM P+
Sbjct: 344 MYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM--EEEGISPDV 403
Query: 282 VTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDR 341
T+ +VL CA + L++GK +H +I L + V +AL+ MYA+CG ++ +L+F
Sbjct: 404 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSE 463
Query: 342 MHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDH-GFSPSHISFISVLGACSHTGLVEE 401
M KD++ WN++I Y + Y +A+ +F +++ FSP + VL AC+ ++
Sbjct: 464 MRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDK 523
Query: 402 GKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDL 441
G+++ + +G +VD+ + L A + +D+
Sbjct: 524 GREI-HGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 560
BLAST of Csa1G524740 vs. TAIR10
Match:
AT4G33990.1 (AT4G33990.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 467.6 bits (1202), Expect = 1.2e-131
Identity = 236/609 (38.75%), Postives = 375/609 (61.58%), Query Frame = 1
Query: 42 NHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFD 101
N +I C+ GN K+AL L + T L+ + + + +H + G +
Sbjct: 220 NAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLE 279
Query: 102 QDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRM 161
+ F++ KLI++++E + + +KVFD+ R + WN++ +A L + + L+ M
Sbjct: 280 SELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM 339
Query: 162 NMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAH-VHVMTTLMDMYA 221
+ + D T L A + S+ + ++ + + LR G+ + + ++ MYA
Sbjct: 340 RLSRIQPDCLTLISL--ASILSQ--LGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYA 399
Query: 222 RFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTM 281
+ G V A AVF+ +P +V+SW+ +I+ YA+NG EA+E++ +M + N T
Sbjct: 400 KLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYN-IMEEEGEIAANQGTW 459
Query: 282 VSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHK 341
VSVL AC+ AL QG +H +L+ GL + V+++L MY +CG+LE +F ++ +
Sbjct: 460 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 519
Query: 342 KDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKL 401
+ V WN+LI+ +G HG+G KA+ +F+EM+D G P HI+F+++L ACSH+GLV+EG+
Sbjct: 520 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWC 579
Query: 402 FESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHC 461
FE M ++GI PS++HY CMVD+ GRA +L+ A K I+ + ++P +WG+LL ACR+H
Sbjct: 580 FEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 639
Query: 462 HVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWI 521
+V+L + AS+ LF++EP + G +VLL+++YA A W+ V ++ + + L+K PG S +
Sbjct: 640 NVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSM 699
Query: 522 EVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLG 581
EV K+ F + ++ +P E+++ L L ++K GY P + VL D++ +EKE I++
Sbjct: 700 EVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMS 759
Query: 582 HSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKD 641
HSE+LA+AF LI T TIRI KNLR+C DCHSVTKFISK +REI+VRD NRFHHFK+
Sbjct: 760 HSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKN 819
Query: 642 GVCSCGDYW 650
GVCSCGDYW
Sbjct: 820 GVCSCGDYW 823
HSP 2 Score: 188.0 bits (476), Expect = 1.9e-47
Identity = 125/440 (28.41%), Postives = 224/440 (50.91%), Query Frame = 1
Query: 42 NHLIQSLCKQGNLKQ-----ALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLV 101
N +I + GN + +L++LS P +T +L A R ++ D +H L +
Sbjct: 121 NLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPS-VLKACR--TVIDGNKIHCLAL 180
Query: 102 DGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLE 161
GF D ++A LI+++S V NAR +FD+ R + WNA+ +G + L
Sbjct: 181 KFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT 240
Query: 162 LYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLM 221
L + M D T LL AC + +G IH++ ++HG + + V L+
Sbjct: 241 LSNGLRAM----DSVTVVSLLSACTEA----GDFNRGVTIHSYSIKHGLESELFVSNKLI 300
