Csa1G348440 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G348440
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Blue copper protein, putative; contains IPR008972 (Cupredoxin)
Location	Chr1 : 14013708 .. 14015380 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATCATCATTAAAATAAGAAAAATGGCTACAAAACTAATGAGTTTAAGTTCAATTGCCTGTCTTCTCCTTGTTGGGGCTTTCCTCCATGTTGCCTCCGCTGTCGACTATGATGTTGGTGGTGATTTCGGCTGGAGCCTACCACCGAACCCCACCTTCTTCTCTGATTGGGCTCGTAATAAAACTTTCTTTGTGGGTGATAAACTAGGTTAGTGATTCATTATATGCCCTTACTCATACTCCATTTTTGTTCGTTAAATTACACATTTAAATTAACTTTTAATTTCAAATTTAGTAAGTTAATTTTATGTTGTGGTAAAATTTTATAATCGCTCTATAGTACTATTAGGTTACTTATTTAACCTTTGTTTTTCTTTTGTTAAATATGATACAAAATTATATGCCCATTAACTTTGGGGGTATGTTTCCATGATTCTATTATTTGATGTTAAAAAGTTTCAATTTGACTAAAATCAACTTTTAAATGTGTTCTAAACAAATACCTTTGAAAAACTCCATCATTAAAATAAGATGTAAATGGGTGCCGTAACTAATTGTAACATCATTTAACTGGTATAAAATGATTCACTTAAATTAACTTGATAATCGTATACTAAATGTGTTTTAATTTATTGAGATGAAATAAATGATAACAATGTAATTTTAATCTTGTATAATACATAGGATTGTTTTCAAATAGAGCAAAATAAACAAACTATCATTGATAAATGTTGATTAACGTACATCGATAGGATTATTAATTATCATCATCTATCACTCAAATATGTGTTTATCAATATCTAAAATTATCTATCAGGATAATATCACATAGTTTTACACATCAATTCTCATACTTTAATTTTCTTGAAAAAACTTAAATTTGAAAAGTTAAAAATAAAACTTTATGAAGTATTGGTTATACACAATAGTTAAAACCCATAACAATTTAGATTGTGTTAGGACATATTGACCCTCTAAATATTTTTAAACACTTATTTTACATCTATAAATACTTTTTTTGAAGCATTAAAAATTGAATCCGTACACTTATTTTACATCTATAAATACCTTTTTTGAAGCATTAAAAATTCAATCCAAACATACGGATAGTCCCTAAATTTTGAATAAGTAATTCAACTTGGTTAGTATATATTTTGAAAGTCTCTCTAAAATTTAGATTCCAATATTTTTGATAATTTATTTAAAAAATTATTTCTATTTAACTTGTTCATTGTAAAAAGATTTTTTAAACTTGACCAATTTTTTTTTTAATAATATCTAAATTGTTACAAATCATATAATACATGAACAAGTATTTACCAACGAAAATAAGAGAACTATAAATTGTTTTTGTGTGCAGTGTTCCGATCAAAAGCGTCAGAGACCCATGATGTGGCAGAGCCTGATGGGCAAGTAGATTTGGATGGATGTGTGGAGCCAGGAATTAGTTTAAGTACATCTGCTGTGTTATCTATTTCACTTGATTCTCCACGTCGCCGTTACTTTATTTGTACTATTGGGAATCATTGTAATGCGGGTATGAAATTTGCTGTCGACGTTTTTATAAACCCCAACTCTGCCATGCCGCCACCGCCCAGCTCTGCCTCTTCCTTAAGATTTGGTGCAGTTTTGGCTGCAGCCATGGCTGGATTGTTCTTTCTTTTAACCATATGA

mRNA sequence

ATGGCTACAAAACTAATGAGTTTAAGTTCAATTGCCTGTCTTCTCCTTGTTGGGGCTTTCCTCCATGTTGCCTCCGCTGTCGACTATGATGTTGGTGGTGATTTCGGCTGGAGCCTACCACCGAACCCCACCTTCTTCTCTGATTGGGCTCGTAATAAAACTTTCTTTGTGGGTGATAAACTAGTGTTCCGATCAAAAGCGTCAGAGACCCATGATGTGGCAGAGCCTGATGGGCAAGTAGATTTGGATGGATGTGTGGAGCCAGGAATTAGTTTAAGTACATCTGCTGTGTTATCTATTTCACTTGATTCTCCACGTCGCCGTTACTTTATTTGTACTATTGGGAATCATTGTAATGCGGGTATGAAATTTGCTGTCGACGTTTTTATAAACCCCAACTCTGCCATGCCGCCACCGCCCAGCTCTGCCTCTTCCTTAAGATTTGGTGCAGTTTTGGCTGCAGCCATGGCTGGATTGTTCTTTCTTTTAACCATATGA

