Csa1G171020 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G171020
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	F10K1.23
Location	Chr1 : 10616092 .. 10620163 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTGTTCATACTCTCTCTTTCTTTCGCGCCTCAGAAGCCGAAGGTTTGGTTTGGCTATTCACTCTCAACTCTTATCAAACTCATTTGATCCAATTTTCCATCCTTAATCTCCATTTATTATCACTTCTTACATTCTCTCTGATTCTTTACCGCTCAAGACTTCCACAGATTTGATGATTCTACTTTGCGAATTCTGGAATCATTTCCCGCTTCCAAAGACGCGACGTCGTTGATGGATGTTAATTCCAGCTTTAAAGAAGTTCTCAGATTTGAATCTCTATCTATCATTCGTGAAACCTCTGAGAAAACTGATGATCATAAGCTTCTAGTCATCGAATTTCTTGTTCGAGCTTTTGCCCTTGTTGGAGACATTGAGGTGATTATTTATTTACATAACTCTCTCTGATCGTTTTTTGTATCTGTGACCCTTCAGTTTTTCTTCTGTAATCGTTTATGAATTTCCTAGTTTTGGTGTCTGTACTCTATGCTAAACGATGAATTTGTTAGCAGATGTGAATGTTTCTCTATTGTTCTACTTATACTTTCATGCTTCTAGAGTTGCTTAGCTTTGAGATACGAGGCCTTGAATTTTCGGGTACTGAAGTCTTTCAATCAACCATGGCTTCAAGTATCACACGCAGAATGGTTAAACTTCGCTGAGCATTCATTGCATGCTGGCTTTTTTTCAATTTCCATAAAGGTAAGGTGATTTCTTTTATTTATGTAATTGCTTAAGATTTTTCTTTAACACTTCGGTATAGGATTCTGTCCAATAAAAGTTCTACATATTATGTCCTTCCAACCACTTATGTATCTACTAATTATGAGGATGTGAGATATGAAGTGAAACCAAATGCTTAATAAAAATGCATTTATCTTTTTGGAAATTAAGAATGCATATGAAGTGGAGAAGTTGATGTTTGCAGTATGCTGGTGCTATGAATAGTAGTTCTATGAAAAGCCTCGTCTGAAGAATTCATTAACAAGGAAAAAATAACTCAGCATAAACAGTGGCTAAGTTTTGCTGGTGATATGCTTGTTGTGGCTAAGTTCATAAGGAAAAGCTTTGTCAGTGATGGTGCTATGCAAATTGTGGGTAGGTTTCAAGAAAGAGAAAAGATTCATATATGGCAAGTTATTAAGTAGAGAAAATGATGGGTAAGGAGAGCCTTTGTCAGAATGTCTGTGAGTTAGTTTTCACATGGTTTGAATTGAAGAATATGCTCATGAAGAACATTGAAGAACATGCATATTTAGTAAACGCGAACAGAAAGATTATAATGGCTTACCTAGACTCGATACACTAATGTGGTAAGATTTATGTTTGAATGAGCACTACTGGGACATAATTAGAACAAGAACAATGCCATTGCTGCCAATAATCTTTCTACCATCCGCACAACTAGCTCAGTTTACATCGATGCATGGTAGGAGAGACAGTGATTGGGCTACGAAGACAATAAGGTAAGGGGAACATTGAAACAGCGGGGAAATTTGTTGTAGGAGCATTGAGGAATCTATGAATTGGTAACAGAAAACTGAGGTTTGGTAGAGTAAGAGTCTAACGCAAGACCCTAGAAATGAGCATGTCTTGTTAGATCACTACTGAACCAAAAAACTTAAGTTTATGGATTATGGAAAATGTAATTATATCAATACTTTAATACTTCCCCTTGTTTGTGGGTGTAGAAATTTGTAGACAACTGGGCAAGGGGAAATCAATATTAATTGAAGTGAAAATGACGTTGTATGGTTTGGAACTTTGAACATAGGACCTCCTGCCTTTTTACTATGTGTTAGATTATTATTCACTCCAGGCCTATCAACTTTTAGTTCTGGAGATTATTATTCTTTTTTATCTCGTGTCTTATTCTCTTATTGCAGCTCTAATTTATAGTACTCAGTTACTTTTCTCCTTCAATACAATGAAATTATGGTGAAGATTTAATTAGTCTCAATACGTATGACTTATTTACAGTTTTCTTTGGTAGGCATATGAGCAAGCGCTGTCAAGCCTTCAGCAGAGTGATACTGCAAACTACACATCACATGGTTCCTTTAAACGCACAGAAGTTATGGAGAAGATAAATAGACTCAAAGATCATGCTCTGAATTTAGCTGGTTCCCATTCTGGTAGGAATCTTAGTCGAGTTAAAAGATTTGATGATCAATTCAATCACTAGATTAGCTGTATGCTTTGGGTTCTAATTTGTTTAAGAACTAACTGTTTCACTTTATATTGAAGGCATTGCATCTGTTGATGATTGACTTTCATGGATAAGATTTTTTACTTCAAACTTCGTGCTTTTTGAATCCCTTGTTGTATCTTAACCAAACATCCAGTGCTTCCATCATAATATTATTTTCAAACGACTTGTTATTCATAAGGAGAAAAAAGAAAATAACCAAATACCTTCTATTTCTATTACATAATTTTAATAACTAATAATTTGGAATGTAGACAATCTTTTAGTCCAAATACCATCTGACTCCTTGATCATTGTGTCTTATTAAATCAGTTCAAGCTCTCACATCTGATTATTTGAAAAAGAAAGTAACTGAAAGGAACAGAAAGATTTCTTCATCCTGCACAAGAAAATTTACAGCGAGCACTCTATTCATAAATGGTATCAGAAACTACAATGCAAGAAAGCTGCATGAATATCGAAGTTTTGAAGGGGTTAACCAGGGTCGCACAAGATCCAGTTTTGTGATCAGACCTACATGTAGTCTCTCTTCATATCCATCTGACTAGATAAATGTTCAGGTTAGTTTTACACGCATGGGTGCATGAGTAACTTTTCCTCTTATCAGTGTAGTATTTCTTTAAACTTTTATATTCATTATATAATTTTATAATAATAGTAACTAGCGGATTTGAACTTTGATGGCATAGAACCGTAATTCACTTAACTTGCGCTTTAGGAGTAGGGTTAAAGTTGATGCTATGCATTTGTTCTTTAATCAATGCCAAGAGGGGGCTAGACTTTATTACTCGAGTGATGTAAATGATTGGTGAGACTGAGTTAAGTAGGAAAGGGCTGAGTAGTTTGGCGAGAGAATGAGTCTAAATGATATTTCTTCTCTCAATAGGTCGAGATAACTATATCTAAGAGGCTCTATTGAACTCCCCATGACTGTTTTTTCCCACATTTTTTTTGTAAGAGAAGTTACAAGCTATTGCGTTAAATTTTTGCAGCTGCTGCATGAATAGATTAAGTGTATGTTTGGATTGACTTTCAAAGAATTGAAAAAAGTGTTTATAAGTGCAGAAAAAGTGTTTGTAAACACTTAAATATCAATCCAAATGCACCATAAGGCATTATTCAAAAACCCATTATTGGTTCCCCATGCTCAAAGTATAGTTGCGGTCGCTAACTCTTCCACCCTGAATTTAACCTTTTATATCATAGACTGGTTAATGCTATGCAGCTTAGAAGTATGGACAATTTTGTTTGACTAGTGTGCCATGTTCGGATGATGTGTGTGCATCTGCAGGTAGATTGTAAAAGCAAAAGTACTTTTGGTATCAAATTGTGATTACCTAACGATTTCTCTTGTGCTAGATAAGTTTTTCATTTTATTTTCTTTATAAATTTGACTGGGATTGAGTCGATGTGGTTCATTGAAGCTTTTAATGTTTATTTTCTTCCTGTTATTTGACGCTTCTGAATTTGTGTGCTTCCTTTAGGCAATAGGTTAGTACTGGACAGTTTATCAAGAAGACCAACTTAACTCTGACTGCTGCAAACTTATTCTTTCTATTACAGGGAGTCGATCAGGGTGACTCGGGCGGCAAAAGAAAAAGTGTTTCTATATAATTCCAGTTGATCTCAGTTCTGTGCAAGTCCAAGTTGCTTCTCCCCGTCTGACAGGTTTGTATTATCAATACCCCACCCCACCCCAAATTCTTCATTTCTTCCTTTTTGTAAGAGTTCAATTTTTCAATACCACAAAATCTTTCATGTGGTAAAATCCACTTGGAGTTCACATGGAAGCCTGTAAATTCTTTCTCATTCCCTCTTTGAGACAAGAGAATGACGTGCTTATTTCATTTCCTTTTCATGC