Query: 222 DMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPN 281
D+YA FG + VFD M V++++SW+++I Y N +P A+ LF+EM L+ P+
Sbjct: 301 DLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQ--PD 360
Query: 282 SVTMVSVLQACAAFAALEQGKLIHAYILRRG--LDSILPVISALITMYARCGKLESGQLI 341
+T++S+ + + + + + LR+G L+ I + +A++ MYA+ G ++S + +
Sbjct: 361 CLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDI-TIGNAVVVMYAKLGLVDSARAV 420
Query: 342 FDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHG-FSPSHISFISVLGACSHTGL 401
F+ + DV+ WN++IS Y +G+ +AI+++ M + G + + +++SVL ACS G
Sbjct: 421 FNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 480
Query: 402 VEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDL-RIEPGPKVWGSL 461
+ +G KL ++K +G+ V + D+ G+ RL++A + + R+ P W +L
Sbjct: 481 LRQGMKLHGRLLK-NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP--WNTL 540
Query: 462 LGACRIHCHVELAERASKRL 473
+ H H E A K +
Sbjct: 541 IACHGFHGHGEKAVMLFKEM 543
HSP 3 Score: 173.3 bits (438), Expect = 4.8e-43
Identity = 104/310 (33.55%), Postives = 165/310 (53.23%), Query Frame = 1
Query: 84 SLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFR 143
+L A +H LV Q+ ++ KL+N++ L V AR FD + R +Y WN +
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 144 ALALAGRGNDVLELYPR-MNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILR 203
AG ++V+ + M G++ D T+ +LKAC + G +IH L+
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRT-------VIDGNKIHCLALK 185
Query: 204 HGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALEL 263
G+ V+V +L+ +Y+R+ V A +FDEMPV+++ SW+AMI+ Y ++G EAL L
Sbjct: 186 FGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL 245
Query: 264 FREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMY 323
+ +SVT+VS+L AC +G IH+Y ++ GL+S L V + LI +Y
Sbjct: 246 SNGLR------AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 305
Query: 324 ARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFI 383
A G+L Q +FDRM+ +D++ WNS+I +Y L+ +AI +F+EM P ++ I
Sbjct: 306 AEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLI 362
Query: 384 SVLGACSHTG 393
S+ S G
Sbjct: 366 SLASILSQLG 362
HSP 4 Score: 98.2 bits (243), Expect = 2.0e-20
Identity = 68/270 (25.19%), Postives = 130/270 (48.15%), Query Frame = 1
Query: 190 LQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIAC 249
LQ K +HA ++ +V + L+++Y G V+ A FD + ++V +W+ MI+
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 250 YAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLD 309
Y + G E + F ML++ P+ T SVL+AC + G IH L+ G
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSS-GLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFM 186
Query: 310 SILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEM 369
+ V ++LI +Y+R + + +++FD M +D+ WN++IS Y G ++A+ + +
Sbjct: 187 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 246
Query: 370 IDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANR 429
+ ++ +S+L AC+ G G + +K HG++ + ++DL R
Sbjct: 247 ----RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYAEFGR 306
Query: 430 LDEAAKIIEDLRIEPGPKVWGSLLGACRIH 460
L + K+ + + + W S++ A ++
Sbjct: 307 LRDCQKVFDRMYVRDLIS-WNSIIKAYELN 326
BLAST of Csa1G524740 vs. TAIR10
Match:
AT3G12770.1 (AT3G12770.1 mitochondrial editing factor 22)
HSP 1 Score: 464.5 bits (1194), Expect = 1.0e-130
Identity = 243/623 (39.00%), Postives = 377/623 (60.51%), Query Frame = 1
Query: 29 FSFNPSTPPNSNNNHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDA 88
F +N S NNH +L N++ A +P T L+ + + + L
Sbjct: 85 FPWNAIIRGYSRNNHFQDALLMYSNMQLA------RVSPDSFTFPHLLKACSGLSHLQMG 144
Query: 89 LDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFD--KTRKRTIYVWNALFRALA 148
VH + GFD D F+ LI ++++ + +AR VF+ +RTI W A+ A A