Coding sequence (CDS)

ATGGCTACAAAACTAATGAGTTTAAGTTCAATTGCCTGTCTTCTCCTTGTTGGGGCTTTCCTCCATGTTGCCTCCGCTGTCGACTATGATGTTGGTGGTGATTTCGGCTGGAGCCTACCACCGAACCCCACCTTCTTCTCTGATTGGGCTCGTAATAAAACTTTCTTTGTGGGTGATAAACTAGTGTTCCGATCAAAAGCGTCAGAGACCCATGATGTGGCAGAGCCTGATGGGCAAGTAGATTTGGATGGATGTGTGGAGCCAGGAATTAGTTTAAGTACATCTGCTGTGTTATCTATTTCACTTGATTCTCCACGTCGCCGTTACTTTATTTGTACTATTGGGAATCATTGTAATGCGGGTATGAAATTTGCTGTCGACGTTTTTATAAACCCCAACTCTGCCATGCCGCCACCGCCCAGCTCTGCCTCTTCCTTAAGATTTGGTGCAGTTTTGGCTGCAGCCATGGCTGGATTGTTCTTTCTTTTAACCATATGA

Protein sequence

MATKLMSLSSIACLLLVGAFLHVASAVDYDVGGDFGWSLPPNPTFFSDWARNKTFFVGDKLVFRSKASETHDVAEPDGQVDLDGCVEPGISLSTSAVLSISLDSPRRRYFICTIGNHCNAGMKFAVDVFINPNSAMPPPPSSASSLRFGAVLAAAMAGLFFLLTI*

Homology

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BLAST of Csa1G348440 vs. Swiss-Prot
Match: CPC_CUCSA (Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3)

HSP 1 Score: 85.9 bits (211), Expect = 4.6e-16
Identity = 46/118 (38.98%), Postives = 63/118 (53.39%), Query Frame = 1


Query: 31  VGGDFGWSLPPNPTFFSDWARNKTFFVGDKLVFRSKASETHDVAEPDGQVDLDGC--VEP 90
           VG + GWS+P +P F+S WA  KTF VGD L F   A+  H+V E + +   D C  V  
Sbjct: 7   VGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPAN-AHNVHEMETKQSFDACNFVNS 66

Query: 91  GISLSTSAVLSISLDSPRRRYFICTIGNHCNAGMKFAVDVF-INPNSAMPPPPSSASS 146
              +  ++ +   LD     YF+CT+G HC+ G K +++V   N   +MPPP SS  S
Sbjct: 67  DNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINVVAANATVSMPPPSSSPPS 123

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BLAST of Csa1G348440 vs. Swiss-Prot
Match: BCB1_ARATH (Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2)

HSP 1 Score: 82.4 bits (202), Expect = 5.1e-15
Identity = 54/144 (37.50%), Postives = 72/144 (50.00%), Query Frame = 1


Query: 10  SIACLLLVGAFLHVASAVDYDVGGDFGWSLPPNPTFFSDWARNKTFFVGDKLVFRSKASE 69
           ++  L+LV A + V  A DYDVG D  W+ P +P F++ WA  KTF VGD+L F   A  
Sbjct: 7   TVTFLVLVFAAV-VVFAEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGR 66

Query: 70  THDVAEPDGQVDLDGCV-EPGISLSTSAVLSISLDSPRRRYFICTIGNHCNAGMKFAVDV 129
            HDVA    +   + C  E  IS  T   + I L++   +YFICT+G+HC  G K ++ V
Sbjct: 67  -HDVAVVS-EAAFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITV 126

Query: 130 F-------INPNSAMPPPPSSASS 146
                     P +   P P S  S
Sbjct: 127 VAAGATGGATPGAGATPAPGSTPS 147

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BLAST of Csa1G348440 vs. Swiss-Prot
Match: UMEC_ARMRU (Umecyanin OS=Armoracia rusticana PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-14
Identity = 44/102 (43.14%), Postives = 57/102 (55.88%), Query Frame = 1


Query: 28  DYDVGGDFGWSLPPNPTFFSDWARNKTFFVGDKLVFRSKASETHDVAEPDGQVDLDGCV- 87
           DYDVGGD  W  P +P F+  WA  KTF VGD+L F   A+  HDVA        D C  
Sbjct: 2   DYDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEF-DFAAGMHDVAVVTKDA-FDNCKK 61

Query: 88  EPGISLSTSAVLSISLDSPRRRYFICTIGNHCNAGMKFAVDV 129
           E  IS  T+  + I L++   +Y+ICT+G+HC  G K +++V
Sbjct: 62  ENPISHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINV 101

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BLAST of Csa1G348440 vs. Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.4e-09
Identity = 46/144 (31.94%), Postives = 66/144 (45.83%), Query Frame = 1


