Csa1G302200 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATGGGGAAAAATGAATGAAGAATGAAGATCACTATTATGGGTAATTCATATGAATCACAATCATCGGCGCTGAGAAATCGTTAAAGGAAACATCCCATCTGCTTTGTACTTGTGCACCCTTCGTCAACGTTTTTGTTATACTTTATATTAAAAAATTTCATCATCTGTAGAAACATCACTCTGAATCTTTCCTCAATTTCAGGTACCCAATTTGGAGCTCTCTATTGTTTTTGTTTCGTTTTCCCATGTTAATTTTGATTCTCTGAAACCCCATCTCCAACCCCAAGTTTTTCTTTTTCTTTTTTTTAACGATTGACTTTGAGATATGTAATTCCTGTTCTGGGTATTGGTTTTCGATCTCTGAATTTGTGATAAAGTTTGTTTTAGGGTTGTGCAGGCTTTGGATTTTTGGAGAAGAAGATAATCAATGAAAGGGGAAGTACAATTGGAGTCATCAATTGGGCAAAACCCTAGTGATTCTGATCCTCTGCTCGAGAATCAGAACGGTTCATCATCCCATGGAACCTCTGATGAAATCAAGGATGAGGATACTGAAGCTGGTTCCATTCCTTGTTGTCGTATTTGCTTAGAGAGCGATGCCGAACCAGGTGAATTTCATTGTTAGTTTGGTTGTTGGATTATCTTTTCTTGCAATTTCTTGCTCAACTAAAATTTCATTTTATTGTTGGCTCAATTCTGTTGAATGTTAGCCCCATTATATATTGGGGGGTAATTCTTTTGTTTATACTCTCTCATTATCACTAGAATTGAAAATCCCTTTCAATTTTGGTCTTGCTGAACCCTGTTTTTGATGCAAAGTCACTTTTGTGTTTGGTCTTTAATGCTTGTAAAATTATATAAGTTCTGTTTTTCATAGCTCGGGTAATACCTTCCTCCACTTGGCTCAAATGAAATTTTCCATTTTACAGAAGATGAACTGATTTCTCCATGCATGTGCAAAGGCACACAGCAGTTTGTCCATCGATCTTGTCTTGATCATTGGCGCTCCGTTAAGGCAAATTTCTTTATTTTAGTTCTTCTATGCTGTTCCTGCTTATGACTATGAAGGATTTGCTTGTTTCCTTTTCTATTTTCTTATAATTTTAATCAATCTGAAAGAATTCCCATATTTCTGCAGGAAGGGTTTGCTTTCTCGCATTGCACAACTTGCAAAGCCCAATTTCACCTGAAAGTTTCCTTATTTGAGGACAACTCTTGGCGTAAAGTTAAATTCAGGCTTTTTGTGGCAAGAGATGTTCTCCTTGTATTTATAGCTGTACAAACTGTGAGTTGCCATAAATTTTCTACCTCTCATAGAATTATTATTAAAATCTTGAAGCTTGAGTGTTTATTTATCAAAATAATCCATTACTGTCCTGTTTTTTTTTTTAAATTTCGAGGTGTATGATTGTGATTTGTATCAAACTGCTATGTGGTTATTCAACTTTTAGTTTTTTTTAGAACTTAAGGACACGGTTGTACATCCTATAGATTACTACCTGTCAAGGAAGCTGCCTATCACTTTTTGTTTATCAAGCTTACAAGAACTTTTTGATTTTTGTATTTTCAAGACGATAGGATTTTTTTTTACTAGGTACGCCCATCTTAAGCAGTTGTGATAATTTATTTCATTTAAGCATATCTTGTCATTTAGATGACGATCAACCCAAAATACTAGTATTGAATAAATATTTGAATATAAACTCATGGAGGATTTTATCCTTTTTGTAGTTAATAGCGGCAATCGGTGGTTATGCATATATTATGGACAAAGACGGGGCATTTAGGAATTCTTTCAGTGATGGATGGGATCGTATTCTGTCTAAACATCCTATTCCATTTTATTATTGTATTGGTAAGCTACTTTGGAACTAAACTGGTCAGCTGCTTCTTTAAGAATAGGATCTGAGGTGTGTCTGATTATCACAAGTACAATTTCTTTTATTCATAAATTGACTTTCTGTGCATTGCTGTTCGTTCATGCTTCATATAAAGCAGCAATGATGCAAAATCCCTCATTTCATTAGTGTTGAAAACTCATTACTAGTTAATTAAGGAAAATGAGTTTCTTTTTCATCCTTCCTGTCAAAATACTCATTTTACTGTGGATCATTAATGTCTTGTCAATACCTCCCCTCCTCTATAATATATTTAAAATCTCAGTTAAATTGACTTCTTATCAAGGTAGATTCAGCTGCCATTTCAAATTTGATACTGATGTCTTATCGTTTGTTTGTTTCCTCTTCTTTAATTTGAATAAATATCAACGTGGGAAAGGGATATTTTTGTGCCAAGCTGGGTTTTGTGTGTTTTATGGGGTTTGTGAGACAAGAAAAGTAGTATCCATCCTCAAGGGGAAATATTTCTTTTGATTATGCTTTGGGCTCTTGAGATTCTCTGTTTCTCTTTAGGCAGGCCCCTTTTTTTATTTGCTAGGTCTTATTTTAACTGGACCCCTTTCAGTAGTTGGCTCCCTATTGTGGGTTTGTCTATCTGGCTTTTCTGTGTCCTCTTTCATTTTTTCTCAATGAAAGTTAATTTTTTCATTAAATAAATAAATGCCCTTGTTGCCATTTCTTTCTTAACATTTTTCTTTTGCCAAATCTAACCAAGCCGTAGGTTTCAATTATTCTTAACCAATGACTTGTTTCATGGTTTTGAACTACTAATGACTCTATGTCTGCATATGTTTTCGTATATCAGGGGTCCTAGCTTTCTTTGTTCTGCTCGGATTCTTCGGGCTCATACTACATTGTTCATCCCTGAATAGTAATGACCCAAGAGTTGCTGGGTGTCACAACTGTTGCTATGGATGGGGAATCTTGGATTGTTTCCCTGCATCAATGGAAGCCTGTTTTGCACTTGTTATCGTTTTCGTAGTTATCTTTGTAATCCTTGGCATAGCTTATGGCTTCCTTGCTGCTACTATGGCCATTCAGAGGATCTGGCAAAGACATTACCACATTCTCACAAAAAGGGAACTGACTAAAGTAAGATTCTAAACCTGTTAAATGTTTTTTGTTGGTGAATGTTAATACCTGTTTTGGTGGTTTTAATACTTCACTTCCTGGGATGTAGGAATATGTGGTGGAGGATCTTCATGGATGTTATACTCCTCCAAAATTGGAACCAGAACATGAACAGCACTTGAAAATGCTACAGCTTCTGTAATGAAACGGTAAAAATGAGGTGTTAAATTTCTGTCATTTAGTTTTTTTTTTATGTTGTTTTGTTTGTGGAATTTGCTTGACAAGGTTGTTATAAATGAGCAATGTGGAAATTAGATTTTAACT ATGAAAGGGGAAGTACAATTGGAGTCATCAATTGGGCAAAACCCTAGTGATTCTGATCCTCTGCTCGAGAATCAGAACGGTTCATCATCCCATGGAACCTCTGATGAAATCAAGGATGAGGATACTGAAGCTGGTTCCATTCCTTGTTGTCGTATTTGCTTAGAGAGCGATGCCGAACCAGAAGATGAACTGATTTCTCCATGCATGTGCAAAGGCACACAGCAGTTTGTCCATCGATCTTGTCTTGATCATTGGCGCTCCGTTAAGGAAGGGTTTGCTTTCTCGCATTGCACAACTTGCAAAGCCCAATTTCACCTGAAAGTTTCCTTATTTGAGGACAACTCTTGGCGTAAAGTTAAATTCAGGCTTTTTGTGGCAAGAGATGTTCTCCTTGTATTTATAGCTGTACAAACTTTAATAGCGGCAATCGGTGGTTATGCATATATTATGGACAAAGACGGGGCATTTAGGAATTCTTTCAGTGATGGATGGGATCGTATTCTGTCTAAACATCCTATTCCATTTTATTATTGTATTGGGGTCCTAGCTTTCTTTGTTCTGCTCGGATTCTTCGGGCTCATACTACATTGTTCATCCCTGAATAGTAATGACCCAAGAGTTGCTGGGTGTCACAACTGTTGCTATGGATGGGGAATCTTGGATTGTTTCCCTGCATCAATGGAAGCCTGTTTTGCACTTGTTATCGTTTTCGTAGTTATCTTTGTAATCCTTGGCATAGCTTATGGCTTCCTTGCTGCTACTATGGCCATTCAGAGGATCTGGCAAAGACATTACCACATTCTCACAAAAAGGGAACTGACTAAAGAATATGTGGTGGAGGATCTTCATGGATGTTATACTCCTCCAAAATTGGAACCAGAACATGAACAGCACTTGAAAATGCTACAGCTTCTGTAA ATGAAAGGGGAAGTACAATTGGAGTCATCAATTGGGCAAAACCCTAGTGATTCTGATCCTCTGCTCGAGAATCAGAACGGTTCATCATCCCATGGAACCTCTGATGAAATCAAGGATGAGGATACTGAAGCTGGTTCCATTCCTTGTTGTCGTATTTGCTTAGAGAGCGATGCCGAACCAGAAGATGAACTGATTTCTCCATGCATGTGCAAAGGCACACAGCAGTTTGTCCATCGATCTTGTCTTGATCATTGGCGCTCCGTTAAGGAAGGGTTTGCTTTCTCGCATTGCACAACTTGCAAAGCCCAATTTCACCTGAAAGTTTCCTTATTTGAGGACAACTCTTGGCGTAAAGTTAAATTCAGGCTTTTTGTGGCAAGAGATGTTCTCCTTGTATTTATAGCTGTACAAACTTTAATAGCGGCAATCGGTGGTTATGCATATATTATGGACAAAGACGGGGCATTTAGGAATTCTTTCAGTGATGGATGGGATCGTATTCTGTCTAAACATCCTATTCCATTTTATTATTGTATTGGGGTCCTAGCTTTCTTTGTTCTGCTCGGATTCTTCGGGCTCATACTACATTGTTCATCCCTGAATAGTAATGACCCAAGAGTTGCTGGGTGTCACAACTGTTGCTATGGATGGGGAATCTTGGATTGTTTCCCTGCATCAATGGAAGCCTGTTTTGCACTTGTTATCGTTTTCGTAGTTATCTTTGTAATCCTTGGCATAGCTTATGGCTTCCTTGCTGCTACTATGGCCATTCAGAGGATCTGGCAAAGACATTACCACATTCTCACAAAAAGGGAACTGACTAAAGAATATGTGGTGGAGGATCTTCATGGATGTTATACTCCTCCAAAATTGGAACCAGAACATGAACAGCACTTGAAAATGCTACAGCTTCTGTAA MKGEVQLESSIGQNPSDSDPLLENQNGSSSHGTSDEIKDEDTEAGSIPCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFIAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLEPEHEQHLKMLQLL*
