Csa1G467730 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G467730
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 16812210 .. 16812617 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCGATCTATCTCAAGAAGAAAAAAAGTTGAATTATAAAATCAATGGCCGACACCGGGGCTTGGGACGGAACGGAGAAACCGATTGTAGTAATAATAAGAATGTGGGGATTGGGAAGAATGGTCAGCAGCGGCGATGAGGCGGCGATGGGTGCGGCGGAGGAGCTTAAGGTCGGTGAGAGTGGCGTGGCCTTTGTTGCTGGGAGAAGATGGCGGCGTTGGGGCTTTGGGGAGGGAGGGGAAGAAGAGGGAGTTGGAATAATGAAGTTTGTTTGTGGGTTGGGAATTAGTTGGGGAAATAATGGAAGATAGAAGAAGAAGAATTAGGAAGATGATGCAAAAAAATGGAGATTTTTTCTTGGTTGAGGAAGTCATTAGGAGAGGAAGTTTGAAGAAAATGAAAATTGGGA

mRNA sequence

ATGGCCGACACCGGGGCTTGGGACGGAACGGAGAAACCGATTGTAGTAATAATAAGAATGTGGGGATTGGGAAGAATGGTCAGCAGCGGCGATGAGGCGGCGATGGGTGCGGCGGAGGAGCTTAAGGTCGGTGAGAGTGGCGTGGCCTTTGTTGCTGGGAGAAGATGGCGGCGTTGGGGCTTTGGGGAGGGAGGGGAAGAAGAGGGAGTTGGAATAATGAAGTTTGTTTGTGGGTTGGGAATTAGTTGGGGAAATAATGGAAGATAG

Coding sequence (CDS)

ATGGCCGACACCGGGGCTTGGGACGGAACGGAGAAACCGATTGTAGTAATAATAAGAATGTGGGGATTGGGAAGAATGGTCAGCAGCGGCGATGAGGCGGCGATGGGTGCGGCGGAGGAGCTTAAGGTCGGTGAGAGTGGCGTGGCCTTTGTTGCTGGGAGAAGATGGCGGCGTTGGGGCTTTGGGGAGGGAGGGGAAGAAGAGGGAGTTGGAATAATGAAGTTTGTTTGTGGGTTGGGAATTAGTTGGGGAAATAATGGAAGATAG

Protein sequence

MADTGAWDGTEKPIVVIIRMWGLGRMVSSGDEAAMGAAEELKVGESGVAFVAGRRWRRWGFGEGGEEEGVGIMKFVCGLGISWGNNGR*
Homology
[Close]
BLAST of Csa1G467730 vs. TrEMBL
Match: A0A0A0LUK7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G467730 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 6.7e-45
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1 

Query: 1  MADTGAWDGTEKPIVVIIRMWGLGRMVSSGDEAAMGAAEELKVGESGVAFVAGRRWRRWG 60
          MADTGAWDGTEKPIVVIIRMWGLGRMVSSGDEAAMGAAEELKVGESGVAFVAGRRWRRWG
Sbjct: 1  MADTGAWDGTEKPIVVIIRMWGLGRMVSSGDEAAMGAAEELKVGESGVAFVAGRRWRRWG 60

Query: 61 FGEGGEEEGVGIMKFVCGLGISWGNNGR 89
          FGEGGEEEGVGIMKFVCGLGISWGNNGR
Sbjct: 61 FGEGGEEEGVGIMKFVCGLGISWGNNGR 88

[Close]
BLAST of Csa1G467730 vs. NCBI nr
Match: gi|700210509|gb|KGN65605.1| (hypothetical protein Csa_1G467730 [Cucumis sativus])

HSP 1 Score: 187.6 bits (475), Expect = 9.6e-45
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1 

Query: 1  MADTGAWDGTEKPIVVIIRMWGLGRMVSSGDEAAMGAAEELKVGESGVAFVAGRRWRRWG 60
          MADTGAWDGTEKPIVVIIRMWGLGRMVSSGDEAAMGAAEELKVGESGVAFVAGRRWRRWG
Sbjct: 1  MADTGAWDGTEKPIVVIIRMWGLGRMVSSGDEAAMGAAEELKVGESGVAFVAGRRWRRWG 60

Query: 61 FGEGGEEEGVGIMKFVCGLGISWGNNGR 89
          FGEGGEEEGVGIMKFVCGLGISWGNNGR
Sbjct: 61 FGEGGEEEGVGIMKFVCGLGISWGNNGR 88

The following BLAST results are available for this feature:
BLAST of Csa1G467730 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUK7_CUCSA6.7e-45100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G467730 PE=4 SV=1[more]
BLAST of Csa1G467730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700210509|gb|KGN65605.1|9.6e-45100.00hypothetical protein Csa_1G467730 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G467730.1Csa1G467730.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G467730CSPI01G21850Wild cucumber (PI 183967)cpicuB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G467730Watermelon (97103) v2cuwmbB012
Csa1G467730Watermelon (97103) v2cuwmbB031
Csa1G467730Watermelon (97103) v2cuwmbB033
Csa1G467730Wax gourdcuwgoB020
Csa1G467730Wax gourdcuwgoB029
Csa1G467730Cucumber (Chinese Long) v2cucuB038
Csa1G467730Cucumber (Chinese Long) v2cucuB048
Csa1G467730Cucumber (Gy14) v1cgycuB017
Csa1G467730Cucumber (Gy14) v1cgycuB315
Csa1G467730Cucurbita maxima (Rimu)cmacuB205
Csa1G467730Cucurbita maxima (Rimu)cmacuB398
Csa1G467730Cucurbita maxima (Rimu)cmacuB503
Csa1G467730Cucurbita maxima (Rimu)cmacuB650
Csa1G467730Cucurbita maxima (Rimu)cmacuB847
Csa1G467730Cucurbita moschata (Rifu)cmocuB190
Csa1G467730Cucurbita moschata (Rifu)cmocuB386
Csa1G467730Cucurbita moschata (Rifu)cmocuB638
Csa1G467730Cucurbita moschata (Rifu)cmocuB834
Csa1G467730Melon (DHL92) v3.5.1cumeB016
Csa1G467730Melon (DHL92) v3.5.1cumeB038
Csa1G467730Melon (DHL92) v3.5.1cumeB080
Csa1G467730Watermelon (Charleston Gray)cuwcgB025
Csa1G467730Watermelon (Charleston Gray)cuwcgB036
Csa1G467730Watermelon (97103) v1cuwmB009
Csa1G467730Watermelon (97103) v1cuwmB031
Csa1G467730Watermelon (97103) v1cuwmB052
Csa1G467730Cucurbita pepo (Zucchini)cpecuB019
Csa1G467730Cucurbita pepo (Zucchini)cpecuB054
Csa1G467730Cucurbita pepo (Zucchini)cpecuB475
Csa1G467730Cucurbita pepo (Zucchini)cpecuB514
Csa1G467730Bottle gourd (USVL1VR-Ls)culsiB004
Csa1G467730Bottle gourd (USVL1VR-Ls)culsiB017
Csa1G467730Bottle gourd (USVL1VR-Ls)culsiB031
Csa1G467730Cucumber (Gy14) v2cgybcuB002
Csa1G467730Cucumber (Gy14) v2cgybcuB242
Csa1G467730Melon (DHL92) v3.6.1cumedB011
Csa1G467730Melon (DHL92) v3.6.1cumedB075
Csa1G467730Silver-seed gourdcarcuB0162
Csa1G467730Silver-seed gourdcarcuB0576
Csa1G467730Silver-seed gourdcarcuB0815
Csa1G467730Silver-seed gourdcarcuB0971