Query: 6   MSLSSIACLLLVGAFLHVAS---AVDYDVGGDFGWSLPPNPTFFSDWARNKTFFVGDKLV 65
           M+ S+   L  + A +++A    A  Y VG   GW +  +   +S WA +KTF VGD LV
Sbjct: 1   MAFSNALVLCFLLAIINMALPSLATVYTVGDTSGWVIGGD---YSTWASDKTFAVGDSLV 60

Query: 66  FRSKASETHDVAEPDGQVDLDGCVEPG-ISLSTSAVLSISLDSPRRRYFICTIGNHCNAG 125
           F   A   H V E   + D   C     IS  ++   +I L    + YFIC +  H   G
Sbjct: 61  FNYGAG-AHTVDEVK-ESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGG 120

Query: 126 MKFAVDVFINPNSAMPPPPSSASS 146
           MK ++ V  +  S+  P  + +SS
Sbjct: 121 MKLSIKVKASSGSSAAPSATPSSS 139

[Close]

BLAST of Csa1G348440 vs. Swiss-Prot
Match: ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 3.9e-07
Identity = 44/153 (28.76%), Postives = 69/153 (45.10%), Query Frame = 1


Query: 6   MSLSSIACLLLVGAFLH-VASAVDYDVGGDFG-WSLPPNPTF-FSDWARNKTFFVGDKLV 65
           M+ SS+   +    FL  +A+A +  VGG  G W +PP+ ++ F++WA+   F VGD +V
Sbjct: 7   MASSSLHVAIFSLIFLFSLAAANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIV 66

Query: 66  FRSKASETHDVAEPDGQVDLDGCVEPGISLSTSAVLSISLDSPRRRYFICTIGNHCNAGM 125
           FR ++ +   +       +      P ++  T     + LD     YFI     HC  G 
Sbjct: 67  FRYESGKDSVLEVTKEAYNSCNTTNP-LANYTDGETKVKLDRSGPFYFISGANGHCEKGQ 126

Query: 126 KFAVDVFINPNSAMPPPPSSASSLRFGAVLAAA 156
           K ++ V I+P  ++  P  S      G  LA A
Sbjct: 127 KLSL-VVISPRHSVISPAPSPVEFEDGPALAPA 157

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BLAST of Csa1G348440 vs. TrEMBL
Match: A0A0A0LWH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G348440 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 8.2e-89
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1


Query: 1   MATKLMSLSSIACLLLVGAFLHVASAVDYDVGGDFGWSLPPNPTFFSDWARNKTFFVGDK 60
           MATKLMSLSSIACLLLVGAFLHVASAVDYDVGGDFGWSLPPNPTFFSDWARNKTFFVGDK
Sbjct: 1   MATKLMSLSSIACLLLVGAFLHVASAVDYDVGGDFGWSLPPNPTFFSDWARNKTFFVGDK 60

Query: 61  LVFRSKASETHDVAEPDGQVDLDGCVEPGISLSTSAVLSISLDSPRRRYFICTIGNHCNA 120
           LVFRSKASETHDVAEPDGQVDLDGCVEPGISLSTSAVLSISLDSPRRRYFICTIGNHCNA
Sbjct: 61  LVFRSKASETHDVAEPDGQVDLDGCVEPGISLSTSAVLSISLDSPRRRYFICTIGNHCNA 120

Query: 121 GMKFAVDVFINPNSAMPPPPSSASSLRFGAVLAAAMAGLFFLLTI 166
           GMKFAVDVFINPNSAMPPPPSSASSLRFGAVLAAAMAGLFFLLTI
Sbjct: 121 GMKFAVDVFINPNSAMPPPPSSASSLRFGAVLAAAMAGLFFLLTI 165

[Close]

BLAST of Csa1G348440 vs. TrEMBL
Match: A0A0A0LTT8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G348940 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 3.4e-66
Identity = 128/164 (78.05%), Postives = 139/164 (84.76%), Query Frame = 1


Query: 1   MATKLMSLSSIACLLLVGAFLHVASAVDYDVGGDFGWSLPPNPTFFSDWARNKTFFVGDK 60
           MATKLMS SSIAC+ LVGA L V    DYDVGGDFGW++PP PTFFSDW  NKTFFVGDK
Sbjct: 1   MATKLMSWSSIACVFLVGALLQVVYGFDYDVGGDFGWNVPPIPTFFSDWTHNKTFFVGDK 60

Query: 61  LVFRSKASETHDVAEPDGQVDLDGCVEPGISLST-SAVLSISLDSPRRRYFICTIGNHCN 120
           LVF+S +SE HDVAEP+ Q D DGCV+PGISLST SA+LS+ LDSPRRRYFICTIGNHCN
Sbjct: 61  LVFQSNSSEFHDVAEPESQTDFDGCVKPGISLSTSSAMLSVLLDSPRRRYFICTIGNHCN 120