BLAST of Csa1G302200 vs. Swiss-Prot
Match: MARH8_BOVIN (E3 ubiquitin-protein ligase MARCH8 OS=Bos taurus GN=MARCH8 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.6e-06 Identity = 32/127 (25.20%), Postives = 51/127 (40.16%), Query Frame = 1
BLAST of Csa1G302200 vs. Swiss-Prot
Match: MARH3_XENLA (E3 ubiquitin-protein ligase MARCH3 OS=Xenopus laevis GN=march3 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.1e-06 Identity = 25/60 (41.67%), Postives = 33/60 (55.00%), Query Frame = 1
BLAST of Csa1G302200 vs. Swiss-Prot
Match: MARH3_RAT (E3 ubiquitin-protein ligase MARCH3 OS=Rattus norvegicus GN=March3 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.1e-06 Identity = 25/57 (43.86%), Postives = 32/57 (56.14%), Query Frame = 1
BLAST of Csa1G302200 vs. Swiss-Prot
Match: MARH3_MOUSE (E3 ubiquitin-protein ligase MARCH3 OS=Mus musculus GN=March3 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.1e-06 Identity = 25/57 (43.86%), Postives = 32/57 (56.14%), Query Frame = 1
BLAST of Csa1G302200 vs. Swiss-Prot
Match: MARH3_HUMAN (E3 ubiquitin-protein ligase MARCH3 OS=Homo sapiens GN=MARCH3 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.1e-06 Identity = 25/57 (43.86%), Postives = 32/57 (56.14%), Query Frame = 1
BLAST of Csa1G302200 vs. TrEMBL
Match: A0A0A0LU16_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G302200 PE=4 SV=1) HSP 1 Score: 641.0 bits (1652), Expect = 7.6e-181 Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 1
BLAST of Csa1G302200 vs. TrEMBL
Match: W9R8X6_9ROSA (E3 ubiquitin-protein ligase MARCH8 OS=Morus notabilis GN=L484_025639 PE=4 SV=1) HSP 1 Score: 565.1 bits (1455), Expect = 5.3e-158 Identity = 265/305 (86.89%), Postives = 287/305 (94.10%), Query Frame = 1
BLAST of Csa1G302200 vs. TrEMBL
Match: A0A0S3R797_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G439700 PE=4 SV=1) HSP 1 Score: 562.0 bits (1447), Expect = 4.5e-157 Identity = 265/308 (86.04%), Postives = 284/308 (92.21%), Query Frame = 1
BLAST of Csa1G302200 vs. TrEMBL
Match: A0A0L9TRG0_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g263200 PE=4 SV=1) HSP 1 Score: 562.0 bits (1447), Expect = 4.5e-157 Identity = 265/308 (86.04%), Postives = 284/308 (92.21%), Query Frame = 1