mRNA sequence

ATGTTCTGTTCATACTCTCTCTTTCTTTCGCGCCTCAGAAGCCGAAGATTTGATGATTCTACTTTGCGAATTCTGGAATCATTTCCCGCTTCCAAAGACGCGACGTCGTTGATGGATGTTAATTCCAGCTTTAAAGAAGTTCTCAGATTTGAATCTCTATCTATCATTCGTGAAACCTCTGAGAAAACTGATGATCATAAGCTTCTAGTCATCGAATTTCTTGTTCGAGCTTTTGCCCTTGTTGGAGACATTGAGAGTTGCTTAGCTTTGAGATACGAGGCCTTGAATTTTCGGGTACTGAAGTCTTTCAATCAACCATGGCTTCAAGTATCACACGCAGAATGGTTAAACTTCGCTGAGCATTCATTGCATGCTGGCTTTTTTTCAATTTCCATAAAGGCATATGAGCAAGCGCTGTCAAGCCTTCAGCAGAGTGATACTGCAAACTACACATCACATGGTTCCTTTAAACGCACAGAAGTTATGGAGAAGATAAATAGACTCAAAGATCATGCTCTGAATTTAGCTGGTTCCCATTCTGTTCAAGCTCTCACATCTGATTATTTGAAAAAGAAAGTAACTGAAAGGAACAGAAAGATTTCTTCATCCTGCACAAGAAAATTTACAGCGAGCACTCTATTCATAAATGGTATCAGAAACTACAATGCAAGAAAGCTGCATGAATATCGAAGTTTTGAAGGGGTTAACCAGGGTCGCACAAGATCCAGTTTTGTGATCAGACCTACATGTAGTCTCTCTTCATATCCATCTGACTAG

Coding sequence (CDS)

ATGTTCTGTTCATACTCTCTCTTTCTTTCGCGCCTCAGAAGCCGAAGATTTGATGATTCTACTTTGCGAATTCTGGAATCATTTCCCGCTTCCAAAGACGCGACGTCGTTGATGGATGTTAATTCCAGCTTTAAAGAAGTTCTCAGATTTGAATCTCTATCTATCATTCGTGAAACCTCTGAGAAAACTGATGATCATAAGCTTCTAGTCATCGAATTTCTTGTTCGAGCTTTTGCCCTTGTTGGAGACATTGAGAGTTGCTTAGCTTTGAGATACGAGGCCTTGAATTTTCGGGTACTGAAGTCTTTCAATCAACCATGGCTTCAAGTATCACACGCAGAATGGTTAAACTTCGCTGAGCATTCATTGCATGCTGGCTTTTTTTCAATTTCCATAAAGGCATATGAGCAAGCGCTGTCAAGCCTTCAGCAGAGTGATACTGCAAACTACACATCACATGGTTCCTTTAAACGCACAGAAGTTATGGAGAAGATAAATAGACTCAAAGATCATGCTCTGAATTTAGCTGGTTCCCATTCTGTTCAAGCTCTCACATCTGATTATTTGAAAAAGAAAGTAACTGAAAGGAACAGAAAGATTTCTTCATCCTGCACAAGAAAATTTACAGCGAGCACTCTATTCATAAATGGTATCAGAAACTACAATGCAAGAAAGCTGCATGAATATCGAAGTTTTGAAGGGGTTAACCAGGGTCGCACAAGATCCAGTTTTGTGATCAGACCTACATGTAGTCTCTCTTCATATCCATCTGACTAG

