Csa1G169950 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G169950
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Pentatricopeptide repeat-containing protein; contains IPR002885 (Pentatricopeptide repeat), IPR011990 (Tetratricopeptide-like helical)
Location	Chr1 : 10543834 .. 10545640 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCATAAAAATCGAAACGGTTCTTAGAACGATGAGCAGCATTCCTTCCCACACAGCCACTCCTTCTCAACTCCAACTACCTCCTTTTACACCTTCTTCAATCCCACTTTCAAATCCAACAAAACTCAACTTCCCTCGCTCTCCCAACTCCCCTCATCGCAATATCTCCTCCAAATTCAACCCCAATTCTGTTGACCCCATTGTTCTATGGACCTCTTCTCTTGCTCGCTACTGCCGCAACGGCCAATTATCCGAAGCCGCTGCAGAGTTTACCCGCATGCGACTCGCCGGAGTTGAGCCCAACCATATCACATTTATTACGCTTCTCTCCGCCTGTGCTGATTTTCCGTCAGAAAGCTTCTTCTTCGCCTCTTCACTTCATGGCTACGCTTGTAAATATGGTCTGGATACTGGGCATGTAATGGTGGGGACTGCTCTCATTGATATGTATTCCAAATGTGCTCAATTGGGTCATGCTAGGAAGGTTTTTTATAACCTGGGTGTGAAAAACTCTGTCTCTTGGAACACTATGCTCAATGGTTTTATGAGGAATGGAGAGATTGAGTTGGCCATTCAACTGTTTGATGAAATGCCTACAAGAGATGCGATTTCTTGGACGGCTTTAATTAACGGTCTTTTGAAACATGGTTACTCGGAACAAGCATTGGAGTGCTTCCATCAGATGCAACGCTCGGGTGTCGCTGCTGATTATGTGTCTATAATTGCTGTTCTTGCTGCCTGTGCTGATTTGGGTGCTCTTACTTTGGGGTTGTGGGTTCATCGTTTTGTTATGCCGCAGGAGTTTAAGGATAATATTAAGATTAGTAATTCCTTGATAGATATGTATTCTAGATGTGGATGTATTGAGTTTGCCCGCCAAGTGTTTGTGAAAATGGCCAAACGAACTTTGGTATCTTGGAACTCTATCATTGTGGGGTTTGCAGTTAACGGATTTGCAGATGAATCTTTAGAGTTTTTTTATGCGATGCAGAAGGAAGGATTCAAGCCAGATGGAGTAAGCTACACGGGGGCTCTTACCGCGTGTAGCCATGCTGGCTTAGTGAATAAGGGCCTGGAATTGTTTGATAACATGAAGAGTGTACACAAAATTACTCCTAGGATTGAGCATTATGGATGTATTGTCGATCTCTACGGTCGTGCTGGAAGGTTAGAGGATGCACTGAATATGATTGAGGAAATGCCGATGAAGCCGAATGAAGTTGTGTTGGGGTCGTTGCTTGCTGCTTGCAGGACTCATGGTGATGTGAACCTGGCTGAAAGGTTAATGAAACATCTCTTTAAGTTAGATCCAGAAGGCGATGCATATTATGTGCTCCTTTCAAACATATATGCAGCAATTGGGAAGTGGGATGGTGCTAACAATGTTAGGAGAACGATGAAAGCCCGAGGTGTGCAAAAAAAACCGGGTTATAGTTCTGTTGAAATTGATGGTAAGGTTCATGAATTTGTTGCAGGTGACAATTACCATGCTGATGCAGACAATATTTACTCAATGTTAGATTTGTTGTGTCATGAACTAAAGGTGTGTGGATATGTTCCTGGTAGTGATACCATTCTGAATACCAAAGAATCTAATAAGGACGATTGAAGCTTCTTTTGTGCTGTTAAAACCCTTATTTGATTCGTCCGTCTATGGCTTAGATCAACAGCAGTTTGAGAGTTTGTGAAATAGACAAGGTAAATGGATGCTTAAGTTAAGCGGGCTGCAAGATATATAATTTAATTTGCATTTGTCGTCACATTTGAAAATGGAAGCAAAACACTTAGTTCAAGGTACAAATAAAAGG

mRNA sequence

ATGAGCAGCATTCCTTCCCACACAGCCACTCCTTCTCAACTCCAACTACCTCCTTTTACACCTTCTTCAATCCCACTTTCAAATCCAACAAAACTCAACTTCCCTCGCTCTCCCAACTCCCCTCATCGCAATATCTCCTCCAAATTCAACCCCAATTCTGTTGACCCCATTGTTCTATGGACCTCTTCTCTTGCTCGCTACTGCCGCAACGGCCAATTATCCGAAGCCGCTGCAGAGTTTACCCGCATGCGACTCGCCGGAGTTGAGCCCAACCATATCACATTTATTACGCTTCTCTCCGCCTGTGCTGATTTTCCGTCAGAAAGCTTCTTCTTCGCCTCTTCACTTCATGGCTACGCTTGTAAATATGGTCTGGATACTGGGCATGTAATGGTGGGGACTGCTCTCATTGATATGTATTCCAAATGTGCTCAATTGGGTCATGCTAGGAAGGTTTTTTATAACCTGGGTGTGAAAAACTCTGTCTCTTGGAACACTATGCTCAATGGTTTTATGAGGAATGGAGAGATTGAGTTGGCCATTCAACTGTTTGATGAAATGCCTACAAGAGATGCGATTTCTTGGACGGCTTTAATTAACGGTCTTTTGAAACATGGTTACTCGGAACAAGCATTGGAGTGCTTCCATCAGATGCAACGCTCGGGTGTCGCTGCTGATTATGTGTCTATAATTGCTGTTCTTGCTGCCTGTGCTGATTTGGGTGCTCTTACTTTGGGGTTGTGGGTTCATCGTTTTGTTATGCCGCAGGAGTTTAAGGATAATATTAAGATTAGTAATTCCTTGATAGATATGTATTCTAGATGTGGATGTATTGAGTTTGCCCGCCAAGTGTTTGTGAAAATGGCCAAACGAACTTTGGTATCTTGGAACTCTATCATTGTGGGGTTTGCAGTTAACGGATTTGCAGATGAATCTTTAGAGTTTTTTTATGCGATGCAGAAGGAAGGATTCAAGCCAGATGGAGTAAGCTACACGGGGGCTCTTACCGCGTGTAGCCATGCTGGCTTAGTGAATAAGGGCCTGGAATTGTTTGATAACATGAAGAGTGTACACAAAATTACTCCTAGGATTGAGCATTATGGATGTATTGTCGATCTCTACGGTCGTGCTGGAAGGTTAGAGGATGCACTGAATATGATTGAGGAAATGCCGATGAAGCCGAATGAAGTTGTGTTGGGGTCGTTGCTTGCTGCTTGCAGGACTCATGGTGATGTGAACCTGGCTGAAAGGTTAATGAAACATCTCTTTAAGTTAGATCCAGAAGGCGATGCATATTATGTGCTCCTTTCAAACATATATGCAGCAATTGGGAAGTGGGATGGTGCTAACAATGTTAGGAGAACGATGAAAGCCCGAGGTGTGCAAAAAAAACCGGGTTATAGTTCTGTTGAAATTGATGGTAAGGTTCATGAATTTGTTGCAGGTGACAATTACCATGCTGATGCAGACAATATTTACTCAATGTTAGATTTGTTGTGTCATGAACTAAAGGTGTGTGGATATGTTCCTGGTAGTGATACCATTCTGAATACCAAAGAATCTAATAAGGACGATTGA

