Csa1G277990 (gene) Cucumber (Chinese Long) v2

NameCsa1G277990
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 13231084 .. 13231441 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAATTAAACATCTTTCTTTAATAATAATGGCTAGTTTGAAATCTGACGTTTACCCAAGTGGGGGCATTGGAGGTACAATTCTCGTTGGGGTTGGAGCTGGAGTAGGAGCTGGTGGACCTGGAATTGGACACAGTGGAAGTGGTGGTGAGGGGACTGGATCTGGCTCTAAATCTATTGATGAACTCTAAATCTAAAGCAGGGTCTCAAATGGGTTCTAGGTCGGGTGGTCGTAGAGATGGACGTTCAGGTTATGGAGGAGATGATGAAAATGAGATGATATTATCTTCGATTAGCAGATTGATTATTAATTAAAAATATATAATTAACAGTAATCATGAATAAGAACAACAATTAATC

mRNA sequence

ATGGCTAGTTTGAAATCTGACGTTTACCCAAGTGGGGGCATTGGAGGTACAATTCTCGTTGGGGTTGGAGCTGGAGTAGGAGCTGGTGGACCTGGAATTGGACACAGTGGAAGTGGTGGTGAGGGGACTGGATCTGGCTCTAAATCTATTGATGAACTCTAA

Coding sequence (CDS)

ATGGCTAGTTTGAAATCTGACGTTTACCCAAGTGGGGGCATTGGAGGTACAATTCTCGTTGGGGTTGGAGCTGGAGTAGGAGCTGGTGGACCTGGAATTGGACACAGTGGAAGTGGTGGTGAGGGGACTGGATCTGGCTCTAAATCTATTGATGAACTCTAA

Protein sequence

MASLKSDVYPSGGIGGTILVGVGAGVGAGGPGIGHSGSGGEGTGSGSKSIDEL*
BLAST of Csa1G277990 vs. NCBI nr
Match: gi|700210167|gb|KGN65263.1| (hypothetical protein Csa_1G277990 [Cucumis sativus])

HSP 1 Score: 109.4 bits (272), Expect = 2.0e-21
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1

Query: 1  MASLKSDVYPSGGIGGTILVGVGAGVGAGGPGIGHSGSGGEGTGSGSKSIDEL 54
          MASLKSDVYPSGGIGGTILVGVGAGVGAGGPGIGHSGSGGEGTGSGSKSIDEL
Sbjct: 1  MASLKSDVYPSGGIGGTILVGVGAGVGAGGPGIGHSGSGGEGTGSGSKSIDEL 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|700210167|gb|KGN65263.1|2.0e-21100.00hypothetical protein Csa_1G277990 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU156927cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G277990.1Csa1G277990.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU156927CU156927transcribed_cluster