Protein sequence

MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETSEKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAEHSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHSVQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGRTRSSFVIRPTCSLSSYPSD*

Homology

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BLAST of Csa1G171020 vs. TrEMBL
Match: A0A0A0LSV1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G171020 PE=4 SV=1)

HSP 1 Score: 507.7 bits (1306), Expect = 8.5e-141
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 1


Query: 1   MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS 60
           MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS
Sbjct: 1   MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS 60

Query: 61  EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120
           EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE
Sbjct: 61  EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120

Query: 121 HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS 180
           HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS
Sbjct: 121 HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS 180

Query: 181 VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGRT 240
           VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGRT
Sbjct: 181 VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGRT 240

Query: 241 RSSFVIRPTCSLSSYPSD 259
           RSSFVIRPTCSLSSYPSD
Sbjct: 241 RSSFVIRPTCSLSSYPSD 258

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BLAST of Csa1G171020 vs. TrEMBL
Match: F6GUL6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g07190 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 7.1e-55
Identity = 119/229 (51.97%), Postives = 157/229 (68.56%), Query Frame = 1


Query: 5   YSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETSEKTD 64
           +SLF S+++SRRFDD TLRILES   SKD  S ++V SS +E +R ESLS+IRE +EK  
Sbjct: 23  FSLFRSQIKSRRFDDGTLRILESVLVSKDVRSFLEVRSSLREFMRSESLSVIREIAEKNV 82

Query: 65  DHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAEHSLH 124
           +HK+L+++F VRAFAL GD+ESCLALRYEAL  R LKS +  WLQVSH EWL FAE +L 
Sbjct: 83  EHKILILDFFVRAFALAGDVESCLALRYEALVLRELKSTSYQWLQVSHIEWLTFAEQALD 142

Query: 125 AGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHSVQAL 184
            GF+S++ KA E AL SLQ +D A + +       +++EKI RLKD AL    S SVQA 
Sbjct: 143 NGFYSVAAKACENALLSLQMNDIAEHRADELSGNVQIIEKIKRLKDVALASVVSLSVQAQ 202

Query: 185 TSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFE 234
            +++LKKK  +  +    +      ASTLF +GI+  NARKL E++  +
Sbjct: 203 ATEHLKKKNQKSKKNFLFNKGAHCLASTLFTSGIKKQNARKLLEHQRLQ 251

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BLAST of Csa1G171020 vs. TrEMBL
Match: A0A061GYP1_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_042211 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.5e-49
Identity = 116/245 (47.35%), Postives = 156/245 (63.67%), Query Frame = 1


Query: 6   SLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETSEKTDD 65
           SLF S++ +++F+D +LRIL+S   SKD  SL+   S+  E +R ESLS+IR+ + KT D
Sbjct: 11  SLFRSQIENKKFNDDSLRILKSLLVSKDVKSLIQTRSNLIEFIRSESLSVIRQIAAKTVD 70

Query: 66  HKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAEHSLHA 125
            +L V+EF VRAFA++GDIESCLALRYEAL  R  KS  Q WLQVSH EWLNFAE SL  
Sbjct: 71  QQLFVLEFFVRAFAIIGDIESCLALRYEALVLRDHKSEIQKWLQVSHLEWLNFAEQSLEN 130