Sbjct: 145 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 204
Query: 149 LAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYG 208
G + LE++ +M M V D + L+ A CL L++G+ IHA +++ G
Sbjct: 205 QNGEPMEALEIFSQMRKMDVKPD---WVALVSVLNAFTCLQD-LKQGRSIHASVVKMGLE 264
Query: 209 AHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREM 268
++ +L MYA+ G V+ A +FD+M N++ W+AMI+ YAKNG EA+++F EM
Sbjct: 265 IEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM 324
Query: 269 MLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCG 328
+ D P+++++ S + ACA +LEQ + ++ Y+ R + + SALI M+A+CG
Sbjct: 325 I--NKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCG 384
Query: 329 KLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLG 388
+E +L+FDR +DVV+W+++I YGLHG R+AI ++ M G P+ ++F+ +L
Sbjct: 385 SVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLM 444
Query: 389 ACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGP 448
AC+H+G+V EG F M +H I P +HYAC++DLLGRA LD+A ++I+ + ++PG
Sbjct: 445 ACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGV 504
Query: 449 KVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLL 508
VWG+LL AC+ H HVEL E A+++LF ++P+N G+YV L+++YA A +WD V V+ +
Sbjct: 505 TVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRM 564
Query: 509 DSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVL 568
+ L K G SW+EVR ++ +F D+ +P+ E++ + + + +K+ G+ L
Sbjct: 565 KEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASL 624
Query: 569 YDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADRE 628
+DL+ EE E + HSE++A+A+GLI+T +G +RITKNLR C +CH+ TK ISK DRE
Sbjct: 625 HDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDRE 684
Query: 629 IMVRDLNRFHHFKDGVCSCGDYW 650
I+VRD NRFHHFKDGVCSCGDYW
Sbjct: 685 IVVRDTNRFHHFKDGVCSCGDYW 694
HSP 2 Score: 230.7 bits (587), Expect = 2.5e-60
Identity = 131/387 (33.85%), Postives = 216/387 (55.81%), Query Frame = 1
Query: 75 LILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRT 134
LI SA + L +H L+ G FL TKLI+ S + AR+VFD +
Sbjct: 27 LIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQ 86
Query: 135 IYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGK 194
I+ WNA+ R + D L +Y M + VS D FT+ +LLKAC +S LQ G+
Sbjct: 87 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG----LSHLQMGR 146
Query: 195 EIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPV--KNVVSWSAMIACYAK 254
+HA + R G+ A V V L+ +YA+ + A VF+ +P+ + +VSW+A+++ YA+
Sbjct: 147 FVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQ 206
Query: 255 NGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSIL 314
NG+P EALE+F +M D P+ V +VSVL A L+QG+ IHA +++ GL+
Sbjct: 207 NGEPMEALEIFSQM--RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP 266
Query: 315 PVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDH 374
++ +L TMYA+CG++ + +++FD+M +++LWN++IS Y +GY R+AI +F EMI+
Sbjct: 267 DLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK 326
Query: 375 GFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDE 434
P IS S + AC+ G +E+ + ++E V + V + ++D+ + + E
Sbjct: 327 DVRPDTISITSAISACAQVGSLEQARSMYE-YVGRSDYRDDVFISSALIDMFAKCGSV-E 386
Query: 435 AAKIIEDLRIEPGPKVWGSLLGACRIH 460
A+++ D ++ VW +++ +H
Sbjct: 387 GARLVFDRTLDRDVVVWSAMIVGYGLH 402
BLAST of Csa1G524740 vs. TAIR10
Match:
AT4G30700.1 (AT4G30700.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 461.5 bits (1186), Expect = 8.8e-130
Identity = 241/591 (40.78%), Postives = 355/591 (60.07%), Query Frame = 1
Query: 61 LSHESNPTQQTCELLIL--SAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELD 120
L +ES T LL + + A L + +H L G ++ T I+++S+
Sbjct: 211 LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270
Query: 121 TVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLK 180