Coding sequence (CDS)

ATGAGCAGCATTCCTTCCCACACAGCCACTCCTTCTCAACTCCAACTACCTCCTTTTACACCTTCTTCAATCCCACTTTCAAATCCAACAAAACTCAACTTCCCTCGCTCTCCCAACTCCCCTCATCGCAATATCTCCTCCAAATTCAACCCCAATTCTGTTGACCCCATTGTTCTATGGACCTCTTCTCTTGCTCGCTACTGCCGCAACGGCCAATTATCCGAAGCCGCTGCAGAGTTTACCCGCATGCGACTCGCCGGAGTTGAGCCCAACCATATCACATTTATTACGCTTCTCTCCGCCTGTGCTGATTTTCCGTCAGAAAGCTTCTTCTTCGCCTCTTCACTTCATGGCTACGCTTGTAAATATGGTCTGGATACTGGGCATGTAATGGTGGGGACTGCTCTCATTGATATGTATTCCAAATGTGCTCAATTGGGTCATGCTAGGAAGGTTTTTTATAACCTGGGTGTGAAAAACTCTGTCTCTTGGAACACTATGCTCAATGGTTTTATGAGGAATGGAGAGATTGAGTTGGCCATTCAACTGTTTGATGAAATGCCTACAAGAGATGCGATTTCTTGGACGGCTTTAATTAACGGTCTTTTGAAACATGGTTACTCGGAACAAGCATTGGAGTGCTTCCATCAGATGCAACGCTCGGGTGTCGCTGCTGATTATGTGTCTATAATTGCTGTTCTTGCTGCCTGTGCTGATTTGGGTGCTCTTACTTTGGGGTTGTGGGTTCATCGTTTTGTTATGCCGCAGGAGTTTAAGGATAATATTAAGATTAGTAATTCCTTGATAGATATGTATTCTAGATGTGGATGTATTGAGTTTGCCCGCCAAGTGTTTGTGAAAATGGCCAAACGAACTTTGGTATCTTGGAACTCTATCATTGTGGGGTTTGCAGTTAACGGATTTGCAGATGAATCTTTAGAGTTTTTTTATGCGATGCAGAAGGAAGGATTCAAGCCAGATGGAGTAAGCTACACGGGGGCTCTTACCGCGTGTAGCCATGCTGGCTTAGTGAATAAGGGCCTGGAATTGTTTGATAACATGAAGAGTGTACACAAAATTACTCCTAGGATTGAGCATTATGGATGTATTGTCGATCTCTACGGTCGTGCTGGAAGGTTAGAGGATGCACTGAATATGATTGAGGAAATGCCGATGAAGCCGAATGAAGTTGTGTTGGGGTCGTTGCTTGCTGCTTGCAGGACTCATGGTGATGTGAACCTGGCTGAAAGGTTAATGAAACATCTCTTTAAGTTAGATCCAGAAGGCGATGCATATTATGTGCTCCTTTCAAACATATATGCAGCAATTGGGAAGTGGGATGGTGCTAACAATGTTAGGAGAACGATGAAAGCCCGAGGTGTGCAAAAAAAACCGGGTTATAGTTCTGTTGAAATTGATGGTAAGGTTCATGAATTTGTTGCAGGTGACAATTACCATGCTGATGCAGACAATATTTACTCAATGTTAGATTTGTTGTGTCATGAACTAAAGGTGTGTGGATATGTTCCTGGTAGTGATACCATTCTGAATACCAAAGAATCTAATAAGGACGATTGA

Protein sequence

MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFVAGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKDD*

Homology

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BLAST of Csa1G169950 vs. Swiss-Prot
Match: PPR13_ARATH (Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 1.9e-161
Identity = 277/463 (59.83%), Postives = 353/463 (76.24%), Query Frame = 1


Query: 48  KFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPS 107
           + N ++ +  V WTS +    RNG+L+EAA EF+ M LAGVEPNHITFI LLS C DF S
Sbjct: 27  RHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTS 86

Query: 108 ESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTM 167
            S      LHGYACK GLD  HVMVGTA+I MYSK  +   AR VF  +  KNSV+WNTM
Sbjct: 87  GSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTM 146

Query: 168 LNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADY 227
           ++G+MR+G+++ A ++FD+MP RD ISWTA+ING +K GY E+AL  F +MQ SGV  DY
Sbjct: 147 IDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDY 206

Query: 228 VSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVK 287
           V+IIA L AC +LGAL+ GLWVHR+V+ Q+FK+N+++SNSLID+Y RCGC+EFARQVF  
Sbjct: 207 VAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYN 266

Query: 288 MAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKG 347
           M KRT+VSWNS+IVGFA NG A ESL +F  MQ++GFKPD V++TGALTACSH GLV +G
Sbjct: 267 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326

Query: 348 LELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACR 407
           L  F  MK  ++I+PRIEHYGC+VDLY RAGRLEDAL +++ MPMKPNEVV+GSLLAAC 
Sbjct: 327 LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACS 386

Query: 408 THG-DVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPG 467
            HG ++ LAERLMKHL  L+ +  + YV+LSN+YAA GKW+GA+ +RR MK  G++K+PG
Sbjct: 387 NHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPG 446

Query: 468 YSSVEIDGKVHEFVAGDNYHADADNIYSMLDLLCHELKVCGYV 510
           +SS+EID  +H F+AGDN H +   I  +L+L+  +L++ G V
Sbjct: 447 FSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCV 489

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BLAST of Csa1G169950 vs. Swiss-Prot
Match: PP249_ARATH (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.2e-99
Identity = 183/477 (38.36%), Postives = 291/477 (61.01%), Query Frame = 1


Query: 49  FNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSE 108
           F+      + L  +  + Y R G   EA   F  M  +GV P+ I+ ++ +S+C+     
Sbjct: 294 FDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL--R 353

Query: 109 SFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTML 168
           +  +  S HGY  + G ++    +  ALIDMY KC +   A ++F  +  K  V+WN+++
Sbjct: 354 NILWGKSCHGYVLRNGFESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIV 413

Query: 169 NGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQ-RSGVAADY 228
            G++ NGE++ A + F+ MP ++ +SW  +I+GL++    E+A+E F  MQ + GV AD 
Sbjct: 414 AGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADG 473

Query: 229 VSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVK 288
           V+++++ +AC  LGAL L  W++ ++     + ++++  +L+DM+SRCG  E A  +F  
Sbjct: 474 VTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNS 533

Query: 289 MAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKG 348
           +  R + +W + I   A+ G A+ ++E F  M ++G KPDGV++ GALTACSH GLV +G
Sbjct: 534 LTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQG 593

Query: 349 LELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACR 408
            E+F +M  +H ++P   HYGC+VDL GRAG LE+A+ +IE+MPM+PN+V+  SLLAACR
Sbjct: 594 KEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACR 653

Query: 409 THGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGY 468
             G+V +A    + +  L PE    YVLLSN+YA+ G+W+    VR +MK +G++K PG 
Sbjct: 654 VQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGT 713

Query: 469 SSVEIDGKVHEFVAGDNYHADADNIYSMLDLLCHELKVCGYVPG-SDTILNTKESNK 524
           SS++I GK HEF +GD  H +  NI +MLD +       G+VP  S+ +++  E  K
Sbjct: 714 SSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEK 767

HSP 2 Score: 131.0 bits (328), Expect = 3.9e-29
Identity = 98/378 (25.93%), Postives = 167/378 (44.18%), Query Frame = 1


Query: 50  NPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSES 109
           N  S     ++ S +  Y  +G  +EA   F RM  +G+ P+  TF   LSACA   S +
Sbjct: 92  NSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAK--SRA 151

Query: 110 FFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLN 169
                 +HG   K G     + V  +L+  Y++C +L  ARKVF                
Sbjct: 152 KGNGIQIHGLIVKMGY-AKDLFVQNSLVHFYAECGELDSARKVF---------------- 211

Query: 170 GFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSG-VAADYV 229
                          DEM  R+ +SWT++I G  +  +++ A++ F +M R   V  + V
Sbjct: 212 ---------------DEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV 271

Query: 230 SIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKM 289
           +++ V++ACA L  L  G  V+ F+     + N  + ++L+DMY +C  I+ A+++F + 
Sbjct: 272 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 331

Query: 290 AKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACS--------- 349
               L   N++   +   G   E+L  F  M   G +PD +S   A+++CS         
Sbjct: 332 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 391

Query: 350 --HAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEV 409
             H  ++  G E +DN+               ++D+Y +  R + A  + + M  K   V
Sbjct: 392 SCHGYVLRNGFESWDNI------------CNALIDMYMKCHRQDTAFRIFDRMSNK-TVV 422

Query: 410 VLGSLLAACRTHGDVNLA 416
              S++A    +G+V+ A
Sbjct: 452 TWNSIVAGYVENGEVDAA 422

HSP 3 Score: 129.4 bits (324), Expect = 1.1e-28
Identity = 86/309 (27.83%), Postives = 145/309 (46.93%), Query Frame = 1


Query: 49  FNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRM-RLAGVEPNHITFITLLSACADFPS 108
           F+  S   +V WTS +  Y R     +A   F RM R   V PN +T + ++SACA    
Sbjct: 192 FDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKL-- 251

Query: 109 ESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTM 168
           E       ++ +    G++   +MV +AL+DMY KC  +  A+++F   G  N    N M
Sbjct: 252 EDLETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAM 311

Query: 169 LNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADY 228
            + ++R G                                + +AL  F+ M  SGV  D 
Sbjct: 312 ASNYVRQG-------------------------------LTREALGVFNLMMDSGVRPDR 371

Query: 229 VSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVK 288
           +S+++ +++C+ L  +  G   H +V+   F+    I N+LIDMY +C   + A ++F +
Sbjct: 372 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 431

Query: 289 MAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKG 348
           M+ +T+V+WNSI+ G+  NG  D + E F  M ++      VS+   ++      L  + 
Sbjct: 432 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFEEA 462

Query: 349 LELFDNMKS 357
           +E+F +M+S
Sbjct: 492 IEVFCSMQS 462

HSP 4 Score: 107.1 bits (266), Expect = 6.1e-22
Identity = 96/393 (24.43%), Postives = 171/393 (43.51%), Query Frame = 1


Query: 49  FNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRM-RLAGVEPNHITFITLLSACADFPS 108
           F+  S   +V WTS +  Y R     +A   F RM R   V PN +T + ++SACA    
Sbjct: 192 FDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKL-- 251

Query: 109 ESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTM 168
           E       ++ +    G++   +MV +AL+DMY KC  +  A+++F   G  N    N M
Sbjct: 252 EDLETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAM 311

Query: 169 LNGFMRNGEIELAIQLFDEMPTR----DAISWTALINGLLKHGYSEQALECFHQMQRSGV 228
            + ++R G    A+ +F+ M       D IS  + I+   +         C   + R+G 
Sbjct: 312 ASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNG- 371

Query: 229 AADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQ 288
              + S   +  A  D+            +  +     +   NS++  Y   G ++ A +
Sbjct: 372 ---FESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 431

Query: 289 VFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQ-KEGFKPDGVSYTGALTACSHAG 348
            F  M ++ +VSWN+II G       +E++E F +MQ +EG   DGV+     +AC H G
Sbjct: 432 TFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLG 491

Query: 349 LVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDAL---NMIEEMPMKPNEVVL 408
            ++    ++  ++  + I   +     +VD++ R G  E A+   N +    +      +
Sbjct: 492 ALDLAKWIYYYIEK-NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAI 551

Query: 409 GSLLAACRTHGDVNLAERLMKHLFKLDPEGDAY 433
           G++  A      + L + +++    L P+G A+
Sbjct: 552 GAMAMAGNAERAIELFDDMIEQ--GLKPDGVAF 574

[Close]

BLAST of Csa1G169950 vs. Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 5.8e-97
Identity = 171/468 (36.54%), Postives = 289/468 (61.75%), Query Frame = 1


Query: 57  IVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSL 116
           +V W S +  + + G   +A   F +M    V+ +H+T + +LSACA     +  F   +
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI--RNLEFGRQV 256

Query: 117 HGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGE 176
             Y  +  ++  ++ +  A++DMY+KC  +  A+++F  +  K++V+W TML+G+  + +
Sbjct: 257 CSYIEENRVNV-NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 316