Query: 126 GFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS----- 185
           GF ++++KA + ALS L+ +D A   +  S +  +V EKIN+LK+ AL LA S S     
Sbjct: 131 GFHAVAVKACDYALSCLEGNDVAESKTDESLENLQVTEKINKLKNSALTLAASGSGMSHV 190

Query: 186 ------------------VQALTSDYLKKKVTERNRKISSSCTR-KFTASTLFINGIRNY 227
                             VQA T++YL+KK +ER+      C + +F AS L+ NGI+ +
Sbjct: 191 YFLHHTTKAWGSLRLFITVQAQTAEYLRKKTSERSNPQPPICKKPRFAASVLYRNGIKKH 250

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BLAST of Csa1G171020 vs. TrEMBL
Match: V4SHS2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029273mg PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.0e-45
Identity = 101/208 (48.56%), Postives = 141/208 (67.79%), Query Frame = 1


Query: 38  MDVNSSFKEVLRFESLSIIRETSEKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNF 97
           M+V +  +E LR ES+S+IRE  ++T + KLL++EF +R+FAL+GDIESCLALRYEA   
Sbjct: 1   MEVRAGLREYLRSESISVIREIGDETVEKKLLILEFFIRSFALIGDIESCLALRYEAFVL 60

Query: 98  RVLKSFNQPWLQVSHAEWLNFAEHSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFK 157
           R LKS +  WL+VSH EW++FA  SL  GF++++ KA E A S LQ+ + A+  +   F+
Sbjct: 61  RDLKSASCKWLRVSHTEWISFAGQSLENGFYAVAAKACENAQSCLQRDNVADSKTGEIFE 120

Query: 158 RTEVMEKINRLKDHALNLAGSHSVQALTSDYLKKKVTERNRKISSSCTR-KFTASTLFIN 217
             ++++KI  LKD AL  AGS SVQA  ++YLKKK  E+ + +SS     K  A+TLF N
Sbjct: 121 YMQMLKKIKSLKDFALTKAGSRSVQAQAAEYLKKKTVEKGKLLSSHHKETKCPATTLFRN 180

Query: 218 GIRNYNARKLHEYRSFEGVNQGRTRSSF 245
           GI+  N RKLHE +SF+ V  G   + F
Sbjct: 181 GIKRRNIRKLHELQSFQQVTGGSNSTQF 208

[Close]

BLAST of Csa1G171020 vs. TrEMBL
Match: A0A068ULD3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00028483001 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.3e-45
Identity = 104/226 (46.02%), Postives = 148/226 (65.49%), Query Frame = 1


Query: 6   SLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETSEKTDD 65
           SLF +++++R F D T+ ILES  ASKD  S +++ S+ KE +R ESLSIIRE +EK+ +
Sbjct: 10  SLFSTQMQNRIFGDGTIAILESLLASKDVKSSLEIRSALKEFMRHESLSIIREITEKSVE 69

Query: 66  HKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAEHSLHA 125
           +KLL+ +FL+RAFAL+GD+ESCLALRYEAL  R  K+ +   L+VS+ EWL  AE     
Sbjct: 70  NKLLIADFLIRAFALIGDVESCLALRYEALLLRDEKACSDTRLEVSYHEWLTLAEQLFDN 129

Query: 126 GFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHSVQALT 185
           GF+S + K  E+AL  +Q  +         F      E I RLKD A+ LA S +VQ   
Sbjct: 130 GFYSAATKTCERALLCIQMDNGICTEDDDCFNCEHAFENIKRLKDAAIILAASQTVQVQA 189

Query: 186 SDYLKKKVTERNRKISSSCTRKFTA-STLFINGIRNYNARKLHEYR 231
           S+Y+KKK+ ++ ++  S CT  +++ STLF NGI+  N RKL E++
Sbjct: 190 SEYMKKKINQQLKQQESICTETYSSGSTLFRNGIKRRNLRKLQEHQ 235

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BLAST of Csa1G171020 vs. TAIR10
Match: AT1G07060.1 (AT1G07060.1 unknown protein)