+ +F + RK I +NA+ G L L+ + + G T L+
Sbjct: 271 KIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVP 330
Query: 181 ACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVK 240
V+ ++ + IH + L+ + +H V T L +Y++ + A +FDE P K
Sbjct: 331 --VSGHLMLIYA-----IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEK 390
Query: 241 NVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKL 300
++ SW+AMI+ Y +NG +A+ LFREM + PN VT+ +L ACA AL GK
Sbjct: 391 SLPSWNAMISGYTQNGLTEDAISLFREMQKSEFS--PNPVTITCILSACAQLGALSLGKW 450
Query: 301 IHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGY 360
+H + +S + V +ALI MYA+CG + + +FD M KK+ V WN++IS YGLHG
Sbjct: 451 VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQ 510
Query: 361 GRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYA 420
G++A+ IF EM++ G +P+ ++F+ VL ACSH GLV+EG ++F SM+ +G +PSV+HYA
Sbjct: 511 GQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA 570
Query: 421 CMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPT 480
CMVD+LGRA L A + IE + IEPG VW +LLGACRIH LA S++LF+L+P
Sbjct: 571 CMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPD 630
Query: 481 NAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQ 540
N G +VLL++I++ + + V++ R+L K PG + IE+ + FTS D+ +PQ
Sbjct: 631 NVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQ 690
Query: 541 GEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGD 600
++++ L L +M++ GY P+T+L L+D+++EE+E +V HSE+LA+AFGLI T G
Sbjct: 691 VKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGT 750
Query: 601 TIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
IRI KNLR+C DCH+VTK ISK +R I+VRD NRFHHFKDGVCSCGDYW
Sbjct: 751 EIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
HSP 2 Score: 147.9 bits (372), Expect = 2.2e-35
Identity = 101/398 (25.38%), Postives = 191/398 (47.99%), Query Frame = 1
Query: 62 SHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVD 121
S + P T I +A+ +H V G D + L + ++ M+ + V+
Sbjct: 112 STDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVE 171
Query: 122 NARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACV 181
+ARKVFD+ ++ +WN + + ++++ +++ S R T LL
Sbjct: 172 DARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF--RDLINESCTRLDTTTLLDILP 231
Query: 182 ASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVV 241
A L L+ G +IH+ + G +H +V+T + +Y++ G + SA+F E ++V
Sbjct: 232 AVAELQE-LRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIV 291
Query: 242 SWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHA 301
+++AMI Y NG+ +L LF+E+ML+ + S T+VS++ + IH
Sbjct: 292 AYNAMIHGYTSNGETELSLSLFKELMLS--GARLRSSTLVSLVPVSGHLMLIYA---IHG 351
Query: 302 YILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRK 361
Y L+ S V +AL T+Y++ ++ES + +FD +K + WN++IS Y +G
Sbjct: 352 YCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 411
Query: 362 AIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMV 421
AI +F EM FSP+ ++ +L AC+ G + GK + + +V+ + S+ ++
Sbjct: 412 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHD-LVRSTDFESSIYVSTALI 471
Query: 422 DLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIH 460
+ + + EA ++ DL + W +++ +H
Sbjct: 472 GMYAKCGSIAEARRLF-DLMTKKNEVTWNTMISGYGLH 499
HSP 3 Score: 129.8 bits (325), Expect = 6.1e-30
Identity = 86/342 (25.15%), Postives = 162/342 (47.37%), Query Frame = 1
Query: 60 LLSHESNPTQQTCELLILSAA------RRNSLSDALDVHQLLVDGGFDQDPFLATKLINM 119
LL S+ T +T LI R S+S H ++ GF D L TKL
Sbjct: 2 LLRTVSSATAETTAALISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQR 61
Query: 120 FSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMM-GVSSDRFT 179
S+L + AR +F ++ ++++N L R ++ + L ++ + + + T
Sbjct: 62 LSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSST 121