Query: 177 IELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQ-RSGVAADYVSIIAVLA 236
            E A ++ + MP +D ++W ALI+   ++G   +AL  FH++Q +  +  + +++++ L+
Sbjct: 317 YEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLS 376

Query: 237 ACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVS 296
           ACA +GAL LG W+H ++     + N  ++++LI MYS+CG +E +R+VF  + KR +  
Sbjct: 377 ACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFV 436

Query: 297 WNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMK 356
           W+++I G A++G  +E+++ FY MQ+   KP+GV++T    ACSH GLV++   LF  M+
Sbjct: 437 WSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 496

Query: 357 SVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLA 416
           S + I P  +HY CIVD+ GR+G LE A+  IE MP+ P+  V G+LL AC+ H ++NLA
Sbjct: 497 SNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLA 556

Query: 417 ERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGK 476
           E     L +L+P  D  +VLLSNIYA +GKW+  + +R+ M+  G++K+PG SS+EIDG 
Sbjct: 557 EMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGM 616

Query: 477 VHEFVAGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNK 524
           +HEF++GDN H  ++ +Y  L  +  +LK  GY P    +L   E  +
Sbjct: 617 IHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEE 661

HSP 2 Score: 119.8 bits (299), Expect = 9.1e-26
Identity = 77/266 (28.95%), Postives = 132/266 (49.62%), Query Frame = 1


Query: 90  PNHITFITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHA 149
           PN  TF  L+ A A+  S S     SLHG A K  + +  V V  +LI  Y  C  L  A
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSL--GQSLHGMAVKSAVGSD-VFVANSLIHCYFSCGDLDSA 188

Query: 150 RKVFYNLGVKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSE 209
            KVF  +  K+ VSWN+M+NGF++ G  + A++LF +M + D                  
Sbjct: 189 CKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESED------------------ 248

Query: 210 QALECFHQMQRSGVAADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLI 269
                        V A +V+++ VL+ACA +  L  G  V  ++       N+ ++N+++
Sbjct: 249 -------------VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAML 308

Query: 270 DMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGV 329
           DMY++CG IE A+++F  M ++  V+W +++ G+A++   + + E   +M ++    D V
Sbjct: 309 DMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK----DIV 356

Query: 330 SYTGALTACSHAGLVNKGLELFDNMK 356
           ++   ++A    G  N+ L +F  ++
Sbjct: 369 AWNALISAYEQNGKPNEALIVFHELQ 356

HSP 3 Score: 114.0 bits (284), Expect = 5.0e-24
Identity = 93/329 (28.27%), Postives = 157/329 (47.72%), Query Frame = 1


Query: 90  PNHITFITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHA 149
           PN  TF  L+ A A+  S S     SLHG A K  + +  V V  +LI  Y  C  L  A
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSL--GQSLHGMAVKSAVGSD-VFVANSLIHCYFSCGDLDSA 188

Query: 150 RKVFYNLGVKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSE 209
            KVF  +  K+ VSWN+M+NGF++ G  + A++LF +M + D  +    + G+L      
Sbjct: 189 CKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI 248

Query: 210 QALECFHQMQRSGVAADYVSIIAVLA-ACADLGALTLGLW-VHRFVMPQEFKDNIKISNS 269
           + LE F +   S +  + V++   LA A  D+      +    R     E KDN+  + +
Sbjct: 249 RNLE-FGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWT-T 308

Query: 270 LIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQ-KEGFKP 329
           ++D Y+     E AR+V   M ++ +V+WN++I  +  NG  +E+L  F+ +Q ++  K 
Sbjct: 309 MLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKL 368

Query: 330 DGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNM 389
           + ++    L+AC+  G +  G  +   +K  H I         ++ +Y + G LE +  +
Sbjct: 369 NQITLVSTLSACAQVGALELGRWIHSYIKK-HGIRMNFHVTSALIHMYSKCGDLEKSREV 428

Query: 390 IEEMPMKPNEVVLGSLLAACRTHGDVNLA 416
              +  K +  V  +++     HG  N A
Sbjct: 429 FNSVE-KRDVFVWSAMIGGLAMHGCGNEA 450

HSP 4 Score: 100.1 bits (248), Expect = 7.4e-20
Identity = 59/220 (26.82%), Postives = 110/220 (50.00%), Query Frame = 1


Query: 177 IELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQM-QRSGVAADYVSIIAVLA 236
           +E A ++FDE+P  ++ +W  LI           ++  F  M   S    +  +   ++ 
Sbjct: 80  LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139

Query: 237 ACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVS 296
           A A++ +L+LG  +H   +      ++ ++NSLI  Y  CG ++ A +VF  + ++ +VS
Sbjct: 140 AAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVS 199

Query: 297 WNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMK 356
           WNS+I GF   G  D++LE F  M+ E  K   V+  G L+AC+    +  G ++   ++
Sbjct: 200 WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE 259

Query: 357 SVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPN 396
             +++   +     ++D+Y + G +EDA  + + M  K N
Sbjct: 260 E-NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN 298

[Close]

BLAST of Csa1G169950 vs. Swiss-Prot
Match: PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 4.1e-95
Identity = 178/454 (39.21%), Postives = 271/454 (59.69%), Query Frame = 1


Query: 57  IVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSL 116
           +V W S +  + +NG   EA   F  M  + VEP+ +T  +++SACA     +      +
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASL--SAIKVGQEV 277

Query: 117 HGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGE 176
           HG   K       +++  A +DMY+KC+++  AR +F ++ ++N ++  +M++G+     
Sbjct: 278 HGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAS 337

Query: 177 IELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAA 236
            + A  +F +M  R+ +SW ALI G  ++G +E+AL  F  ++R  V   + S   +L A
Sbjct: 338 TKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKA 397

Query: 237 CADLGALTLGLWVHRFVMPQEFK------DNIKISNSLIDMYSRCGCIEFARQVFVKMAK 296
           CADL  L LG+  H  V+   FK      D+I + NSLIDMY +CGC+E    VF KM +
Sbjct: 398 CADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMME 457

Query: 297 RTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLEL 356
           R  VSWN++I+GFA NG+ +E+LE F  M + G KPD ++  G L+AC HAG V +G   
Sbjct: 458 RDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHY 517

Query: 357 FDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHG 416
           F +M     + P  +HY C+VDL GRAG LE+A +MIEEMPM+P+ V+ GSLLAAC+ H 
Sbjct: 518 FSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHR 577

Query: 417 DVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSV 476
           ++ L + + + L +++P     YVLLSN+YA +GKW+   NVR++M+  GV K+PG S +
Sbjct: 578 NITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWI 637

