Csa1G186650 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G186650
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionSKIP interacting protein 18; contains IPR010544 (Kinesin-related conserved domain)
LocationChr1 : 11286730 .. 11287046 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGGTGTTTTACCAACTGAAGAGTACATGGAGGAGGAGCTGTTGTTCTTCACACATGAGCGTAAGGTCTGAGTTTTTATATATAGAGATATTCATGCCTAGATTATTTCATCCTCAACTTTGATATCTACAATTTTTGTAGAAAAACTACGAAAATCACCTCGAAGTCCTAGGAGTTGAAAAAAGTTCAAGATGAATTGGAAAGTTACAGGAATTTCTATGACTTGGGTGAAAGAGAAGTGCTAATGGAAGAGATTCAAGATTTAAGAAGTCGGCAGCAATACTACATTGATTCACCCTCTACATCCTCGTGA

mRNA sequence

ATGGACGGTGTTTTACCAACTGAAGAGTACATGGAGGAGGAGCTGTTGTTCTTCACACATGAGCGTAAGGAGTTGAAAAAAGTTCAAGATGAATTGGAAAGTTACAGGAATTTCTATGACTTGGGTGAAAGAGAAGTGCTAATGGAAGAGATTCAAGATTTAAGAAGTCGGCAGCAATACTACATTGATTCACCCTCTACATCCTCGTGA

Coding sequence (CDS)

ATGGACGGTGTTTTACCAACTGAAGAGTACATGGAGGAGGAGCTGTTGTTCTTCACACATGAGCGTAAGGAGTTGAAAAAAGTTCAAGATGAATTGGAAAGTTACAGGAATTTCTATGACTTGGGTGAAAGAGAAGTGCTAATGGAAGAGATTCAAGATTTAAGAAGTCGGCAGCAATACTACATTGATTCACCCTCTACATCCTCGTGA

Protein sequence

MDGVLPTEEYMEEELLFFTHERKELKKVQDELESYRNFYDLGEREVLMEEIQDLRSRQQYYIDSPSTSS*
Homology
[Close]
BLAST of Csa1G186650 vs. Swiss-Prot
Match: KN12B_ARATH (Kinesin-like protein KIN12B OS=Arabidopsis thaliana GN=KIN12B PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-12
Identity = 40/87 (45.98%), Postives = 53/87 (60.92%), Query Frame = 1 

Query: 1    MDGVLPTEEYMEEELLFFTHERK-----------------ELKKVQDELESYRNFY-DLG 60
            MDGVL  +++++EE     HE K                 ELK+VQ+ELES++NFY D+G
Sbjct: 922  MDGVLSKDDFLDEEFASLMHEHKLLKDMYENHPEVLQTRIELKRVQEELESFKNFYGDMG 981

Query: 61   EREVLMEEIQDLRSRQQYYIDSPSTSS 70
            EREVL+EEI DL+++ Q Y DS  TS+
Sbjct: 982  EREVLLEEIHDLKAQLQCYTDSSLTSA 1008

[Close]
BLAST of Csa1G186650 vs. Swiss-Prot
Match: KN12A_ARATH (Kinesin-like protein KIN12A OS=Arabidopsis thaliana GN=KIN12A PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 4.2e-11
Identity = 39/87 (44.83%), Postives = 52/87 (59.77%), Query Frame = 1 

Query: 1   MDGVLPTEEYMEEELLFFTHERK-----------------ELKKVQDELESYRNFY-DLG 60
           MDGVL  E++++EE     HE K                 EL++ Q+E+E+++NFY D+G
Sbjct: 912 MDGVLSKEDFLDEEFASLLHEHKLLKDMYQNHPEVLKTKIELERTQEEVENFKNFYGDMG 971

Query: 61  EREVLMEEIQDLRSRQQYYIDSPSTSS 70
           EREVL+EEIQDL+ + Q YID PS  S
Sbjct: 972 EREVLLEEIQDLKLQLQCYID-PSLKS 997

[Close]
BLAST of Csa1G186650 vs. TrEMBL
Match: A0A0A0LT44_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G186650 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 5.6e-31
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MDGVLPTEEYMEEELLFFTHERKELKKVQDELESYRNFYDLGEREVLMEEIQDLRSRQQY 60
          MDGVLPTEEYMEEELLFFTHERKELKKVQDELESYRNFYDLGEREVLMEEIQDLRSRQQY
Sbjct: 1  MDGVLPTEEYMEEELLFFTHERKELKKVQDELESYRNFYDLGEREVLMEEIQDLRSRQQY 60

