Csa1G368490 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G368490
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 14275772 .. 14275927 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGATACGGCTATTGAGGAAGTTGGCATTTTGAAGACACCTGCTACAAAACCAGTCGAAGTATCCTTACATCCCTCTGCTCTTCTCGAGGAGATTCGCCTGGGTAAGATGAAAGTAGGTGGCAAAGATATCAAGAATCCTCCCTCTAGATGA

mRNA sequence

ATGGCTGATACGGCTATTGAGGAAGTTGGCATTTTGAAGACACCTGCTACAAAACCAGTCGAAGTATCCTTACATCCCTCTGCTCTTCTCGAGGAGATTCGCCTGGGTAAGATGAAAGTAGGTGGCAAAGATATCAAGAATCCTCCCTCTAGATGA

Coding sequence (CDS)

ATGGCTGATACGGCTATTGAGGAAGTTGGCATTTTGAAGACACCTGCTACAAAACCAGTCGAAGTATCCTTACATCCCTCTGCTCTTCTCGAGGAGATTCGCCTGGGTAAGATGAAAGTAGGTGGCAAAGATATCAAGAATCCTCCCTCTAGATGA

Protein sequence

MADTAIEEVGILKTPATKPVEVSLHPSALLEEIRLGKMKVGGKDIKNPPSR*
Homology
[Close]
BLAST of Csa1G368490 vs. TrEMBL
Match: A0A0A0LU69_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G368490 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.3e-19
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 1 

Query: 1  MADTAIEEVGILKTPATKPVEVSLHPSALLEEIRLGKMKVGGKDIKNPPSR 52
          MADTAIEEVGILKTPATKPVEVSLHPSALLEEIRLGKMKVGGKDIKNPPSR
Sbjct: 1  MADTAIEEVGILKTPATKPVEVSLHPSALLEEIRLGKMKVGGKDIKNPPSR 51

[Close]
BLAST of Csa1G368490 vs. TrEMBL
Match: A0A0A0L2B5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G444640 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 5.5e-15
Identity = 45/51 (88.24%), Postives = 45/51 (88.24%), Query Frame = 1 

Query: 1  MADTAIEEVGILKTPATKPVEVSLHPSALLEEIRLGKMKVGGKDIKNPPSR 52
          MADT IEEV ILKTPA K VEVSL PSALLEEIR GKMKVGGKDIKNPPSR
Sbjct: 14 MADTTIEEVCILKTPAAKSVEVSLRPSALLEEIRQGKMKVGGKDIKNPPSR 64

[Close]
BLAST of Csa1G368490 vs. TrEMBL
Match: A0A0A0KYX3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G083520 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.1e-10
Identity = 37/51 (72.55%), Postives = 42/51 (82.35%), Query Frame = 1 

Query: 1  MADTAIEEVGILKTPATKPVEVSLHPSALLEEIRLGKMKVGGKDIKNPPSR 52
          M DTAIE++GILKTP  KPVE+SL  SALLEEIR  KMKV GKDI+NP S+
Sbjct: 1  MVDTAIEKIGILKTPPVKPVELSLCSSALLEEIRRAKMKVDGKDIENPLSK 51

[Close]
BLAST of Csa1G368490 vs. TrEMBL
Match: A0A0A0KQU9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G264300 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 7.7e-09
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 1 

Query: 13 KTPATKPVEVSLHPSALLEEIRLGKMKVGGKDIKNPPSR 52
          KTPA KPV+VSL PSALLEEIR GKMKVGGKDI+N PSR
Sbjct: 33 KTPAAKPVKVSLRPSALLEEIRRGKMKVGGKDIENLPSR 71

[Close]
BLAST of Csa1G368490 vs. TrEMBL
Match: E5GCB9_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.4e-07
Identity = 31/51 (60.78%), Postives = 37/51 (72.55%), Query Frame = 1 

Query: 1   MADTAIEEVGILKTPATKPVEVSLHPSALLEEIRLGKMKVGGKDIKNPPSR 52
           + D+A EEVG  KTP  KP E SL PSAL EEIR GKM VGGKD+++  S+
Sbjct: 402 VVDSAFEEVGTSKTPVNKPAEQSLCPSALFEEIRRGKMTVGGKDLESHSSK 452

[Close]
BLAST of Csa1G368490 vs. NCBI nr
Match: gi|700210257|gb|KGN65353.1| (hypothetical protein Csa_1G368490 [Cucumis sativus])

HSP 1 Score: 102.8 bits (255), Expect = 1.8e-19
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 1 

Query: 1  MADTAIEEVGILKTPATKPVEVSLHPSALLEEIRLGKMKVGGKDIKNPPSR 52
          MADTAIEEVGILKTPATKPVEVSLHPSALLEEIRLGKMKVGGKDIKNPPSR
Sbjct: 1  MADTAIEEVGILKTPATKPVEVSLHPSALLEEIRLGKMKVGGKDIKNPPSR 51

[Close]
BLAST of Csa1G368490 vs. NCBI nr
Match: gi|700199594|gb|KGN54752.1| (hypothetical protein Csa_4G444640 [Cucumis sativus])

HSP 1 Score: 87.4 bits (215), Expect = 7.9e-15
Identity = 45/51 (88.24%), Postives = 45/51 (88.24%), Query Frame = 1 

