Csa1G373010 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G373010
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 14385884 .. 14386203 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGCAGATAGCAGTGGTGTTCGGCGATGTTCAGATGGTAGCAAGTAGCAGCGGCGTTAGAATGGTGGGTTGCGAGAAGAGGAAGAGAGAAATGGGGAGGGTAGCGGCGTCGTTTGGATGGTGGGTTGCGAGAAGTGGAAGAGGGAAATCAAAAGGGTAGCAGCGACGTTCAGATGGTAGGTTGTGAGAAGAGGAAGAGGGAAATCAGAAGGGTAGCGGTTGAGTTGCGTTCTGTGGGAAGAGGAAGAGGCAAATTGAGGGGAAGTGTTGTATGGGAGAGAGAAAGGTGGGAGGGAAATGTTGGAGGGAAAAAGTAA

mRNA sequence

ATGGTAGCAGATAGCAGTGGTGTTCGGCGATGTTCAGATGAAGTGGAAGAGGGAAATCAAAAGGGTAGCAGCGACGTTCAGATGGTAGGTTGTGAGAAGAGGAAGAGGGAAATCAGAAGGGTAGCGGTTGAGTTGCGTTCTGTGGGAAGAGGAAGAGGCAAATTGAGGGGAAGTGTTGTATGGGAGAGAGAAAGGTGGGAGGGAAATGTTGGAGGGAAAAAGTAA

Coding sequence (CDS)

ATGGTAGCAGATAGCAGTGGTGTTCGGCGATGTTCAGATGAAGTGGAAGAGGGAAATCAAAAGGGTAGCAGCGACGTTCAGATGGTAGGTTGTGAGAAGAGGAAGAGGGAAATCAGAAGGGTAGCGGTTGAGTTGCGTTCTGTGGGAAGAGGAAGAGGCAAATTGAGGGGAAGTGTTGTATGGGAGAGAGAAAGGTGGGAGGGAAATGTTGGAGGGAAAAAGTAA

Protein sequence

MVADSSGVRRCSDEVEEGNQKGSSDVQMVGCEKRKREIRRVAVELRSVGRGRGKLRGSVVWERERWEGNVGGKK*
Homology
[Close]
BLAST of Csa1G373010 vs. TrEMBL
Match: A0A0A0LWJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G373010 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.6e-34
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1 

Query: 1  MVADSSGVRRCSDEVEEGNQKGSSDVQMVGCEKRKREIRRVAVELRSVGRGRGKLRGSVV 60
          MVADSSGVRRCSDEVEEGNQKGSSDVQMVGCEKRKREIRRVAVELRSVGRGRGKLRGSVV
Sbjct: 1  MVADSSGVRRCSDEVEEGNQKGSSDVQMVGCEKRKREIRRVAVELRSVGRGRGKLRGSVV 60

Query: 61 WERERWEGNVGGKK 75
          WERERWEGNVGGKK
Sbjct: 61 WERERWEGNVGGKK 74

[Close]
BLAST of Csa1G373010 vs. NCBI nr
Match: gi|700210263|gb|KGN65359.1| (hypothetical protein Csa_1G373010 [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 3.8e-34
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1 

Query: 1  MVADSSGVRRCSDEVEEGNQKGSSDVQMVGCEKRKREIRRVAVELRSVGRGRGKLRGSVV 60
          MVADSSGVRRCSDEVEEGNQKGSSDVQMVGCEKRKREIRRVAVELRSVGRGRGKLRGSVV
Sbjct: 1  MVADSSGVRRCSDEVEEGNQKGSSDVQMVGCEKRKREIRRVAVELRSVGRGRGKLRGSVV 60

Query: 61 WERERWEGNVGGKK 75
          WERERWEGNVGGKK
Sbjct: 61 WERERWEGNVGGKK 74

The following BLAST results are available for this feature:
BLAST of Csa1G373010 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWJ5_CUCSA2.6e-34100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G373010 PE=4 SV=1[more]
BLAST of Csa1G373010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700210263|gb|KGN65359.1|3.8e-34100.00hypothetical protein Csa_1G373010 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G373010.1Csa1G373010.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G373010Watermelon (97103) v1cuwmB084
Csa1G373010Cucurbita pepo (Zucchini)cpecuB355
Csa1G373010Cucurbita pepo (Zucchini)cpecuB640
Csa1G373010Bottle gourd (USVL1VR-Ls)culsiB062
Csa1G373010Cucumber (Gy14) v2cgybcuB002
Csa1G373010Melon (DHL92) v3.6.1cumedB050
Csa1G373010Silver-seed gourdcarcuB0039
Csa1G373010Silver-seed gourdcarcuB0134
Csa1G373010Silver-seed gourdcarcuB0596
Csa1G373010Watermelon (97103) v2cuwmbB069
Csa1G373010Wax gourdcuwgoB004
Csa1G373010Wax gourdcuwgoB098
Csa1G373010Cucumber (Gy14) v1cgycuB149
Csa1G373010Cucumber (Gy14) v1cgycuB333
Csa1G373010Cucurbita maxima (Rimu)cmacuB063
Csa1G373010Cucurbita maxima (Rimu)cmacuB103
Csa1G373010Cucurbita maxima (Rimu)cmacuB783
Csa1G373010Cucurbita moschata (Rifu)cmocuB053
Csa1G373010Cucurbita moschata (Rifu)cmocuB090
Csa1G373010Melon (DHL92) v3.5.1cumeB003
Csa1G373010Watermelon (Charleston Gray)cuwcgB071