Query: 477 EIDGKVHEFVAGDNYHADADNIYSMLDLLCHELK 505
           +I G  H F+  D  H     I+S+LD+L  E++
Sbjct: 638 KIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669

HSP 2 Score: 174.1 bits (440), Expect = 4.1e-42
Identity = 93/299 (31.10%), Postives = 155/299 (51.84%), Query Frame = 1


Query: 95  FITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFY 154
           F  LL +C      S  +   +H    K G  +  + +   LID YSKC  L   R+VF 
Sbjct: 22  FAKLLDSCIK-SKLSAIYVRYVHASVIKSGF-SNEIFIQNRLIDAYSKCGSLEDGRQVFD 81

Query: 155 NLGVKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALEC 214
            +  +N  +WN+++ G  + G ++ A  LF  MP RD  +W ++++G  +H   E+AL  
Sbjct: 82  KMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCY 141

Query: 215 FHQMQRSGVAADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSR 274
           F  M + G   +  S  +VL+AC+ L  +  G+ VH  +    F  ++ I ++L+DMYS+
Sbjct: 142 FAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSK 201

Query: 275 CGCIEFARQVFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGA 334
           CG +  A++VF +M  R +VSWNS+I  F  NG A E+L+ F  M +   +PD V+    
Sbjct: 202 CGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASV 261

Query: 335 LTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMK 394
           ++AC+    +  G E+   +    K+   I      VD+Y +  R+++A  + + MP++
Sbjct: 262 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318

HSP 3 Score: 128.6 bits (322), Expect = 2.0e-28
Identity = 102/422 (24.17%), Postives = 179/422 (42.42%), Query Frame = 1


Query: 60  WTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGY 119
           W S ++ + ++ +  EA   F  M   G   N  +F ++LSAC+     +      +H  
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNK--GVQVHSL 179

Query: 120 ACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIEL 179
             K       V +G+AL+DMYSKC  +  A++VF  +G +N VSWN+++  F +NG    
Sbjct: 180 IAKSPF-LSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGP--- 239

Query: 180 AIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACAD 239
                                       + +AL+ F  M  S V  D V++ +V++ACA 
Sbjct: 240 ----------------------------AVEALDVFQMMLESRVEPDEVTLASVISACAS 299

Query: 240 LGALTLGLWVH--------------------------------RFVMPQEFKDNIKISNS 299
           L A+ +G  VH                                RF+       N+    S
Sbjct: 300 LSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETS 359

Query: 300 LIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPD 359
           +I  Y+     + AR +F KMA+R +VSWN++I G+  NG  +E+L  F  +++E   P 
Sbjct: 360 MISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPT 419

Query: 360 GVSYTGALTACSHAGLVNKGLE-----LFDNMKSVHKITPRIEHYGCIVDLYGRAGRLED 419
             S+   L AC+    ++ G++     L    K        I     ++D+Y + G +E+
Sbjct: 420 HYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEE 479

Query: 420 ALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAA 445
              +  +M M+ + V   +++     +G  N A  L + + +   + D  ++ +  + +A
Sbjct: 480 GYLVFRKM-MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPD--HITMIGVLSA 504

[Close]

BLAST of Csa1G169950 vs. Swiss-Prot
Match: PP235_ARATH (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2)

HSP 1 Score: 347.1 bits (889), Expect = 3.5e-94
Identity = 163/468 (34.83%), Postives = 275/468 (58.76%), Query Frame = 1


Query: 49  FNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSE 108
           F+    + +  W   ++ Y R  +  E+      M    V P  +T + +LSAC+    +
Sbjct: 193 FDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDK 252

Query: 109 SFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTML 168
                  +H Y  +   +   + +  AL++ Y+ C ++  A ++F ++  ++ +SW +++
Sbjct: 253 DL--CKRVHEYVSECKTEPS-LRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIV 312

Query: 169 NGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYV 228
            G++  G ++LA   FD+MP RD ISWT +I+G L+ G   ++LE F +MQ +G+  D  
Sbjct: 313 KGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEF 372

Query: 229 SIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKM 288
           ++++VL ACA LG+L +G W+  ++   + K+++ + N+LIDMY +CGC E A++VF  M
Sbjct: 373 TMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM 432

Query: 289 AKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGL 348
            +R   +W +++VG A NG   E+++ F+ MQ    +PD ++Y G L+AC+H+G+V++  
Sbjct: 433 DQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQAR 492

Query: 349 ELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRT 408
           + F  M+S H+I P + HYGC+VD+ GRAG +++A  ++ +MPM PN +V G+LL A R 
Sbjct: 493 KFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRL 552

Query: 409 HGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYS 468
           H D  +AE   K + +L+P+  A Y LL NIYA   +W     VRR +    ++K PG+S
Sbjct: 553 HNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFS 612

Query: 469 SVEIDGKVHEFVAGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTIL 517
            +E++G  HEFVAGD  H  ++ IY  L+ L  E     Y+P +  +L
Sbjct: 613 LIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELL 657

HSP 2 Score: 105.1 bits (261), Expect = 2.3e-21
Identity = 79/304 (25.99%), Postives = 137/304 (45.07%), Query Frame = 1


Query: 57  IVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSL 116
           +V+W + +  + +     E    +  M   GV P+  TF  LL+        +      L
Sbjct: 99  VVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR-DGGALACGKKL 158

Query: 117 HGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGE 176
           H +  K+GL + ++ V  AL+ MYS C  +  AR VF     ++  SWN M++G+ R  E
Sbjct: 159 HCHVVKFGLGS-NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKE 218

Query: 177 IELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAA 236
            E +I+L  EM                               +R+ V+   V+++ VL+A
Sbjct: 219 YEESIELLVEM-------------------------------ERNLVSPTSVTLLLVLSA 278

Query: 237 CADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSW 296
           C+ +    L   VH +V   + + ++++ N+L++ Y+ CG ++ A ++F  M  R ++SW
Sbjct: 279 CSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISW 338

Query: 297 NSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKS 356
            SI+ G+   G    +  +F  M       D +S+T  +     AG  N+ LE+F  M+S
Sbjct: 339 TSIVKGYVERGNLKLARTYFDQMPVR----DRISWTIMIDGYLRAGCFNESLEIFREMQS 365

Query: 357 VHKI 361
              I
Sbjct: 399 AGMI 365

HSP 3 Score: 88.2 bits (217), Expect = 2.9e-16
Identity = 73/295 (24.75%), Postives = 129/295 (43.73%), Query Frame = 1


Query: 175 GEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVL 234
           G +  A +LF ++P  D + W  +I G  K     + +  +  M + GV  D  +   +L
Sbjct: 82  GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141

