Csa1G399660 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G399660
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 14779383 .. 14779571 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATCTGATAGAAATCTCCATTATCGAGAGGGGATTGTTTTGACCCGCCAAATGGATGGCTCCTCCACGTGGCCTCTCTTCCTCTCTTCAGAAGATGAAGCTGGTTTTCTACGCTTCCTTTCCTCTTTGGATTTTCTTTCGCTTCTGCCCATTCCAAAATTGAACGAAGATCGTAAAATTTGGTGA

mRNA sequence

ATGGAATCTGATAGAAATCTCCATTATCGAGAGGGGATTGTTTTGACCCGCCAAATGGATGGCTCCTCCACGTGGCCTCTCTTCCTCTCTTCAGAAGATGAAGCTGGTTTTCTACGCTTCCTTTCCTCTTTGGATTTTCTTTCGCTTCTGCCCATTCCAAAATTGAACGAAGATCGTAAAATTTGGTGA

Coding sequence (CDS)

ATGGAATCTGATAGAAATCTCCATTATCGAGAGGGGATTGTTTTGACCCGCCAAATGGATGGCTCCTCCACGTGGCCTCTCTTCCTCTCTTCAGAAGATGAAGCTGGTTTTCTACGCTTCCTTTCCTCTTTGGATTTTCTTTCGCTTCTGCCCATTCCAAAATTGAACGAAGATCGTAAAATTTGGTGA

Protein sequence

MESDRNLHYREGIVLTRQMDGSSTWPLFLSSEDEAGFLRFLSSLDFLSLLPIPKLNEDRKIW*
Homology
[Close]
BLAST of Csa1G399660 vs. TrEMBL
Match: A0A0A0LWM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G399660 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.0e-27
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MESDRNLHYREGIVLTRQMDGSSTWPLFLSSEDEAGFLRFLSSLDFLSLLPIPKLNEDRK 60
          MESDRNLHYREGIVLTRQMDGSSTWPLFLSSEDEAGFLRFLSSLDFLSLLPIPKLNEDRK
Sbjct: 1  MESDRNLHYREGIVLTRQMDGSSTWPLFLSSEDEAGFLRFLSSLDFLSLLPIPKLNEDRK 60

Query: 61 IW 63
          IW
Sbjct: 61 IW 62

[Close]
BLAST of Csa1G399660 vs. NCBI nr
Match: gi|700210293|gb|KGN65389.1| (hypothetical protein Csa_1G399660 [Cucumis sativus])

HSP 1 Score: 129.0 bits (323), Expect = 2.9e-27
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MESDRNLHYREGIVLTRQMDGSSTWPLFLSSEDEAGFLRFLSSLDFLSLLPIPKLNEDRK 60
          MESDRNLHYREGIVLTRQMDGSSTWPLFLSSEDEAGFLRFLSSLDFLSLLPIPKLNEDRK
Sbjct: 1  MESDRNLHYREGIVLTRQMDGSSTWPLFLSSEDEAGFLRFLSSLDFLSLLPIPKLNEDRK 60

Query: 61 IW 63
          IW
Sbjct: 61 IW 62

The following BLAST results are available for this feature:
BLAST of Csa1G399660 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWM8_CUCSA2.0e-27100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G399660 PE=4 SV=1[more]
BLAST of Csa1G399660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700210293|gb|KGN65389.1|2.9e-27100.00hypothetical protein Csa_1G399660 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G399660.1Csa1G399660.1mRNA