Query: 180 YTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVF 239
Y + + A + G+ IH + G + + + + ++ MY +F V A VF
Sbjct: 122 YAFAISAASGFRDD----RAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVF 181
Query: 240 DEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAA 299
D MP K+ + W+ MI+ Y KN E++++FR++ +N + ++ T++ +L A A
Sbjct: 182 DRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL-INESCTRLDTTTLLDILPAVAELQE 241
Query: 300 LEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISS 359
L G IH+ + G S V++ I++Y++CGK++ G +F K D+V +N++I
Sbjct: 242 LRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHG 301
Query: 360 YGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLV 395
Y +G ++ +F+E++ G + +S++ H L+
Sbjct: 302 YTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI 338
BLAST of Csa1G524740 vs. NCBI nr
Match:
gi|449474033|ref|XP_004154055.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Cucumis sativus])
HSP 1 Score: 1311.6 bits (3393), Expect = 0.0e+00
Identity = 649/649 (100.00%), Postives = 649/649 (100.00%), Query Frame = 1
Query: 1 MWALRTPYSTHYPPSSPRYSTSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALYL 60
MWALRTPYSTHYPPSSPRYSTSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALYL
Sbjct: 1 MWALRTPYSTHYPPSSPRYSTSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALYL 60
Query: 61 LSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTV 120
LSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTV
Sbjct: 61 LSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTV 120
Query: 121 DNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKAC 180
DNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKAC
Sbjct: 121 DNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKAC 180
Query: 181 VASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNV 240
VASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNV
Sbjct: 181 VASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNV 240
Query: 241 VSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIH 300
VSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIH
Sbjct: 241 VSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIH 300
Query: 301 AYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGR 360
AYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGR
Sbjct: 301 AYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGR 360
Query: 361 KAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACM 420
KAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACM
Sbjct: 361 KAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACM 420
Query: 421 VDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNA 480
VDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNA
Sbjct: 421 VDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNA 480
Query: 481 GNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGE 540
GNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGE
Sbjct: 481 GNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGE 540
Query: 541 QLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTI 600
QLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTI
Sbjct: 541 QLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTI 600
Query: 601 RITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
RITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW
Sbjct: 601 RITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 649
BLAST of Csa1G524740 vs. NCBI nr
Match:
gi|659115217|ref|XP_008457445.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Cucumis melo])
HSP 1 Score: 1224.9 bits (3168), Expect = 0.0e+00
Identity = 607/653 (92.96%), Postives = 628/653 (96.17%), Query Frame = 1
Query: 1 MWALRTPYSTHYPPSSPRYS----TSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQ 60