Query: 1  MADTAIEEVGILKTPATKPVEVSLHPSALLEEIRLGKMKVGGKDIKNPPSR 52
          MADT IEEV ILKTPA K VEVSL PSALLEEIR GKMKVGGKDIKNPPSR
Sbjct: 14 MADTTIEEVCILKTPAAKSVEVSLRPSALLEEIRQGKMKVGGKDIKNPPSR 64

[Close]
BLAST of Csa1G368490 vs. NCBI nr
Match: gi|700198419|gb|KGN53577.1| (hypothetical protein Csa_4G083520 [Cucumis sativus])

HSP 1 Score: 73.2 bits (178), Expect = 1.5e-10
Identity = 37/51 (72.55%), Postives = 42/51 (82.35%), Query Frame = 1 

Query: 1  MADTAIEEVGILKTPATKPVEVSLHPSALLEEIRLGKMKVGGKDIKNPPSR 52
          M DTAIE++GILKTP  KPVE+SL  SALLEEIR  KMKV GKDI+NP S+
Sbjct: 1  MVDTAIEKIGILKTPPVKPVELSLCSSALLEEIRRAKMKVDGKDIENPLSK 51

[Close]
BLAST of Csa1G368490 vs. NCBI nr
Match: gi|700195620|gb|KGN50797.1| (hypothetical protein Csa_5G264300 [Cucumis sativus])

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-08
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 1 

Query: 13 KTPATKPVEVSLHPSALLEEIRLGKMKVGGKDIKNPPSR 52
          KTPA KPV+VSL PSALLEEIR GKMKVGGKDI+N PSR
Sbjct: 33 KTPAAKPVKVSLRPSALLEEIRRGKMKVGGKDIENLPSR 71

[Close]
BLAST of Csa1G368490 vs. NCBI nr
Match: gi|307136292|gb|ADN34118.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 62.8 bits (151), Expect = 2.1e-07
Identity = 31/51 (60.78%), Postives = 37/51 (72.55%), Query Frame = 1 

Query: 1   MADTAIEEVGILKTPATKPVEVSLHPSALLEEIRLGKMKVGGKDIKNPPSR 52
           + D+A EEVG  KTP  KP E SL PSAL EEIR GKM VGGKD+++  S+
Sbjct: 402 VVDSAFEEVGTSKTPVNKPAEQSLCPSALFEEIRRGKMTVGGKDLESHSSK 452

The following BLAST results are available for this feature:
BLAST of Csa1G368490 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LU69_CUCSA1.3e-19100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G368490 PE=4 SV=1[more]
A0A0A0L2B5_CUCSA5.5e-1588.24Uncharacterized protein OS=Cucumis sativus GN=Csa_4G444640 PE=4 SV=1[more]
A0A0A0KYX3_CUCSA1.1e-1072.55Uncharacterized protein OS=Cucumis sativus GN=Csa_4G083520 PE=4 SV=1[more]
A0A0A0KQU9_CUCSA7.7e-0984.62Uncharacterized protein OS=Cucumis sativus GN=Csa_5G264300 PE=4 SV=1[more]
E5GCB9_CUCME1.4e-0760.78Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
BLAST of Csa1G368490 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700210257|gb|KGN65353.1|1.8e-19100.00hypothetical protein Csa_1G368490 [Cucumis sativus][more]
gi|700199594|gb|KGN54752.1|7.9e-1588.24hypothetical protein Csa_4G444640 [Cucumis sativus][more]
gi|700198419|gb|KGN53577.1|1.5e-1072.55hypothetical protein Csa_4G083520 [Cucumis sativus][more]
gi|700195620|gb|KGN50797.1|1.1e-0884.62hypothetical protein Csa_5G264300 [Cucumis sativus][more]
gi|307136292|gb|ADN34118.1|2.1e-0760.78hypothetical protein [Cucumis melo subsp. melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G368490.1Csa1G368490.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G368490Cucurbita pepo (Zucchini)cpecuB355
Csa1G368490Cucurbita pepo (Zucchini)cpecuB640
Csa1G368490Bottle gourd (USVL1VR-Ls)culsiB062
Csa1G368490Cucumber (Gy14) v2cgybcuB002
Csa1G368490Melon (DHL92) v3.6.1cumedB050
Csa1G368490Silver-seed gourdcarcuB0039
Csa1G368490Silver-seed gourdcarcuB0134
Csa1G368490Silver-seed gourdcarcuB0596
Csa1G368490Watermelon (97103) v2cuwmbB083
Csa1G368490Wax gourdcuwgoB004
Csa1G368490Wax gourdcuwgoB098
Csa1G368490Cucumber (Gy14) v1cgycuB149
Csa1G368490Cucumber (Gy14) v1cgycuB333
Csa1G368490Cucurbita maxima (Rimu)cmacuB063
Csa1G368490Cucurbita maxima (Rimu)cmacuB103
Csa1G368490Cucurbita maxima (Rimu)cmacuB783
Csa1G368490Cucurbita moschata (Rifu)cmocuB053
Csa1G368490Cucurbita moschata (Rifu)cmocuB090
Csa1G368490Melon (DHL92) v3.5.1cumeB003
Csa1G368490Watermelon (97103) v1cuwmB098