HSP 1 Score: 143.3 bits (360), Expect = 2.1e-34
Identity = 79/174 (45.40%), Postives = 109/174 (62.64%), Query Frame = 1


Query: 7   LFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETSEKTDDH 66
           LF++R++ RRFD+ +LRILE    + +  S ++V S  ++ +R ES+ I  E + ++   
Sbjct: 38  LFINRVQDRRFDEESLRILELSLVAMNVKSFLEVRSRLRDFMRSESVVIFGELTGESMVA 97

Query: 67  KLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAEHSLHAG 126
           KL V+EF  RAFAL+GD+ESCLA+RYEALN R LKS +  WL VSH+EW  FA  S+  G
Sbjct: 98  KLSVLEFFARAFALLGDMESCLAMRYEALNLRQLKSPSCLWLGVSHSEWTKFAVQSMENG 157

Query: 127 FFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS 181
           F SI+ KA E AL SL++       S  +    +  EK+ RL+D A +L  SHS
Sbjct: 158 FPSIAGKASENALLSLKKDSLIEPKSEDNSDILDAAEKVRRLRDSAASLTSSHS 211

[Close]

BLAST of Csa1G171020 vs. NCBI nr
Match: gi|778659583|ref|XP_004139510.2| (PREDICTED: uncharacterized protein LOC101211584 isoform X1 [Cucumis sativus])

HSP 1 Score: 507.7 bits (1306), Expect = 1.2e-140
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 1


Query: 1   MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS 60
           MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS
Sbjct: 1   MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS 60

Query: 61  EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120
           EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE
Sbjct: 61  EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120

Query: 121 HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS 180
           HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS
Sbjct: 121 HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS 180

Query: 181 VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGRT 240
           VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGRT
Sbjct: 181 VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGRT 240

Query: 241 RSSFVIRPTCSLSSYPSD 259
           RSSFVIRPTCSLSSYPSD
Sbjct: 241 RSSFVIRPTCSLSSYPSD 258

[Close]

BLAST of Csa1G171020 vs. NCBI nr
Match: gi|778659587|ref|XP_011654706.1| (PREDICTED: uncharacterized protein LOC101211584 isoform X2 [Cucumis sativus])

HSP 1 Score: 437.2 bits (1123), Expect = 2.0e-119
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1


Query: 38  MDVNSSFKEVLRFESLSIIRETSEKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNF 97
           MDVNSSFKEVLRFESLSIIRETSEKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNF
Sbjct: 1   MDVNSSFKEVLRFESLSIIRETSEKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNF 60

Query: 98  RVLKSFNQPWLQVSHAEWLNFAEHSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFK 157
           RVLKSFNQPWLQVSHAEWLNFAEHSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFK
Sbjct: 61  RVLKSFNQPWLQVSHAEWLNFAEHSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFK 120

Query: 158 RTEVMEKINRLKDHALNLAGSHSVQALTSDYLKKKVTERNRKISSSCTRKFTASTLFING 217
           RTEVMEKINRLKDHALNLAGSHSVQALTSDYLKKKVTERNRKISSSCTRKFTASTLFING
Sbjct: 121 RTEVMEKINRLKDHALNLAGSHSVQALTSDYLKKKVTERNRKISSSCTRKFTASTLFING 180

Query: 218 IRNYNARKLHEYRSFEGVNQGRTRSSFVIRPTCSLSSYPSD 259
           IRNYNARKLHEYRSFEGVNQGRTRSSFVIRPTCSLSSYPSD
Sbjct: 181 IRNYNARKLHEYRSFEGVNQGRTRSSFVIRPTCSLSSYPSD 221

[Close]

BLAST of Csa1G171020 vs. NCBI nr
Match: gi|659128621|ref|XP_008464290.1| (PREDICTED: uncharacterized protein LOC103502216 isoform X1 [Cucumis melo])