Query: 61 YIDSPSTSS 70
          YIDSPSTSS
Sbjct: 61 YIDSPSTSS 69

[Close]
BLAST of Csa1G186650 vs. TrEMBL
Match: A0A0A0L899_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G172990 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.1e-22
Identity = 60/85 (70.59%), Postives = 63/85 (74.12%), Query Frame = 1 

Query: 1    MDGVLPTEEYMEEELLFFTHERK-----------------ELKKVQDELESYRNFYDLGE 60
            MDGVLPTEE+MEEELL  THE K                 ELKKVQDEL+SYRNFYDLGE
Sbjct: 955  MDGVLPTEEFMEEELLSLTHEHKILKEKYENHPEVLQRRMELKKVQDELQSYRNFYDLGE 1014

Query: 61   REVLMEEIQDLRSRQQYYIDSPSTS 69
            REVLMEEIQDLRS+ QYYIDSPS S
Sbjct: 1015 REVLMEEIQDLRSQLQYYIDSPSAS 1039

[Close]
BLAST of Csa1G186650 vs. TrEMBL
Match: A0A151U8K1_CAJCA (Kinesin-like protein KIF15 OS=Cajanus cajan GN=KK1_019847 PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 6.5e-19
Identity = 54/86 (62.79%), Postives = 61/86 (70.93%), Query Frame = 1 

Query: 1   MDGVLPTEEYMEEELLFFTHERK-----------------ELKKVQDELESYRNFYDLGE 60
           MDGVLPTEE+MEEEL+  THE K                 ELK+VQDELE Y+NFY LGE
Sbjct: 866 MDGVLPTEEFMEEELVALTHEHKLLKDKYENHPEVLKMEIELKRVQDELEKYQNFYKLGE 925

Query: 61  REVLMEEIQDLRSRQQYYIDSPSTSS 70
           REVLMEEIQ LRS+ Q+YIDS STS+
Sbjct: 926 REVLMEEIQSLRSQLQFYIDSSSTSA 951

[Close]
BLAST of Csa1G186650 vs. TrEMBL
Match: A0A0B2QWN3_GLYSO (Kinesin-like protein KIF15 OS=Glycine soja GN=glysoja_025215 PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 8.4e-19
Identity = 53/86 (61.63%), Postives = 61/86 (70.93%), Query Frame = 1 

Query: 1   MDGVLPTEEYMEEELLFFTHERK-----------------ELKKVQDELESYRNFYDLGE 60
           MDGVLPTEE+MEEEL+  THE K                 ELKKVQ+ELE Y+NFY LGE
Sbjct: 843 MDGVLPTEEFMEEELVVLTHEHKILKEKYENHPEVLKMEIELKKVQEELEKYQNFYKLGE 902

Query: 61  REVLMEEIQDLRSRQQYYIDSPSTSS 70
           REVLMEEIQ LRS+ Q+Y+DS STS+
Sbjct: 903 REVLMEEIQSLRSQLQFYVDSSSTSA 928

[Close]
BLAST of Csa1G186650 vs. TrEMBL
Match: I1MYC2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G003800 PE=3 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 8.4e-19
Identity = 53/86 (61.63%), Postives = 61/86 (70.93%), Query Frame = 1 

Query: 1   MDGVLPTEEYMEEELLFFTHERK-----------------ELKKVQDELESYRNFYDLGE 60
           MDGVLPTEE+MEEEL+  THE K                 ELKKVQ+ELE Y+NFY LGE
Sbjct: 843 MDGVLPTEEFMEEELVVLTHEHKILKEKYENHPEVLKMEIELKKVQEELEKYQNFYKLGE 902

Query: 61  REVLMEEIQDLRSRQQYYIDSPSTSS 70
           REVLMEEIQ LRS+ Q+Y+DS STS+
Sbjct: 903 REVLMEEIQSLRSQLQFYVDSSSTSA 928

[Close]
BLAST of Csa1G186650 vs. TAIR10
Match: AT3G23670.1 (AT3G23670.1 phragmoplast-associated kinesin-related protein, putative)

HSP 1 Score: 73.2 bits (178), Expect = 7.3e-14
Identity = 40/87 (45.98%), Postives = 53/87 (60.92%), Query Frame = 1 

Query: 1    MDGVLPTEEYMEEELLFFTHERK-----------------ELKKVQDELESYRNFY-DLG 60
            MDGVL  +++++EE     HE K                 ELK+VQ+ELES++NFY D+G
Sbjct: 922  MDGVLSKDDFLDEEFASLMHEHKLLKDMYENHPEVLQTRIELKRVQEELESFKNFYGDMG 981