Query: 121 AGMKFAVDVFINPNSAM----PPPPSSASSLRFGAVLAAAMAGL 160
           AGMKF VDVF+NPNSA+    PPPPSSASSLRFGAV AAAM GL
Sbjct: 121 AGMKFTVDVFVNPNSALLPPPPPPPSSASSLRFGAVSAAAMTGL 164

[Close]

BLAST of Csa1G348440 vs. TrEMBL
Match: A0A0A0LZE7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G348950 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.0e-35
Identity = 75/131 (57.25%), Postives = 92/131 (70.23%), Query Frame = 1


Query: 11  IACLLLVGAFLHVASAVDYDVGGDFGWSLPPNPTFFSDWARNKTFFVGDKLVFRSKASET 70
           +A  L +   L   +AVDY VGGDFGW+LPP PTFFS+WA NKTFFVGD+L F S A+ET
Sbjct: 10  LASFLFIAVLLPAVAAVDYQVGGDFGWNLPPTPTFFSEWASNKTFFVGDRLRFNSSANET 69

Query: 71  HDVAEPDGQVDLDGCVEPGISLSTSAVLSISLDSPRRRYFICTIGNHCNAGMKFAVDVF- 130
           H+ A P  Q +LDGCV+PGI +    V  + LD P RRYFIC +GNHCN GMKFA+DV  
Sbjct: 70  HNYAMPGSQAELDGCVKPGI-VFVGNVFPV-LDRPGRRYFICEVGNHCNLGMKFAIDVMP 129

Query: 131 ----INPNSAM 137
               + PN+A+
Sbjct: 130 ILGSMPPNAAL 138

[Close]

BLAST of Csa1G348440 vs. TrEMBL
Match: A0A0A0KAM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G018590 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.5e-31
Identity = 76/159 (47.80%), Postives = 100/159 (62.89%), Query Frame = 1


Query: 7   SLSSIACL-LLVGAFLHVASAVDYDVGGDFGWSLPPNPTFFSDWARNKTFFVGDKLVFRS 66
           ++SS A   LL+G  LHV  AV++ VGG+FGW+LP  PTFFSDWA N+TFFV DKL+F S
Sbjct: 5   TISSFAFFFLLLGVLLHVGVAVEHKVGGNFGWNLPSTPTFFSDWASNRTFFVDDKLIFES 64

Query: 67  KASETHDVAEPDGQVDLDGCVEPGISLSTSAVLSISLDSPRRRYFICTIGNHCNAGMKFA 126
           +++E H + +P  Q D DGCV P  S     V  ISL  P RRYF+ T G+ C AGMKFA
Sbjct: 65  RSNEVHSIGQPISQADFDGCVNP--SFVFRKVQFISLSQPMRRYFMSTFGDDCEAGMKFA 124

Query: 127 VDVFINPNSAMPPPPSSASSLRFGAVL----AAAMAGLF 161
           +++       +P P +SA+ +    +L    A  MA LF
Sbjct: 125 INI-------LPKPRNSAAKVGAWPMLLFSIATIMANLF 154

[Close]

BLAST of Csa1G348440 vs. TrEMBL
Match: W9SB29_9ROSA (Blue copper protein OS=Morus notabilis GN=L484_016643 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.8e-20
Identity = 56/159 (35.22%), Postives = 88/159 (55.35%), Query Frame = 1


Query: 11  IACLLLVG-AFLHVASAVDYDVGGDFGWSLPPNPTFFSDWARNKTFFVGDKLVFRSKASE 70
           + CLL++  A L  A+A  Y VG   GW++PPN +F+SDW  +KTF +GD+++F    + 
Sbjct: 4   MGCLLIITVALLKGATAESYVVGDSLGWTVPPNTSFYSDWTNSKTFHIGDEVLFNWTGTL 63

Query: 71  THDVAEPDGQVDLDGCVEPGISLSTSAVLSISLDSPRRRYFICTIGNHCNAGMKFAVDVF 130
            H+VAE     + + C +PGI   +    + +L +   R+F+CT+ NHC  GMK  V V 
Sbjct: 64  DHNVAEVSTLAEYENCTKPGIVYLSG--YTANLIANGSRFFLCTVDNHCELGMKMIVTVG 123

Query: 131 INPNSA---MPPPPSSASSLRFGAVLAAAMAGLFFLLTI 166
              N++     PPPS +S        A A+  +F L+ +
Sbjct: 124 SPTNTSSTLAAPPPSDSSYSAPSLTFAGALVSVFSLIVV 160

[Close]

BLAST of Csa1G348440 vs. TAIR10
Match: AT5G20230.1 (AT5G20230.1 blue-copper-binding protein)