HSP 1 Score: 436.0 bits (1120), Expect = 4.5e-119
Identity = 222/237 (93.67%), Postives = 228/237 (96.20%), Query Frame = 1


Query: 1   MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS 60
           MFCSYSLFLSRLRSRRFDDSTLRILE FPASKDATSL DV SSF E+LRFESLSIIRET+
Sbjct: 1   MFCSYSLFLSRLRSRRFDDSTLRILELFPASKDATSLADVKSSFSELLRFESLSIIRETA 60

Query: 61  EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120
           EKTDD KLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE
Sbjct: 61  EKTDDQKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120

Query: 121 HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS 180
           HSLHAGFFSI+IKAYEQALSSLQQSDTANYTSHGSFK TEV+EKINRLKDHALNL+GSHS
Sbjct: 121 HSLHAGFFSIAIKAYEQALSSLQQSDTANYTSHGSFKHTEVIEKINRLKDHALNLSGSHS 180

Query: 181 VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQ 238
           VQALTSDYLKKKVTER+RKISSSCTRKFTASTLF NGIRNYNARKLHEYRS  GVNQ
Sbjct: 181 VQALTSDYLKKKVTERSRKISSSCTRKFTASTLFRNGIRNYNARKLHEYRSIGGVNQ 237

[Close]

BLAST of Csa1G171020 vs. NCBI nr
Match: gi|659128627|ref|XP_008464293.1| (PREDICTED: uncharacterized protein LOC103502216 isoform X2 [Cucumis melo])

HSP 1 Score: 267.3 bits (682), Expect = 2.8e-68
Identity = 156/237 (65.82%), Postives = 167/237 (70.46%), Query Frame = 1


Query: 1   MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS 60
           MFCSYSLFLSRLRSRRFDDSTLRILE FPASKDATSL DV SSF E+LRFESLSIIRET+
Sbjct: 1   MFCSYSLFLSRLRSRRFDDSTLRILELFPASKDATSLADVKSSFSELLRFESLSIIRETA 60

Query: 61  EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120
           EKTDD KLLVIEFLVRAFALVGDIE+     YE    + L S  Q           + A 
Sbjct: 61  EKTDDQKLLVIEFLVRAFALVGDIEA-----YE----QALSSLQQS----------DTAN 120

Query: 121 HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS 180
           ++ H  F    +                             +EKINRLKDHALNL+GSHS
Sbjct: 121 YTSHGSFKHTEV-----------------------------IEKINRLKDHALNLSGSHS 180

Query: 181 VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQ 238
           VQALTSDYLKKKVTER+RKISSSCTRKFTASTLF NGIRNYNARKLHEYRS  GVNQ
Sbjct: 181 VQALTSDYLKKKVTERSRKISSSCTRKFTASTLFRNGIRNYNARKLHEYRSIGGVNQ 189

[Close]

BLAST of Csa1G171020 vs. NCBI nr
Match: gi|731391723|ref|XP_010650859.1| (PREDICTED: uncharacterized protein LOC100246769 [Vitis vinifera])

HSP 1 Score: 222.2 bits (565), Expect = 1.0e-54
Identity = 119/229 (51.97%), Postives = 157/229 (68.56%), Query Frame = 1


Query: 5   YSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETSEKTD 64
           +SLF S+++SRRFDD TLRILES   SKD  S ++V SS +E +R ESLS+IRE +EK  
Sbjct: 23  FSLFRSQIKSRRFDDGTLRILESVLVSKDVRSFLEVRSSLREFMRSESLSVIREIAEKNV 82

Query: 65  DHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAEHSLH 124
           +HK+L+++F VRAFAL GD+ESCLALRYEAL  R LKS +  WLQVSH EWL FAE +L 
Sbjct: 83  EHKILILDFFVRAFALAGDVESCLALRYEALVLRELKSTSYQWLQVSHIEWLTFAEQALD 142