Query: 61   EREVLMEEIQDLRSRQQYYIDSPSTSS 70
            EREVL+EEI DL+++ Q Y DS  TS+
Sbjct: 982  EREVLLEEIHDLKAQLQCYTDSSLTSA 1008

[Close]
BLAST of Csa1G186650 vs. TAIR10
Match: AT4G14150.1 (AT4G14150.1 phragmoplast-associated kinesin-related protein 1)

HSP 1 Score: 68.2 bits (165), Expect = 2.3e-12
Identity = 39/87 (44.83%), Postives = 52/87 (59.77%), Query Frame = 1 

Query: 1   MDGVLPTEEYMEEELLFFTHERK-----------------ELKKVQDELESYRNFY-DLG 60
           MDGVL  E++++EE     HE K                 EL++ Q+E+E+++NFY D+G
Sbjct: 912 MDGVLSKEDFLDEEFASLLHEHKLLKDMYQNHPEVLKTKIELERTQEEVENFKNFYGDMG 971

Query: 61  EREVLMEEIQDLRSRQQYYIDSPSTSS 70
           EREVL+EEIQDL+ + Q YID PS  S
Sbjct: 972 EREVLLEEIQDLKLQLQCYID-PSLKS 997

[Close]
BLAST of Csa1G186650 vs. NCBI nr
Match: gi|700209964|gb|KGN65060.1| (hypothetical protein Csa_1G186650 [Cucumis sativus])

HSP 1 Score: 141.0 bits (354), Expect = 8.1e-31
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MDGVLPTEEYMEEELLFFTHERKELKKVQDELESYRNFYDLGEREVLMEEIQDLRSRQQY 60
          MDGVLPTEEYMEEELLFFTHERKELKKVQDELESYRNFYDLGEREVLMEEIQDLRSRQQY
Sbjct: 1  MDGVLPTEEYMEEELLFFTHERKELKKVQDELESYRNFYDLGEREVLMEEIQDLRSRQQY 60

Query: 61 YIDSPSTSS 70
          YIDSPSTSS
Sbjct: 61 YIDSPSTSS 69

[Close]
BLAST of Csa1G186650 vs. NCBI nr
Match: gi|659077156|ref|XP_008439062.1| (PREDICTED: kinesin-like protein KIN12B [Cucumis melo])

HSP 1 Score: 112.5 bits (280), Expect = 3.1e-22
Identity = 60/85 (70.59%), Postives = 63/85 (74.12%), Query Frame = 1 

Query: 1    MDGVLPTEEYMEEELLFFTHERK-----------------ELKKVQDELESYRNFYDLGE 60
            MDGVLPTEE+MEEELL  THE K                 ELKKVQDEL+SYRNFYDLGE
Sbjct: 940  MDGVLPTEEFMEEELLSLTHEHKILKEKYENHPEVLQNRIELKKVQDELQSYRNFYDLGE 999

Query: 61   REVLMEEIQDLRSRQQYYIDSPSTS 69
            REVLMEEIQDLRS+ QYYIDSPS S
Sbjct: 1000 REVLMEEIQDLRSQLQYYIDSPSAS 1024

[Close]
BLAST of Csa1G186650 vs. NCBI nr
Match: gi|778679262|ref|XP_011651111.1| (PREDICTED: kinesin-like protein KIN12B [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 3.1e-22
Identity = 60/85 (70.59%), Postives = 63/85 (74.12%), Query Frame = 1 

Query: 1    MDGVLPTEEYMEEELLFFTHERK-----------------ELKKVQDELESYRNFYDLGE 60
            MDGVLPTEE+MEEELL  THE K                 ELKKVQDEL+SYRNFYDLGE
Sbjct: 955  MDGVLPTEEFMEEELLSLTHEHKILKEKYENHPEVLQRRMELKKVQDELQSYRNFYDLGE 1014

Query: 61   REVLMEEIQDLRSRQQYYIDSPSTS 69
            REVLMEEIQDLRS+ QYYIDSPS S
Sbjct: 1015 REVLMEEIQDLRSQLQYYIDSPSAS 1039

[Close]
BLAST of Csa1G186650 vs. NCBI nr
Match: gi|1012364473|gb|KYP75655.1| (Kinesin-like protein KIF15 [Cajanus cajan])

HSP 1 Score: 100.9 bits (250), Expect = 9.3e-19
Identity = 54/86 (62.79%), Postives = 61/86 (70.93%), Query Frame = 1 

Query: 1   MDGVLPTEEYMEEELLFFTHERK-----------------ELKKVQDELESYRNFYDLGE 60
           MDGVLPTEE+MEEEL+  THE K                 ELK+VQDELE Y+NFY LGE
Sbjct: 866 MDGVLPTEEFMEEELVALTHEHKLLKDKYENHPEVLKMEIELKRVQDELEKYQNFYKLGE 925