MWALRTP+ST YPPSS R+S TSKLSV SFS NPST NSN + LIQSLCK+GNLKQ
Sbjct: 1 MWALRTPHSTQYPPSSRRHSSAHSTSKLSVCSFSLNPSTSANSNKDQLIQSLCKEGNLKQ 60
Query: 61 ALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSE 120
AL LLSHE NPTQQTCELLILSA+RR SLSDALDVHQ LVDGGFDQDPFLATKLINMFSE
Sbjct: 61 ALVLLSHEPNPTQQTCELLILSASRRKSLSDALDVHQHLVDGGFDQDPFLATKLINMFSE 120
Query: 121 LDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYL 180
LD+VDNARKVFDKTRKRTIYVWNALFRALALAG GNDVLELYPRM+MMGV DRFTYTYL
Sbjct: 121 LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGNDVLELYPRMDMMGVPCDRFTYTYL 180
Query: 181 LKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMP 240
LKACVAS+CLVSFLQKGKEIHAHILRHGYGAHVHVMTTL+DMYARFGCVSYASAVFDEMP
Sbjct: 181 LKACVASDCLVSFLQKGKEIHAHILRHGYGAHVHVMTTLVDMYARFGCVSYASAVFDEMP 240
Query: 241 VKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQG 300
VKNVVSWSAMIACYAKNGKPYEALELFR+MMLNTHD VPNSVTMVSVLQACAAFAALEQG
Sbjct: 241 VKNVVSWSAMIACYAKNGKPYEALELFRDMMLNTHDLVPNSVTMVSVLQACAAFAALEQG 300
Query: 301 KLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLH 360
KLIHAYILRRGLDSILPVISAL+TMYARCGKLE GQ+IFDR+HKKDV+LWNSL SSYGLH
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQVIFDRIHKKDVILWNSLFSSYGLH 360
Query: 361 GYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEH 420
GYGRKAI+IFEEMID+G SPS+ISF+SVLGACSH GLVEEGKKLFESMVKEHGIQPSVEH
Sbjct: 361 GYGRKAIEIFEEMIDNGISPSYISFVSVLGACSHAGLVEEGKKLFESMVKEHGIQPSVEH 420
Query: 421 YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLE 480
YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLF+LE
Sbjct: 421 YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480
Query: 481 PTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540
PTNAGNYVLLADIYAEAEMWDEVKRV+KLL+SRELQKVPGRSWIEVRRKIYSFTSVDEFN
Sbjct: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLNSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540
Query: 541 PQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK 600
PQGEQLHALLVNLSNEMKQRGY PQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQGEQLHALLVNLSNEMKQRGYVPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK 600
Query: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 653
BLAST of Csa1G524740 vs. NCBI nr
Match:
gi|645251040|ref|XP_008231496.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Prunus mume])
HSP 1 Score: 1034.2 bits (2673), Expect = 9.4e-299
Identity = 497/610 (81.48%), Postives = 553/610 (90.66%), Query Frame = 1
Query: 40 NNNHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGG 99
N N LIQSLCKQGNL++AL L HE NP+QQT E+LILS SLSD LDVH+ LVDGG
Sbjct: 93 NKNKLIQSLCKQGNLREALQFLPHEPNPSQQTYEILILSCTHHKSLSDGLDVHRHLVDGG 152
Query: 100 FDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYP 159
+DQDPFLATKLI M+SELD++DNARKVFDKT KRTIY+WNALFRAL LAG G +VL+LY
Sbjct: 153 WDQDPFLATKLIEMYSELDSIDNARKVFDKTHKRTIYMWNALFRALTLAGHGTEVLDLYR 212
Query: 160 RMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMY 219
RMN +GVSSDRFTYTY++KACV SECL SFLQKGKEIH HILRHGYGAHVHV+TTL+DMY
Sbjct: 213 RMNTLGVSSDRFTYTYVIKACVVSECLSSFLQKGKEIHGHILRHGYGAHVHVVTTLLDMY 272
Query: 220 ARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVT 279
ARFGCVSYAS+VFD+M ++NVVSWSAMIACYAKNG+PYEALELFREM+L HD +PNSVT
Sbjct: 273 ARFGCVSYASSVFDQMQIRNVVSWSAMIACYAKNGRPYEALELFREMILEAHDLLPNSVT 332
Query: 280 MVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMH 339
MVSVLQACAA ALEQG+ +H YILRRGLDSILPV+S LITMYARCGKL+ G+ +F M+
Sbjct: 333 MVSVLQACAALTALEQGRFLHGYILRRGLDSILPVMSTLITMYARCGKLDLGERVFSMMN 392
Query: 340 KKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKK 399
KKDVV WNSLISSYG+HGYG+KAI+IFE+M+ HG SPSHISF+SVLGACSH GLVEEGK
Sbjct: 393 KKDVVSWNSLISSYGVHGYGKKAIQIFEDMVYHGVSPSHISFVSVLGACSHAGLVEEGKM 452