BLAST of Csa1G302200 vs. TrEMBL
Match: M5W2S2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008380mg PE=4 SV=1) HSP 1 Score: 558.9 bits (1439), Expect = 3.8e-156 Identity = 264/307 (85.99%), Postives = 285/307 (92.83%), Query Frame = 1
BLAST of Csa1G302200 vs. TAIR10
Match: AT1G11020.1 (AT1G11020.1 RING/FYVE/PHD zinc finger superfamily protein) HSP 1 Score: 500.0 bits (1286), Expect = 1.1e-141 Identity = 245/320 (76.56%), Postives = 267/320 (83.44%), Query Frame = 1
BLAST of Csa1G302200 vs. TAIR10
Match: AT2G22120.2 (AT2G22120.2 RING/FYVE/PHD zinc finger superfamily protein) HSP 1 Score: 222.6 bits (566), Expect = 3.3e-58 Identity = 127/300 (42.33%), Postives = 155/300 (51.67%), Query Frame = 1
BLAST of Csa1G302200 vs. TAIR10
Match: AT1G50440.1 (AT1G50440.1 RING/FYVE/PHD zinc finger superfamily protein) HSP 1 Score: 126.7 bits (317), Expect = 2.4e-29 Identity = 74/172 (43.02%), Postives = 99/172 (57.56%), Query Frame = 1
HSP 2 Score: 68.6 bits (166), Expect = 7.9e-12 Identity = 33/67 (49.25%), Postives = 43/67 (64.18%), Query Frame = 1
BLAST of Csa1G302200 vs. NCBI nr
Match: gi|449464344|ref|XP_004149889.1| (PREDICTED: uncharacterized protein LOC101220313 [Cucumis sativus]) HSP 1 Score: 641.0 bits (1652), Expect = 1.1e-180 Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 1
BLAST of Csa1G302200 vs. NCBI nr
Match: gi|659130094|ref|XP_008464996.1| (PREDICTED: uncharacterized protein LOC103502724 [Cucumis melo]) HSP 1 Score: 637.9 bits (1644), Expect = 9.2e-180 Identity = 303/305 (99.34%), Postives = 304/305 (99.67%), Query Frame = 1
BLAST of Csa1G302200 vs. NCBI nr
Match: gi|1009161589|ref|XP_015898980.1| (PREDICTED: uncharacterized protein LOC107432369 [Ziziphus jujuba]) HSP 1 Score: 587.4 bits (1513), Expect = 1.4e-164 Identity = 276/305 (90.49%), Postives = 290/305 (95.08%), Query Frame = 1
BLAST of Csa1G302200 vs. NCBI nr
Match: gi|359484644|ref|XP_002281763.2| (PREDICTED: uncharacterized protein LOC100254401 [Vitis vinifera]) HSP 1 Score: 567.8 bits (1462), Expect = 1.2e-158 Identity = 265/305 (86.89%), Postives = 285/305 (93.44%), Query Frame = 1
BLAST of Csa1G302200 vs. NCBI nr
Match: gi|703108283|ref|XP_010098979.1| (E3 ubiquitin-protein ligase MARCH8 [Morus notabilis]) HSP 1 Score: 565.1 bits (1455), Expect = 7.6e-158 Identity = 265/305 (86.89%), Postives = 287/305 (94.10%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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