Csa1G423080 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G423080
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 15388729 .. 15388953 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATACCTGCCGCGAATTAATCGAAAAGGGTTTCGGAGCAGGAATCGCCGACAAGGCCAGAGTCCTGAAAGCCCTAGAGAATATGAGGTATCAAGCAATGGGCGACGAGGAGGATGCCAGGTTGGCGCTCGTCCAATTTTGAGTATTGATTGCTTCGCCACTACAGTGCCACGTTGCACTTATTTAGGTACTGATTGGTTCTTAGGGAACGCAAAGTGCTGA

mRNA sequence

ATGAGATACCTGCCGCGAATTAATCGAAAAGGGTTTCGGAGCAGGAATCGCCGACAAGGCCAGAGTCCTGAAAGCCCTAGAGAATATGAGGTATCAAGCAATGGGCGACGAGGAGGATGCCAGGTTGGCGCTCGTCCAATTTTGAGTATTGATTGCTTCGCCACTACAGTGCCACGTTGCACTTATTTAGGTACTGATTGGTTCTTAGGGAACGCAAAGTGCTGA

Coding sequence (CDS)

ATGAGATACCTGCCGCGAATTAATCGAAAAGGGTTTCGGAGCAGGAATCGCCGACAAGGCCAGAGTCCTGAAAGCCCTAGAGAATATGAGGTATCAAGCAATGGGCGACGAGGAGGATGCCAGGTTGGCGCTCGTCCAATTTTGAGTATTGATTGCTTCGCCACTACAGTGCCACGTTGCACTTATTTAGGTACTGATTGGTTCTTAGGGAACGCAAAGTGCTGA

Protein sequence

MRYLPRINRKGFRSRNRRQGQSPESPREYEVSSNGRRGGCQVGARPILSIDCFATTVPRCTYLGTDWFLGNAKC*
Homology
[Close]
BLAST of Csa1G423080 vs. TrEMBL
Match: A0A0A0LU45_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G423080 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 5.6e-37
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1 

Query: 1  MRYLPRINRKGFRSRNRRQGQSPESPREYEVSSNGRRGGCQVGARPILSIDCFATTVPRC 60
          MRYLPRINRKGFRSRNRRQGQSPESPREYEVSSNGRRGGCQVGARPILSIDCFATTVPRC
Sbjct: 1  MRYLPRINRKGFRSRNRRQGQSPESPREYEVSSNGRRGGCQVGARPILSIDCFATTVPRC 60

Query: 61 TYLGTDWFLGNAKC 75
          TYLGTDWFLGNAKC
Sbjct: 61 TYLGTDWFLGNAKC 74

[Close]
BLAST of Csa1G423080 vs. NCBI nr
Match: gi|700210354|gb|KGN65450.1| (hypothetical protein Csa_1G423080 [Cucumis sativus])

HSP 1 Score: 161.0 bits (406), Expect = 8.1e-37
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1 

Query: 1  MRYLPRINRKGFRSRNRRQGQSPESPREYEVSSNGRRGGCQVGARPILSIDCFATTVPRC 60
          MRYLPRINRKGFRSRNRRQGQSPESPREYEVSSNGRRGGCQVGARPILSIDCFATTVPRC
Sbjct: 1  MRYLPRINRKGFRSRNRRQGQSPESPREYEVSSNGRRGGCQVGARPILSIDCFATTVPRC 60

Query: 61 TYLGTDWFLGNAKC 75
          TYLGTDWFLGNAKC
Sbjct: 61 TYLGTDWFLGNAKC 74

The following BLAST results are available for this feature:
BLAST of Csa1G423080 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LU45_CUCSA5.6e-37100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G423080 PE=4 SV=1[more]
BLAST of Csa1G423080 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700210354|gb|KGN65450.1|8.1e-37100.00hypothetical protein Csa_1G423080 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G423080.1Csa1G423080.1mRNA