Query: 400 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIH 459
LF SMVKEHGI PSVEHYACMVDLLGRANR DEAAK+IED+RIEPG KVWG+LLG+CRIH
Sbjct: 453 LFNSMVKEHGIYPSVEHYACMVDLLGRANRFDEAAKVIEDMRIEPGAKVWGALLGSCRIH 512
Query: 460 CHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSW 519
C+VELAERASKRLF+LEP NAGNYVLLADIYAEA+MWDEVKRVKKLL++RELQKVPGRSW
Sbjct: 513 CNVELAERASKRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKKLLEARELQKVPGRSW 572
Query: 520 IEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVL 579
IEV+RKIYSF SVDEFNPQ EQLHALL LS EMK RGY PQTK+VLYDLD+EEKERIVL
Sbjct: 573 IEVKRKIYSFISVDEFNPQMEQLHALLAELSTEMKDRGYKPQTKVVLYDLDEEEKERIVL 632
Query: 580 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFK 639
GHSEKLAVAFGLINT +G+TIRI+KNLRLCEDCH VTKFISKFA+REI+VRD+NRFHHF+
Sbjct: 633 GHSEKLAVAFGLINTKRGETIRISKNLRLCEDCHYVTKFISKFANREILVRDVNRFHHFR 692
Query: 640 DGVCSCGDYW 650
DGVCSC DYW
Sbjct: 693 DGVCSCEDYW 702
BLAST of Csa1G524740 vs. NCBI nr
Match:
gi|694326907|ref|XP_009354345.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Pyrus x bretschneideri])
HSP 1 Score: 1013.4 bits (2619), Expect = 1.7e-292
Identity = 488/610 (80.00%), Postives = 550/610 (90.16%), Query Frame = 1
Query: 40 NNNHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGG 99
+ N LIQSLCKQGNLKQAL L HE NP+QQT ELL+LS SLSD LDVH+ +VDGG
Sbjct: 298 DKNKLIQSLCKQGNLKQALQFLPHEPNPSQQTYELLLLSCTHHKSLSDGLDVHRHIVDGG 357
Query: 100 FDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYP 159
+DQDPFLATKLI M+S LD++DNAR+VFDKTRKRTIY+WNALFRAL LAG G +VL+LY
Sbjct: 358 WDQDPFLATKLIEMYSALDSIDNAREVFDKTRKRTIYMWNALFRALTLAGHGTEVLDLYR 417
Query: 160 RMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMY 219
+MN +G+SSDRFTYTY+LKACV SECL S LQKGKEIH HIL++GYGAHVHVMTTL+DMY
Sbjct: 418 QMNTVGISSDRFTYTYVLKACVVSECLSSLLQKGKEIHGHILKNGYGAHVHVMTTLLDMY 477
Query: 220 ARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVT 279
ARFGCV YAS+VFD+M ++NVVSWSAMIACYAKNG+PYEALELFREM+L D PN VT
Sbjct: 478 ARFGCVFYASSVFDQMQIRNVVSWSAMIACYAKNGRPYEALELFREMILEAQDLFPNPVT 537
Query: 280 MVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMH 339
MVSVLQACAA ALEQG+ IH YILRRGLDSILPV+SALITMYARCGKL+ G+ +F M+
Sbjct: 538 MVSVLQACAALTALEQGRFIHGYILRRGLDSILPVMSALITMYARCGKLDLGERVFSLMN 597
Query: 340 KKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKK 399
KKDVV WNSLISSYG+HGYG+KAI+IFE+MI+HG SPS ISF+SVLGACSH GLVEEGK
Sbjct: 598 KKDVVSWNSLISSYGIHGYGKKAIQIFEDMINHGVSPSRISFVSVLGACSHAGLVEEGKI 657
Query: 400 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIH 459
LF SMVKEHG+ PSVEHYACMVDLLGRANRLDEAAK+I+++RIEPG KVWG+LLG+CRIH
Sbjct: 658 LFNSMVKEHGLYPSVEHYACMVDLLGRANRLDEAAKVIDNMRIEPGAKVWGALLGSCRIH 717
Query: 460 CHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSW 519
C+VELAERAS+RLF+LEP NAGNYVLLADIYAEAE+WD+VKRVKK L++RELQKVPGRSW
Sbjct: 718 CNVELAERASRRLFELEPRNAGNYVLLADIYAEAELWDDVKRVKKHLEARELQKVPGRSW 777
Query: 520 IEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVL 579
IEV+RKIYSF SVDEFNPQ EQLHALL LS EMK +GY PQTK+VLYDLD+EEKERIVL
Sbjct: 778 IEVKRKIYSFISVDEFNPQMEQLHALLAELSAEMKDQGYKPQTKVVLYDLDEEEKERIVL 837
Query: 580 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFK 639
GHSEKLAVAFGLINT +G+TIRI+KNLRLCEDCHSVTKFISKFADREI+VRD+NRFHHF+
Sbjct: 838 GHSEKLAVAFGLINTKRGETIRISKNLRLCEDCHSVTKFISKFADREILVRDVNRFHHFR 897
Query: 640 DGVCSCGDYW 650
GVCSCGDYW
Sbjct: 898 GGVCSCGDYW 907
BLAST of Csa1G524740 vs. NCBI nr
Match:
gi|657950783|ref|XP_008349645.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Malus domestica])
HSP 1 Score: 1008.4 bits (2606), Expect = 5.5e-291
Identity = 484/610 (79.34%), Postives = 551/610 (90.33%), Query Frame = 1
Query: 40 NNNHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGG 99
