Csa1G294070 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G294070
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 13332258 .. 13332534 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGGGAGAAACAGGGCGGGTTGAGTACGTAAAGAAGGTATCAGGGGAAGTAGTAGTTATGAGTGATTTTGTGGAAGCTACGGTTAATGGAACACCAGACCGCTCCATCTATTCTAATTCTCCATCTTTAACACTTTCAGGTCCAATTTTCTAGAACGTAATTAATTCAAGCTTCTGTTTTCGATTATTTTGTTTTATGTTTATCTATTCATGGTTGGGTTTCTGTAGGTGAGCGTGACCCAAAGGCGAGGAGGAGGATTGTTGTTGATTGA

mRNA sequence

ATGGAGAAGGGAGAAACAGGGCGGGTTGAGTACGTAAAGAAGGTATCAGGGGAAGTAGTAGTTATGAGTGATTTTGTGGAAGCTACGGTTAATGGAACACCAGACCGCTCCATCTATTCTAATTCTCCATCTTTAACACTTTCAGGTGAGCGTGACCCAAAGGCGAGGAGGAGGATTGTTGTTGATTGA

Coding sequence (CDS)

ATGGAGAAGGGAGAAACAGGGCGGGTTGAGTACGTAAAGAAGGTATCAGGGGAAGTAGTAGTTATGAGTGATTTTGTGGAAGCTACGGTTAATGGAACACCAGACCGCTCCATCTATTCTAATTCTCCATCTTTAACACTTTCAGGTGAGCGTGACCCAAAGGCGAGGAGGAGGATTGTTGTTGATTGA

Protein sequence

MEKGETGRVEYVKKVSGEVVVMSDFVEATVNGTPDRSIYSNSPSLTLSGERDPKARRRIVVD*
Homology
[Close]
BLAST of Csa1G294070 vs. TrEMBL
Match: A0A0A0LZ66_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G294070 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 8.4e-26
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MEKGETGRVEYVKKVSGEVVVMSDFVEATVNGTPDRSIYSNSPSLTLSGERDPKARRRIV 60
          MEKGETGRVEYVKKVSGEVVVMSDFVEATVNGTPDRSIYSNSPSLTLSGERDPKARRRIV
Sbjct: 1  MEKGETGRVEYVKKVSGEVVVMSDFVEATVNGTPDRSIYSNSPSLTLSGERDPKARRRIV 60

Query: 61 VD 63
          VD
Sbjct: 61 VD 62

[Close]
BLAST of Csa1G294070 vs. NCBI nr
Match: gi|700210180|gb|KGN65276.1| (hypothetical protein Csa_1G294070 [Cucumis sativus])

HSP 1 Score: 123.6 bits (309), Expect = 1.2e-25
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MEKGETGRVEYVKKVSGEVVVMSDFVEATVNGTPDRSIYSNSPSLTLSGERDPKARRRIV 60
          MEKGETGRVEYVKKVSGEVVVMSDFVEATVNGTPDRSIYSNSPSLTLSGERDPKARRRIV
Sbjct: 1  MEKGETGRVEYVKKVSGEVVVMSDFVEATVNGTPDRSIYSNSPSLTLSGERDPKARRRIV 60

Query: 61 VD 63
          VD
Sbjct: 61 VD 62

[Close]
BLAST of Csa1G294070 vs. NCBI nr
Match: gi|659086186|ref|XP_008443802.1| (PREDICTED: uncharacterized protein LOC103487306 isoform X1 [Cucumis melo])

HSP 1 Score: 112.5 bits (280), Expect = 2.8e-22
Identity = 56/61 (91.80%), Postives = 58/61 (95.08%), Query Frame = 1 

Query: 2   EKGETGRVEYVKKVSGEVVVMSDFVEATVNGTPDRSIYSNSPSLTLSGERDPKARRRIVV 61
           EKGETGRVEY KKVSGEVVVMS+FVEATV+GTP RSIYSNSPSLTLSGERDPK RRRIVV
Sbjct: 105 EKGETGRVEYAKKVSGEVVVMSNFVEATVSGTPQRSIYSNSPSLTLSGERDPKVRRRIVV 164

Query: 62  D 63
           D
Sbjct: 165 D 165

The following BLAST results are available for this feature:
BLAST of Csa1G294070 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LZ66_CUCSA8.4e-26100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G294070 PE=4 SV=1[more]
BLAST of Csa1G294070 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700210180|gb|KGN65276.1|1.2e-25100.00hypothetical protein Csa_1G294070 [Cucumis sativus][more]
gi|659086186|ref|XP_008443802.1|2.8e-2291.80PREDICTED: uncharacterized protein LOC103487306 isoform X1 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G294070.1Csa1G294070.1mRNA