Query: 235 AACA-DLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTL 294
                D GAL  G  +H  V+      N+ + N+L+ MYS CG ++ AR VF +  K  +
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201

Query: 295 VSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDN 354
            SWN +I G+      +ES+E    M++    P  V+    L+ACS        ++  D 
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSK-------VKDKDL 261

Query: 355 MKSVH------KITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACR 414
            K VH      K  P +     +V+ Y   G ++ A+ +   M  + + +   S++    
Sbjct: 262 CKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYV 321

Query: 415 THGDVNLAERLMKHLFKLDPEGDAY-YVLLSNIYAAIGKWDGANNVRRTMKARGV 462
             G++ LA    +  F   P  D   + ++ + Y   G ++ +  + R M++ G+
Sbjct: 322 ERGNLKLA----RTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364

[Close]

BLAST of Csa1G169950 vs. TrEMBL
Match: F6HAB7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g00650 PE=4 SV=1)

HSP 1 Score: 687.6 bits (1773), Expect = 1.2e-194
Identity = 338/509 (66.40%), Postives = 409/509 (80.35%), Query Frame = 1


Query: 3   SIPSHTAT-PSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLWT 62
           S+P++TAT PS L   P   +S P S P +  FP  P+S   +++     + +DPIV WT
Sbjct: 2   SLPAYTATTPSSLVTHP---NSSPNSKPNQPTFPSRPHSTKYHLTRSHTHSPIDPIVSWT 61

Query: 63  SSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYAC 122
           SS+A +CRNGQL EAAAEF+RM++AGV PNHITF+TLLSAC DFP E   F  S+H Y  
Sbjct: 62  SSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGGSIHAYVR 121

Query: 123 KYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELAI 182
           K GLDT +VMVGTAL+DMYSKC QL  A  +F  + V+NSVSWNTM++G MRNGE+  AI
Sbjct: 122 KLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNGEVGEAI 181

Query: 183 QLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADLG 242
            LFD+M  RDAISWT++I G +K G  EQALE F +MQ +GV  DYV+II+VLAACA+LG
Sbjct: 182 VLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAACANLG 241

Query: 243 ALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIV 302
           AL LGLW++RFVM Q+FKDNIKISNSLIDMYSRCGCI  ARQVF +M KR+LVSWNS+IV
Sbjct: 242 ALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIV 301

Query: 303 GFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKIT 362
           GFA+NG A+E+LEFF  M+KEGF+PDGVS+TGALTACSH+GLV++GL+ FD MK   KI+
Sbjct: 302 GFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQFFDIMKRTRKIS 361

Query: 363 PRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKH 422
           PRIEHYGC+VDLY RAGRLEDALN+I  MPMKPNEVVLGSLLAACRTHGDV LAERLMK+
Sbjct: 362 PRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKY 421

Query: 423 LFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFVA 482
           L ++DP  D+ YVLLSNIYAA+G+WDGA+ VR+ MKA G+ KKPG+SS+E+DG +HEFVA
Sbjct: 422 LCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFSSIEMDGSIHEFVA 481

Query: 483 GDNYHADADNIYSMLDLLCHELKVCGYVP 511
           GD  H +  NIY+MLD L  EL++CGYVP
Sbjct: 482 GDKTHVETQNIYAMLDHLFLELRICGYVP 507

[Close]

BLAST of Csa1G169950 vs. TrEMBL
Match: W9SDQ7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001219 PE=4 SV=1)

HSP 1 Score: 676.8 bits (1745), Expect = 2.1e-191
Identity = 335/510 (65.69%), Postives = 406/510 (79.61%), Query Frame = 1


Query: 3   SIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLWTS 62
           S+P++T TP+QL  PP  P  + L +PT+  FP      H     K     ++P+V WTS
Sbjct: 2   SLPANTVTPTQLSQPP-KPPPLSLPSPTQPFFPNQHYPSH-----KLTYKPIEPVVKWTS 61

Query: 63  SLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYACK 122
           S+AR+C+NG+ SEAAAEF+RMRL+GVEPNH+TF+TLLS CAD    +  F +S+HGYA K
Sbjct: 62  SIARHCKNGRFSEAAAEFSRMRLSGVEPNHVTFVTLLSGCAD---SNISFGASIHGYARK 121

Query: 123 YGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELAIQ 182
              DT +VMVGTAL+ MY+K   +  AR VF ++  KNSVSWNTM++G+MRNG++  A++
Sbjct: 122 LCFDTSNVMVGTALVAMYAKRGLVDVARLVFDDIKEKNSVSWNTMIDGYMRNGKVRDAVE 181

Query: 183 LFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADLGA 242
           +FDEMP RDA+SWTALI G +K    E+ALE F +MQ S V  DYV++IAVLAACADLG 
Sbjct: 182 VFDEMPERDAVSWTALIGGFVKRRRFEEALEWFREMQVSSVEPDYVTVIAVLAACADLGT 241

Query: 243 LTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVG 302
           + LGLW++RF+M ++FKDN+KISNSLIDMYSRCGCIEFARQVF +M  RTLVSWNSIIVG
Sbjct: 242 VGLGLWMNRFIMNRKFKDNVKISNSLIDMYSRCGCIEFARQVFERMPNRTLVSWNSIIVG 301

Query: 303 FAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITP 362
           FAVNG A+E+L+FF  MQ+EGFKPDGVS+TGALTACSHAGLV +GL LF+NMK VH I  
Sbjct: 302 FAVNGHAEEALKFFNLMQREGFKPDGVSFTGALTACSHAGLVEEGLLLFENMKRVHGIRH 361

Query: 363 RIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHL 422
           RIEHYGCIVDLY RAGRLEDALN+IE MPMKPNEVVLGSLLAACRTHGD+ LAERLMK+L
Sbjct: 362 RIEHYGCIVDLYSRAGRLEDALNVIEYMPMKPNEVVLGSLLAACRTHGDITLAERLMKYL 421

Query: 423 FKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFVAG 482
             LDP GD+ YVLL+N+YAA+GKWDGA  VR+TMKA G+QK PG+SS+EID  +HEFVAG
Sbjct: 422 SDLDPGGDSNYVLLANMYAAVGKWDGAGKVRKTMKALGIQKTPGFSSIEIDCNIHEFVAG 481

Query: 483 DNYHADADNIYSMLDLLCHELKVCGYVPGS 513
           D  H D + IYSML+LL  ELK  GYVPG+
Sbjct: 482 DKSHVDKNCIYSMLELLSSELKASGYVPGN 502

[Close]