HSP 1 Score: 82.4 bits (202), Expect = 2.9e-16
Identity = 54/144 (37.50%), Postives = 72/144 (50.00%), Query Frame = 1


Query: 10  SIACLLLVGAFLHVASAVDYDVGGDFGWSLPPNPTFFSDWARNKTFFVGDKLVFRSKASE 69
           ++  L+LV A + V  A DYDVG D  W+ P +P F++ WA  KTF VGD+L F   A  
Sbjct: 7   TVTFLVLVFAAV-VVFAEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGR 66

Query: 70  THDVAEPDGQVDLDGCV-EPGISLSTSAVLSISLDSPRRRYFICTIGNHCNAGMKFAVDV 129
            HDVA    +   + C  E  IS  T   + I L++   +YFICT+G+HC  G K ++ V
Sbjct: 67  -HDVAVVS-EAAFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITV 126

Query: 130 F-------INPNSAMPPPPSSASS 146
                     P +   P P S  S
Sbjct: 127 VAAGATGGATPGAGATPAPGSTPS 147

[Close]

BLAST of Csa1G348440 vs. TAIR10
Match: AT2G32300.1 (AT2G32300.1 uclacyanin 1)

HSP 1 Score: 69.3 bits (168), Expect = 2.5e-12
Identity = 49/146 (33.56%), Postives = 74/146 (50.68%), Query Frame = 1


Query: 4   KLMSLSSIACLLLVGAFLHVASAVDYDVGGDFGWSLPPNPTFFSDWARNKTFFVGDKLVF 63
           +++ + S+    L+G    +  A D+ +GG  GW++  +      WA  +TF VGD LVF
Sbjct: 5   EMLIIISVLATTLIG----LTVATDHTIGGPSGWTVGAS---LRTWAAGQTFAVGDNLVF 64

Query: 64  RSKASETHDVAEPDGQVDLDGC--VEPGISLSTSAVLSISLDSPRRRYFICTIGNHCNAG 123
              A+  HDV E   + + D C  V+P I+ +    L + L +P +RYFIC +  HC+ G
Sbjct: 65  SYPAA-FHDVVEVT-KPEFDSCQAVKPLITFANGNSL-VPLTTPGKRYFICGMPGHCSQG 124

Query: 124 MKFAVDVFINPNSAMPPP-PSSASSL 147
           MK  V+V      A   P P++  SL
Sbjct: 125 MKLEVNVVPTATVAPTAPLPNTVPSL 140

[Close]

BLAST of Csa1G348440 vs. TAIR10
Match: AT1G22480.1 (AT1G22480.1 Cupredoxin superfamily protein)

HSP 1 Score: 59.7 bits (143), Expect = 2.0e-09
Identity = 42/127 (33.07%), Postives = 57/127 (44.88%), Query Frame = 1


Query: 11  IACLLLVGAFLHVASAVDYDVGGDFGWSLPPNPTFFSDWARNKTFFVGDKLVFRSKASET 70
           + CL+L+ + +  AS+    V    G    P  T        KTF VGD +VF   A  T
Sbjct: 5   LGCLVLIFSMVAQASSASLTVNWSLGTDYTPLTT-------GKTFSVGDTIVFNYGAGHT 64

Query: 71  HDVAEPDGQVDLDGC-VEPGISLSTSAVLSISLDSPRRRYFICTIGNHCNAGMKFAVDVF 130
            D    +   D   C +   I+  +S   +I+L +   RYFIC I  HC AGMK AV V 
Sbjct: 65  VDEVSEN---DYKSCTLGNSITSDSSGTTTIALTTTGPRYFICGIPGHCAAGMKLAVTVA 121

Query: 131 INPNSAM 137
            N ++ +
Sbjct: 125 SNSSNGV 121

[Close]

BLAST of Csa1G348440 vs. TAIR10
Match: AT4G31840.1 (AT4G31840.1 early nodulin-like protein 15)

HSP 1 Score: 58.2 bits (139), Expect = 5.8e-09
Identity = 41/143 (28.67%), Postives = 62/143 (43.36%), Query Frame = 1


Query: 1   MATKLMSLSSIACLLLVGAFLHVASAVDYDVGGDFG-WSLPPNPTF-FSDWARNKTFFVG 60
           MA+  + ++   C+ +   F    +A +  VGG  G W +PP+ +F F++WA+   F VG
Sbjct: 1   MASSSLLVTIFLCISVF--FFSSVNANEVTVGGKSGDWKIPPSSSFSFNEWAQKARFKVG 60

Query: 61  DKLVFRSKASETHDVAEPDGQVDLDGCVEPGISLSTSAVLSISLDSPRRRYFICTIGNHC 120
           D +VF+ +A +   +       +      P  S  T     + LD     YF+     HC
Sbjct: 61  DFIVFKYEAGKDSVLQVTREAYEKCNTTSPKASY-TDGNTKVKLDQAGPVYFVSGTEGHC 120