+ N LIQSLCKQGNLKQAL L HE NP+QQT ELL+LS SLSD LDVH+ +VDGG
Sbjct: 258 DKNKLIQSLCKQGNLKQALQFLPHEPNPSQQTYELLLLSCTHHKSLSDGLDVHRHIVDGG 317
Query: 100 FDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYP 159
+DQDPFLATKLI M+S LD++DNAR+VFDKTRKRTIY+WNALFRAL LAG G +VL+LY
Sbjct: 318 WDQDPFLATKLIEMYSALDSIDNAREVFDKTRKRTIYMWNALFRALTLAGHGTEVLDLYR 377
Query: 160 RMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMY 219
+MN +G+SSDRFTYTY+LKACV SECL S LQKGKEIH HIL++GYGAHVHVMTTL+DMY
Sbjct: 378 QMNTVGISSDRFTYTYVLKACVVSECLSSLLQKGKEIHGHILKNGYGAHVHVMTTLLDMY 437
Query: 220 ARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVT 279
ARFGCV YAS+VFD+M ++NVVSWSAMIACYAKNG+PYEALELFREM+L+ D PN VT
Sbjct: 438 ARFGCVFYASSVFDQMQIRNVVSWSAMIACYAKNGRPYEALELFREMILDAQDLFPNPVT 497
Query: 280 MVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMH 339
MVSVLQACAA ALEQG+ IH YILRRGL+SILPV+SALITMYARCGKL+ G+ +F M+
Sbjct: 498 MVSVLQACAALTALEQGRFIHGYILRRGLBSILPVMSALITMYARCGKLDLGERVFSLMN 557
Query: 340 KKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKK 399
KKDVV WNSLISSYG+HG G+KAI+IFE+MI+HG SPS ISF+SVLGACSH GLVEEGK
Sbjct: 558 KKDVVSWNSLISSYGIHGNGKKAIQIFEDMINHGVSPSRISFVSVLGACSHAGLVEEGKI 617
Query: 400 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIH 459
LF SMVKEHG+ PSVEHYACMVDLLGRANRLDEAAK+I+++RIEPG KVWG+LLG+CRIH
Sbjct: 618 LFNSMVKEHGLYPSVEHYACMVDLLGRANRLDEAAKVIDNMRIEPGAKVWGALLGSCRIH 677
Query: 460 CHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSW 519
C+VELAERAS+RLF+LEP NAGNYVLLADIYAEA++WD+VKRVKK L++RELQK+PGRSW
Sbjct: 678 CNVELAERASRRLFELEPRNAGNYVLLADIYAEAKLWDDVKRVKKHLEARELQKIPGRSW 737
Query: 520 IEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVL 579
IEV+RKIYSF SVDEFNPQ EQLHALL LS EMK +GY PQTK+VLYDLD+EEKERIVL
Sbjct: 738 IEVKRKIYSFISVDEFNPQMEQLHALLAELSAEMKDQGYKPQTKVVLYDLDEEEKERIVL 797
Query: 580 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFK 639
GHSEKLAVAFGLINT +G+TIRI+KNLRLCEDCHSVTKFISKFA+REI+VRD+NRFHHF+
Sbjct: 798 GHSEKLAVAFGLINTKRGETIRISKNLRLCEDCHSVTKFISKFANREILVRDVNRFHHFR 857
Query: 640 DGVCSCGDYW 650
DGVCSCGDYW
Sbjct: 858 DGVCSCGDYW 867
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP265_ARATH | 3.3e-280 | 73.18 | Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop... | [more] |
| PP320_ARATH | 6.8e-132 | 42.04 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
| PP348_ARATH | 2.2e-130 | 38.75 | Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN... | [more] |
| PP224_ARATH | 1.9e-129 | 39.00 | Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN... | [more] |
| PP341_ARATH | 1.6e-128 | 40.78 | Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| F6GUX8_VITVI | 4.7e-289 | 75.84 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g05500 PE=4 SV=... | [more] |
| A0A061GWW5_THECC | 1.0e-288 | 75.58 | Tetratricopeptide repeat (TPR)-like superfamily protein OS=Theobroma cacao GN=TC... | [more] |
| V4S0Q9_9ROSI | 1.4e-288 | 76.84 | Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025096mg PE=4 SV=1 | [more] |
| A0A0D2RLL5_GOSRA | 6.8e-288 | 75.31 | Uncharacterized protein OS=Gossypium raimondii GN=B456_003G128500 PE=4 SV=1 | [more] |
| A0A067D6U3_CITSI | 8.8e-288 | 76.53 | Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g006076mg PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G46790.1 | 1.9e-281 | 73.18 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT4G18750.1 | 3.8e-133 | 42.04 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT4G33990.1 | 1.2e-131 | 38.75 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G12770.1 | 1.0e-130 | 39.00 | mitochondrial editing factor 22 | [more] |
| AT4G30700.1 | 8.8e-130 | 40.78 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