BLAST of Csa1G169950 vs. TrEMBL
Match: K7M2Y7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G313200 PE=4 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 1.7e-188
Identity = 319/522 (61.11%), Postives = 410/522 (78.54%), Query Frame = 1


Query: 4   IPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLWTSS 63
           +P+  ATP+QL  PP +PSS  L N T   F  +  + ++ +S +      DPIV WT+S
Sbjct: 3   LPACNATPTQLPHPPKSPSSNSLPNQTHSTFSNTNTNTNQGLSLRHTTKYNDPIVSWTTS 62

Query: 64  LARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFF-FASSLHGYACK 123
           +A YC++G L +AA++F +MR A +EPNHITFITLLSACA +PS S   F +++H +  K
Sbjct: 63  IADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRSSISFGTAIHAHVRK 122

Query: 124 YGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELAIQ 183
            GLD   VMVGTALIDMY+KC ++  AR  F  +GV+N VSWNTM++G+MRNG+ E A+Q
Sbjct: 123 LGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGYMRNGKFEDALQ 182

Query: 184 LFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADLGA 243
           +FD +P ++AISWTALI G +K  Y E+ALECF +MQ SGVA DYV++IAV+AACA+LG 
Sbjct: 183 VFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVIAVIAACANLGT 242

Query: 244 LTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVG 303
           L LGLWVHR VM Q+F++N+K+SNSLIDMYSRCGCI+ ARQVF +M +RTLVSWNSIIVG
Sbjct: 243 LGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQRTLVSWNSIIVG 302

Query: 304 FAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITP 363
           FAVNG ADE+L +F +MQ+EGFKPDGVSYTGAL ACSHAGL+ +GL +F++MK V +I P
Sbjct: 303 FAVNGLADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGEGLRIFEHMKRVRRILP 362

Query: 364 RIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHL 423
           RIEHYGC+VDLY RAGRLE+ALN+++ MPMKPNEV+LGSLLAACRT G++ LAE +M +L
Sbjct: 363 RIEHYGCLVDLYSRAGRLEEALNVLKNMPMKPNEVILGSLLAACRTQGNIGLAENVMNYL 422

Query: 424 FKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFVAG 483
            +LD  GD+ YVLLSNIYAA+GKWDGAN VRR MK RG+QKKPG+SS+EID  +H+FV+G
Sbjct: 423 IELDSGGDSNYVLLSNIYAAVGKWDGANKVRRRMKERGIQKKPGFSSIEIDSSIHKFVSG 482

Query: 484 DNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKD 525
           D  H + D+IY+ L+ L  EL++CGY+P      + KES +D
Sbjct: 483 DKSHEEKDHIYAALEFLSFELQLCGYIPD----FSGKESYED 520

[Close]

BLAST of Csa1G169950 vs. TrEMBL
Match: A0A0B2RPQ9_GLYSO (Pentatricopeptide repeat-containing protein, chloroplastic OS=Glycine soja GN=glysoja_001227 PE=4 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 1.7e-188
Identity = 319/522 (61.11%), Postives = 410/522 (78.54%), Query Frame = 1


Query: 4   IPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLWTSS 63
           +P+  ATP+QL  PP +PSS  L N T   F  +  + ++ +S +      DPIV WT+S
Sbjct: 3   LPACNATPTQLPHPPKSPSSNSLPNQTHSTFSNTNTNTNQGLSLRHTTKYNDPIVSWTTS 62

Query: 64  LARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFF-FASSLHGYACK 123
           +A YC++G L +AA++F +MR A +EPNHITFITLLSACA +PS S   F +++H +  K
Sbjct: 63  IADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRSSISFGTAIHAHVRK 122

Query: 124 YGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELAIQ 183
            GLD   VMVGTALIDMY+KC ++  AR  F  +GV+N VSWNTM++G+MRNG+ E A+Q
Sbjct: 123 LGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGYMRNGKFEDALQ 182

Query: 184 LFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADLGA 243
           +FD +P ++AISWTALI G +K  Y E+ALECF +MQ SGVA DYV++IAV+AACA+LG 
Sbjct: 183 VFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVIAVIAACANLGT 242

Query: 244 LTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVG 303
           L LGLWVHR VM Q+F++N+K+SNSLIDMYSRCGCI+ ARQVF +M +RTLVSWNSIIVG
Sbjct: 243 LGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQRTLVSWNSIIVG 302

Query: 304 FAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITP 363
           FAVNG ADE+L +F +MQ+EGFKPDGVSYTGAL ACSHAGL+ +GL +F++MK V +I P
Sbjct: 303 FAVNGLADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGEGLRIFEHMKRVRRILP 362

Query: 364 RIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHL 423
           RIEHYGC+VDLY RAGRLE+ALN+++ MPMKPNEV+LGSLLAACRT G++ LAE +M +L
Sbjct: 363 RIEHYGCLVDLYSRAGRLEEALNVLKNMPMKPNEVILGSLLAACRTQGNIGLAENVMNYL 422

Query: 424 FKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFVAG 483
            +LD  GD+ YVLLSNIYAA+GKWDGAN VRR MK RG+QKKPG+SS+EID  +H+FV+G
Sbjct: 423 IELDSGGDSNYVLLSNIYAAVGKWDGANKVRRRMKERGIQKKPGFSSIEIDSSIHKFVSG 482

Query: 484 DNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKD 525
           D  H + D+IY+ L+ L  EL++CGY+P      + KES +D
Sbjct: 483 DKSHEEKDHIYAALEFLSFELQLCGYIPD----FSGKESYED 520

[Close]

BLAST of Csa1G169950 vs. TrEMBL
Match: A0A067F459_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010496mg PE=4 SV=1)

HSP 1 Score: 664.1 bits (1712), Expect = 1.4e-187
Identity = 309/471 (65.61%), Postives = 389/471 (82.59%), Query Frame = 1


Query: 40  SPHRNISSKFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLL 99
           +P  +I +  + ++V+P V WTSS++R+CR+G+++EAA EFTRM L G  PNHITFITLL
Sbjct: 28  TPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLL 87

Query: 100 SACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVK 159
           S CADFPS+  F  + +HG  CK GLD  +VMVGTAL+DMY+K  ++  A  VF  + VK
Sbjct: 88  SGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVK 147

Query: 160 NSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQ 219
           +S +WN M++G+MR G+IE A+++FDEMP RDAISWTAL+NG +K GY E+ALECF +MQ
Sbjct: 148 SSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQ 207

Query: 220 RSGVAADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIE 279
            SGV  DYV+II+VL ACA++G L +GLW+HR+V+ Q+FKDN+K+ N+LID+YSRCGCIE
Sbjct: 208 ISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE 267