Query: 121 NAGMKFAVDVFINPNSAMPPPPS 142
             G K  + V    NSA  P PS
Sbjct: 121 QKGQKLRLVVITPRNSAFSPGPS 140

[Close]

BLAST of Csa1G348440 vs. TAIR10
Match: AT2G25060.1 (AT2G25060.1 early nodulin-like protein 14)

HSP 1 Score: 56.2 bits (134), Expect = 2.2e-08
Identity = 44/153 (28.76%), Postives = 69/153 (45.10%), Query Frame = 1


Query: 6   MSLSSIACLLLVGAFLH-VASAVDYDVGGDFG-WSLPPNPTF-FSDWARNKTFFVGDKLV 65
           M+ SS+   +    FL  +A+A +  VGG  G W +PP+ ++ F++WA+   F VGD +V
Sbjct: 7   MASSSLHVAIFSLIFLFSLAAANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIV 66

Query: 66  FRSKASETHDVAEPDGQVDLDGCVEPGISLSTSAVLSISLDSPRRRYFICTIGNHCNAGM 125
           FR ++ +   +       +      P ++  T     + LD     YFI     HC  G 
Sbjct: 67  FRYESGKDSVLEVTKEAYNSCNTTNP-LANYTDGETKVKLDRSGPFYFISGANGHCEKGQ 126

Query: 126 KFAVDVFINPNSAMPPPPSSASSLRFGAVLAAA 156
           K ++ V I+P  ++  P  S      G  LA A
Sbjct: 127 KLSL-VVISPRHSVISPAPSPVEFEDGPALAPA 157

[Close]

BLAST of Csa1G348440 vs. NCBI nr
Match: gi|449464642|ref|XP_004150038.1| (PREDICTED: umecyanin [Cucumis sativus])

HSP 1 Score: 334.3 bits (856), Expect = 1.2e-88
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1


Query: 1   MATKLMSLSSIACLLLVGAFLHVASAVDYDVGGDFGWSLPPNPTFFSDWARNKTFFVGDK 60
           MATKLMSLSSIACLLLVGAFLHVASAVDYDVGGDFGWSLPPNPTFFSDWARNKTFFVGDK
Sbjct: 1   MATKLMSLSSIACLLLVGAFLHVASAVDYDVGGDFGWSLPPNPTFFSDWARNKTFFVGDK 60

Query: 61  LVFRSKASETHDVAEPDGQVDLDGCVEPGISLSTSAVLSISLDSPRRRYFICTIGNHCNA 120
           LVFRSKASETHDVAEPDGQVDLDGCVEPGISLSTSAVLSISLDSPRRRYFICTIGNHCNA
Sbjct: 61  LVFRSKASETHDVAEPDGQVDLDGCVEPGISLSTSAVLSISLDSPRRRYFICTIGNHCNA 120

Query: 121 GMKFAVDVFINPNSAMPPPPSSASSLRFGAVLAAAMAGLFFLLTI 166
           GMKFAVDVFINPNSAMPPPPSSASSLRFGAVLAAAMAGLFFLLTI
Sbjct: 121 GMKFAVDVFINPNSAMPPPPSSASSLRFGAVLAAAMAGLFFLLTI 165

[Close]

BLAST of Csa1G348440 vs. NCBI nr
Match: gi|659086519|ref|XP_008443976.1| (PREDICTED: umecyanin-like [Cucumis melo])

HSP 1 Score: 301.6 bits (771), Expect = 8.5e-79
Identity = 148/167 (88.62%), Postives = 157/167 (94.01%), Query Frame = 1


Query: 1   MATKLMSLSSIACLLLVGAFLHVASAVDYDVGGDFGWSLPPNPTFFSDWARNKTFFVGDK 60
           MATKLMS SSIACL LVGA L V SAVDYDVGGDFGW+LPPNPTFFSDW RNKTFFVGDK
Sbjct: 1   MATKLMSSSSIACLFLVGALLQVVSAVDYDVGGDFGWNLPPNPTFFSDWTRNKTFFVGDK 60

Query: 61  LVFRSKASETHDVAEPDGQVDLDGCVEPGISLSTSAVLSISLDSPRRRYFICTIGNHCNA 120
           LVFRSK+SE+HDVAEP+ Q DLDGCV+PGI+LSTSAVLSISLDSPRRRYFICTIGNHCNA
Sbjct: 61  LVFRSKSSESHDVAEPERQTDLDGCVKPGITLSTSAVLSISLDSPRRRYFICTIGNHCNA 120