Query: 125 AGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHSVQAL 184
            GF+S++ KA E AL SLQ +D A + +       +++EKI RLKD AL    S SVQA 
Sbjct: 143 NGFYSVAAKACENALLSLQMNDIAEHRADELSGNVQIIEKIKRLKDVALASVVSLSVQAQ 202

Query: 185 TSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFE 234
            +++LKKK  +  +    +      ASTLF +GI+  NARKL E++  +
Sbjct: 203 ATEHLKKKNQKSKKNFLFNKGAHCLASTLFTSGIKKQNARKLLEHQRLQ 251

The following BLAST results are available for this feature:

BLAST of Csa1G171020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSV1_CUCSA	8.5e-141	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G171020 PE=4 SV=1	[more]
F6GUL6_VITVI	7.1e-55	51.97	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g07190 PE=4 SV=...	[more]
A0A061GYP1_THECC	1.5e-49	47.35	Uncharacterized protein OS=Theobroma cacao GN=TCM_042211 PE=4 SV=1	[more]
V4SHS2_9ROSI	1.0e-45	48.56	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029273mg PE=4 SV=1	[more]
A0A068ULD3_COFCA	1.3e-45	46.02	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00028483001 PE=4 SV=1	[more]

BLAST of Csa1G171020 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G07060.1	2.1e-34	45.40	unknown protein	[more]

BLAST of Csa1G171020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778659583\|ref\|XP_004139510.2\|	1.2e-140	100.00	PREDICTED: uncharacterized protein LOC101211584 isoform X1 [Cucumis sativus]	[more]
gi\|778659587\|ref\|XP_011654706.1\|	2.0e-119	100.00	PREDICTED: uncharacterized protein LOC101211584 isoform X2 [Cucumis sativus]	[more]
gi\|659128621\|ref\|XP_008464290.1\|	4.5e-119	93.67	PREDICTED: uncharacterized protein LOC103502216 isoform X1 [Cucumis melo]	[more]
gi\|659128627\|ref\|XP_008464293.1\|	2.8e-68	65.82	PREDICTED: uncharacterized protein LOC103502216 isoform X2 [Cucumis melo]	[more]
gi\|731391723\|ref\|XP_010650859.1\|	1.0e-54	51.97	PREDICTED: uncharacterized protein LOC100246769 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G171020.1	Csa1G171020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37176	FAMILY NOT NAMED	coord: 6..241 score: 6.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G171020	MELO3C026086	Melon (DHL92) v3.5.1	cumeB004
Csa1G171020	MELO3C026086.2	Melon (DHL92) v3.6.1	cumedB016
Csa1G171020	CSPI01G15200	Wild cucumber (PI 183967)	cpicuB000
Csa1G171020	Cucsa.319510	Cucumber (Gy14) v1	cgycuB457
Csa1G171020	CsGy1G014970	Cucumber (Gy14) v2	cgybcuB001

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G171020	Watermelon (97103) v2	cuwmbB009
Csa1G171020	Wax gourd	cuwgoB036
Csa1G171020	Cucurbita maxima (Rimu)	cmacuB210
Csa1G171020	Cucurbita maxima (Rimu)	cmacuB222
Csa1G171020	Cucurbita maxima (Rimu)	cmacuB399
Csa1G171020	Cucurbita moschata (Rifu)	cmocuB206
Csa1G171020	Cucurbita moschata (Rifu)	cmocuB392
Csa1G171020	Melon (DHL92) v3.5.1	cumeB015
Csa1G171020	Watermelon (Charleston Gray)	cuwcgB022
Csa1G171020	Watermelon (97103) v1	cuwmB042
Csa1G171020	Cucurbita pepo (Zucchini)	cpecuB020
Csa1G171020	Cucurbita pepo (Zucchini)	cpecuB056
Csa1G171020	Cucurbita pepo (Zucchini)	cpecuB512
Csa1G171020	Bottle gourd (USVL1VR-Ls)	culsiB032
Csa1G171020	Melon (DHL92) v3.6.1	cumedB010