Query: 61  REVLMEEIQDLRSRQQYYIDSPSTSS 70
           REVLMEEIQ LRS+ Q+YIDS STS+
Sbjct: 926 REVLMEEIQSLRSQLQFYIDSSSTSA 951

[Close]
BLAST of Csa1G186650 vs. NCBI nr
Match: gi|658004713|ref|XP_008337488.1| (PREDICTED: kinesin-like protein KIN12B [Malus domestica])

HSP 1 Score: 100.9 bits (250), Expect = 9.3e-19
Identity = 53/86 (61.63%), Postives = 62/86 (72.09%), Query Frame = 1 

Query: 1    MDGVLPTEEYMEEELLFFTHERK-----------------ELKKVQDELESYRNFYDLGE 60
            MDGVLPTEE+MEEEL+  THE K                 ELK+VQDELE+ RNF D+GE
Sbjct: 933  MDGVLPTEEFMEEELVSLTHEYKILKEKYENHPELLRTNIELKRVQDELENLRNFCDMGE 992

Query: 61   REVLMEEIQDLRSRQQYYIDSPSTSS 70
            REVL+EEIQDLRS+ QYY+D PSTS+
Sbjct: 993  REVLLEEIQDLRSQLQYYVDCPSTSA 1018

The following BLAST results are available for this feature:
BLAST of Csa1G186650 vs. Swiss-Prot
Match NameE-valueIdentityDescription
KN12B_ARATH1.3e-1245.98Kinesin-like protein KIN12B OS=Arabidopsis thaliana GN=KIN12B PE=1 SV=1[more]
KN12A_ARATH4.2e-1144.83Kinesin-like protein KIN12A OS=Arabidopsis thaliana GN=KIN12A PE=1 SV=1[more]
BLAST of Csa1G186650 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LT44_CUCSA5.6e-31100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G186650 PE=4 SV=1[more]
A0A0A0L899_CUCSA2.1e-2270.59Uncharacterized protein OS=Cucumis sativus GN=Csa_3G172990 PE=3 SV=1[more]
A0A151U8K1_CAJCA6.5e-1962.79Kinesin-like protein KIF15 OS=Cajanus cajan GN=KK1_019847 PE=3 SV=1[more]
A0A0B2QWN3_GLYSO8.4e-1961.63Kinesin-like protein KIF15 OS=Glycine soja GN=glysoja_025215 PE=3 SV=1[more]
I1MYC2_SOYBN8.4e-1961.63Uncharacterized protein OS=Glycine max GN=GLYMA_18G003800 PE=3 SV=2[more]
BLAST of Csa1G186650 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G23670.17.3e-1445.98 phragmoplast-associated kinesin-related protein, putative[more]
AT4G14150.12.3e-1244.83 phragmoplast-associated kinesin-related protein 1[more]
BLAST of Csa1G186650 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209964|gb|KGN65060.1|8.1e-31100.00hypothetical protein Csa_1G186650 [Cucumis sativus][more]
gi|659077156|ref|XP_008439062.1|3.1e-2270.59PREDICTED: kinesin-like protein KIN12B [Cucumis melo][more]
gi|778679262|ref|XP_011651111.1|3.1e-2270.59PREDICTED: kinesin-like protein KIN12B [Cucumis sativus][more]
gi|1012364473|gb|KYP75655.1|9.3e-1962.79Kinesin-like protein KIF15 [Cajanus cajan][more]
gi|658004713|ref|XP_008337488.1|9.3e-1961.63PREDICTED: kinesin-like protein KIN12B [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010544Kinesin-related conserved domain
IPR027640Kinesin-like_fam
Vocabulary: Molecular Function
TermDefinition
GO:0003777microtubule motor activity
Vocabulary: Biological Process
TermDefinition
GO:0007018microtubule-based movement
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007018 microtubule-based movement
cellular_component GO:0044430 cytoskeletal part
cellular_component GO:0005874 microtubule
molecular_function GO:0003777 microtubule motor activity
molecular_function GO:0000166 nucleotide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G186650.1Csa1G186650.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010544Kinesin-related conserved domainPFAMPF06548Kinesin-relatedcoord: 1..68
score: 9.8
IPR027640Kinesin-like proteinPANTHERPTHR24115FAMILY NOT NAMEDcoord: 1..64
score: 1.8
NoneNo IPR availablePANTHERPTHR24115:SF413KINESIN-LIKE PROTEIN KIN12A-RELATEDcoord: 1..64
score: 1.8