Query: 121 GMKFAVDVFINPNSAM--PPPPSSASSLRFGAVLAAAMAGLFFLLTI 166
           GMKF+VDVF+NPNSA+  PPPPSSASSLRFGAVLAAAMAGLFFLLTI
Sbjct: 121 GMKFSVDVFVNPNSALLPPPPPSSASSLRFGAVLAAAMAGLFFLLTI 167

[Close]

BLAST of Csa1G348440 vs. NCBI nr
Match: gi|700210244|gb|KGN65340.1| (hypothetical protein Csa_1G348940 [Cucumis sativus])

HSP 1 Score: 259.2 bits (661), Expect = 4.8e-66
Identity = 128/164 (78.05%), Postives = 139/164 (84.76%), Query Frame = 1


Query: 1   MATKLMSLSSIACLLLVGAFLHVASAVDYDVGGDFGWSLPPNPTFFSDWARNKTFFVGDK 60
           MATKLMS SSIAC+ LVGA L V    DYDVGGDFGW++PP PTFFSDW  NKTFFVGDK
Sbjct: 1   MATKLMSWSSIACVFLVGALLQVVYGFDYDVGGDFGWNVPPIPTFFSDWTHNKTFFVGDK 60

Query: 61  LVFRSKASETHDVAEPDGQVDLDGCVEPGISLST-SAVLSISLDSPRRRYFICTIGNHCN 120
           LVF+S +SE HDVAEP+ Q D DGCV+PGISLST SA+LS+ LDSPRRRYFICTIGNHCN
Sbjct: 61  LVFQSNSSEFHDVAEPESQTDFDGCVKPGISLSTSSAMLSVLLDSPRRRYFICTIGNHCN 120

Query: 121 AGMKFAVDVFINPNSAM----PPPPSSASSLRFGAVLAAAMAGL 160
           AGMKF VDVF+NPNSA+    PPPPSSASSLRFGAV AAAM GL
Sbjct: 121 AGMKFTVDVFVNPNSALLPPPPPPPSSASSLRFGAVSAAAMTGL 164

[Close]

BLAST of Csa1G348440 vs. NCBI nr
Match: gi|659086517|ref|XP_008443975.1| (PREDICTED: umecyanin-like [Cucumis melo])

HSP 1 Score: 158.3 bits (399), Expect = 1.2e-35
Identity = 77/131 (58.78%), Postives = 92/131 (70.23%), Query Frame = 1


Query: 8   LSSIACLLLVGAFLHVASAVDYDVGGDFGWSLPPNPTFFSDWARNKTFFVGDKLVFRSKA 67
           L+ +A  L +   L   +A+DY VGGDFGW+LPP PTFFS+WA NKTFFVGD L F S A
Sbjct: 7   LTFLASFLFIAVLLPAVAAIDYQVGGDFGWNLPPTPTFFSEWASNKTFFVGDTLRFNSSA 66

Query: 68  SETHDVAEPDGQVDLDGCVEPGISLSTSAVLSISLDSPRRRYFICTIGNHCNAGMKFAVD 127
           +ETH+ A P  Q +LDGCV+PGI +    V  + LD P R+YFIC +GNHCN GMKFAVD
Sbjct: 67  NETHNYAMPGSQAELDGCVKPGI-VFMGGVYPV-LDRPGRKYFICEVGNHCNLGMKFAVD 126

Query: 128 VFINPNSAMPP 139
           V   P S MPP
Sbjct: 127 VMPIPGS-MPP 134

[Close]

BLAST of Csa1G348440 vs. NCBI nr
Match: gi|449467497|ref|XP_004151459.1| (PREDICTED: umecyanin-like [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 5.8e-35
Identity = 75/131 (57.25%), Postives = 92/131 (70.23%), Query Frame = 1


Query: 11  IACLLLVGAFLHVASAVDYDVGGDFGWSLPPNPTFFSDWARNKTFFVGDKLVFRSKASET 70
           +A  L +   L   +AVDY VGGDFGW+LPP PTFFS+WA NKTFFVGD+L F S A+ET
Sbjct: 10  LASFLFIAVLLPAVAAVDYQVGGDFGWNLPPTPTFFSEWASNKTFFVGDRLRFNSSANET 69

Query: 71  HDVAEPDGQVDLDGCVEPGISLSTSAVLSISLDSPRRRYFICTIGNHCNAGMKFAVDVF- 130
           H+ A P  Q +LDGCV+PGI +    V  + LD P RRYFIC +GNHCN GMKFA+DV  
Sbjct: 70  HNYAMPGSQAELDGCVKPGI-VFVGNVFPV-LDRPGRRYFICEVGNHCNLGMKFAIDVMP 129

Query: 131 ----INPNSAM 137
               + PN+A+
Sbjct: 130 ILGSMPPNAAL 138

The following BLAST results are available for this feature:

BLAST of Csa1G348440 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CPC_CUCSA	4.6e-16	38.98	Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3	[more]
BCB1_ARATH	5.1e-15	37.50	Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2	[more]
UMEC_ARMRU	1.1e-14	43.14	Umecyanin OS=Armoracia rusticana PE=1 SV=1	[more]
BCP_PEA	5.4e-09	31.94	Blue copper protein OS=Pisum sativum PE=2 SV=1	[more]
ENL1_ARATH	3.9e-07	28.76	Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2	[more]

BLAST of Csa1G348440 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWH3_CUCSA	8.2e-89	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G348440 PE=4 SV=1	[more]
A0A0A0LTT8_CUCSA	3.4e-66	78.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G348940 PE=4 SV=1	[more]
A0A0A0LZE7_CUCSA	4.0e-35	57.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G348950 PE=4 SV=1	[more]
A0A0A0KAM8_CUCSA	3.5e-31	47.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G018590 PE=4 SV=1	[more]
W9SB29_9ROSA	2.8e-20	35.22	Blue copper protein OS=Morus notabilis GN=L484_016643 PE=4 SV=1	[more]

BLAST of Csa1G348440 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G20230.1	2.9e-16	37.50	blue-copper-binding protein	[more]
AT2G32300.1	2.5e-12	33.56	uclacyanin 1	[more]
AT1G22480.1	2.0e-09	33.07	Cupredoxin superfamily protein	[more]
AT4G31840.1	5.8e-09	28.67	early nodulin-like protein 15	[more]
AT2G25060.1	2.2e-08	28.76	early nodulin-like protein 14	[more]

BLAST of Csa1G348440 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464642\|ref\|XP_004150038.1\|	1.2e-88	100.00	PREDICTED: umecyanin [Cucumis sativus]	[more]
gi\|659086519\|ref\|XP_008443976.1\|	8.5e-79	88.62	PREDICTED: umecyanin-like [Cucumis melo]	[more]
gi\|700210244\|gb\|KGN65340.1\|	4.8e-66	78.05	hypothetical protein Csa_1G348940 [Cucumis sativus]	[more]
gi\|659086517\|ref\|XP_008443975.1\|	1.2e-35	58.78	PREDICTED: umecyanin-like [Cucumis melo]	[more]
gi\|449467497\|ref\|XP_004151459.1\|	5.8e-35	57.25	PREDICTED: umecyanin-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003245	Phytocyanin_dom
IPR008972	Cupredoxin

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G348440.1	Csa1G348440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PRODOM	PD003122		coord: 62..128 score: 3.
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 37..122 score: 4.5
IPR003245	Phytocyanin domain	PROFILE	PS51485	PHYTOCYANIN	coord: 27..130 score: 28
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 25..128 score: 7.6
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 25..128 score: 2.48
None	No IPR available	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 2..145 score: 4.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G348440	Cla012222	Watermelon (97103) v1	cuwmB081
Csa1G348440	MELO3C010323	Melon (DHL92) v3.5.1	cumeB061
Csa1G348440	ClCG11G003190	Watermelon (Charleston Gray)	cuwcgB007
Csa1G348440	Lsi11G003310	Bottle gourd (USVL1VR-Ls)	culsiB008
Csa1G348440	Lsi06G009850	Bottle gourd (USVL1VR-Ls)	culsiB060
Csa1G348440	MELO3C010323.2	Melon (DHL92) v3.6.1	cumedB051
Csa1G348440	Cla97C06G120510	Watermelon (97103) v2	cuwmbB067
Csa1G348440	Bhi02G000808	Wax gourd	cuwgoB100
Csa1G348440	CSPI01G19030	Wild cucumber (PI 183967)	cpicuB001
Csa1G348440	CmaCh10G005380	Cucurbita maxima (Rimu)	cmacuB062
Csa1G348440	CmoCh10G005750	Cucurbita moschata (Rifu)	cmocuB051
Csa1G348440	Cp4.1LG18g05060	Cucurbita pepo (Zucchini)	cpecuB354
Csa1G348440	CsGy1G019030	Cucumber (Gy14) v2	cgybcuB002
Csa1G348440	Carg09926	Silver-seed gourd	carcuB0135

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Csa1G348440	Csa2G006880	Cucumber (Chinese Long) v2	cucuB005

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G348440	Wax gourd	cuwgoB001
Csa1G348440	Wax gourd	cuwgoB004
Csa1G348440	Cucurbita maxima (Rimu)	cmacuB111
Csa1G348440	Cucurbita moschata (Rifu)	cmocuB097
Csa1G348440	Melon (DHL92) v3.5.1	cumeB003
Csa1G348440	Watermelon (Charleston Gray)	cuwcgB069
Csa1G348440	Watermelon (97103) v1	cuwmB077
Csa1G348440	Cucurbita pepo (Zucchini)	cpecuB644
Csa1G348440	Silver-seed gourd	carcuB0040