Query: 280 FARQVFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACS 339
           FARQVF +M KRTLVSWNSIIVGFAVNGF  E+LE+F +MQKEGFKPDGVS+TGALTACS
Sbjct: 268 FARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS 327

Query: 340 HAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVL 399
           HAGL+  GL  FD MK +++++PRIEHYGCIVDLY RAGRLEDALN++E MPMKPNEVVL
Sbjct: 328 HAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVL 387

Query: 400 GSLLAACRTHGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKAR 459
           GSLLAACRT GD+ LAERLMK+L  LDP  D+ YVLL+N+YAA+GKWDGA  +RRTMK R
Sbjct: 388 GSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGR 447

Query: 460 GVQKKPGYSSVEIDGKVHEFVAGDNYHADADNIYSMLDLLCHELKVCGYVP 511
           G+QKKPG SS+EI   +HEF+AGD  H ++++IYSML+LL  +LK+CGYVP
Sbjct: 448 GIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVP 498

[Close]

BLAST of Csa1G169950 vs. TAIR10
Match: AT1G05750.1 (AT1G05750.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 570.5 bits (1469), Expect = 1.1e-162
Identity = 277/463 (59.83%), Postives = 353/463 (76.24%), Query Frame = 1


Query: 48  KFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPS 107
           + N ++ +  V WTS +    RNG+L+EAA EF+ M LAGVEPNHITFI LLS C DF S
Sbjct: 27  RHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTS 86

Query: 108 ESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTM 167
            S      LHGYACK GLD  HVMVGTA+I MYSK  +   AR VF  +  KNSV+WNTM
Sbjct: 87  GSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTM 146

Query: 168 LNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADY 227
           ++G+MR+G+++ A ++FD+MP RD ISWTA+ING +K GY E+AL  F +MQ SGV  DY
Sbjct: 147 IDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDY 206

Query: 228 VSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVK 287
           V+IIA L AC +LGAL+ GLWVHR+V+ Q+FK+N+++SNSLID+Y RCGC+EFARQVF  
Sbjct: 207 VAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYN 266

Query: 288 MAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKG 347
           M KRT+VSWNS+IVGFA NG A ESL +F  MQ++GFKPD V++TGALTACSH GLV +G
Sbjct: 267 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326

Query: 348 LELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACR 407
           L  F  MK  ++I+PRIEHYGC+VDLY RAGRLEDAL +++ MPMKPNEVV+GSLLAAC 
Sbjct: 327 LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACS 386

Query: 408 THG-DVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPG 467
            HG ++ LAERLMKHL  L+ +  + YV+LSN+YAA GKW+GA+ +RR MK  G++K+PG
Sbjct: 387 NHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPG 446

Query: 468 YSSVEIDGKVHEFVAGDNYHADADNIYSMLDLLCHELKVCGYV 510
           +SS+EID  +H F+AGDN H +   I  +L+L+  +L++ G V
Sbjct: 447 FSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCV 489

[Close]

BLAST of Csa1G169950 vs. TAIR10
Match: AT3G22690.1 (AT3G22690.1 Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885))

HSP 1 Score: 365.2 bits (936), Expect = 7.0e-101
Identity = 183/477 (38.36%), Postives = 291/477 (61.01%), Query Frame = 1


Query: 49  FNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSE 108
           F+      + L  +  + Y R G   EA   F  M  +GV P+ I+ ++ +S+C+     
Sbjct: 294 FDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL--R 353

Query: 109 SFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTML 168
           +  +  S HGY  + G ++    +  ALIDMY KC +   A ++F  +  K  V+WN+++
Sbjct: 354 NILWGKSCHGYVLRNGFESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIV 413

Query: 169 NGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQ-RSGVAADY 228
            G++ NGE++ A + F+ MP ++ +SW  +I+GL++    E+A+E F  MQ + GV AD 
Sbjct: 414 AGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADG 473

Query: 229 VSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVK 288
           V+++++ +AC  LGAL L  W++ ++     + ++++  +L+DM+SRCG  E A  +F  
Sbjct: 474 VTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNS 533

Query: 289 MAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKG 348
           +  R + +W + I   A+ G A+ ++E F  M ++G KPDGV++ GALTACSH GLV +G
Sbjct: 534 LTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQG 593

Query: 349 LELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACR 408
            E+F +M  +H ++P   HYGC+VDL GRAG LE+A+ +IE+MPM+PN+V+  SLLAACR
Sbjct: 594 KEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACR 653

Query: 409 THGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGY 468
             G+V +A    + +  L PE    YVLLSN+YA+ G+W+    VR +MK +G++K PG 
Sbjct: 654 VQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGT 713

Query: 469 SSVEIDGKVHEFVAGDNYHADADNIYSMLDLLCHELKVCGYVPG-SDTILNTKESNK 524
           SS++I GK HEF +GD  H +  NI +MLD +       G+VP  S+ +++  E  K
Sbjct: 714 SSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEK 767

HSP 2 Score: 131.0 bits (328), Expect = 2.2e-30
Identity = 98/378 (25.93%), Postives = 167/378 (44.18%), Query Frame = 1


Query: 50  NPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSES 109
           N  S     ++ S +  Y  +G  +EA   F RM  +G+ P+  TF   LSACA   S +
Sbjct: 92  NSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAK--SRA 151

Query: 110 FFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLN 169
                 +HG   K G     + V  +L+  Y++C +L  ARKVF                
Sbjct: 152 KGNGIQIHGLIVKMGY-AKDLFVQNSLVHFYAECGELDSARKVF---------------- 211

Query: 170 GFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSG-VAADYV 229
                          DEM  R+ +SWT++I G  +  +++ A++ F +M R   V  + V
Sbjct: 212 ---------------DEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV 271

Query: 230 SIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKM 289
           +++ V++ACA L  L  G  V+ F+     + N  + ++L+DMY +C  I+ A+++F + 
Sbjct: 272 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 331

Query: 290 AKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACS--------- 349
               L   N++   +   G   E+L  F  M   G +PD +S   A+++CS         
Sbjct: 332 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 391

Query: 350 --HAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEV 409
             H  ++  G E +DN+               ++D+Y +  R + A  + + M  K   V
Sbjct: 392 SCHGYVLRNGFESWDNI------------CNALIDMYMKCHRQDTAFRIFDRMSNK-TVV 422

Query: 410 VLGSLLAACRTHGDVNLA 416
              S++A    +G+V+ A
Sbjct: 452 TWNSIVAGYVENGEVDAA 422

HSP 3 Score: 129.4 bits (324), Expect = 6.4e-30
Identity = 86/309 (27.83%), Postives = 145/309 (46.93%), Query Frame = 1


Query: 49  FNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRM-RLAGVEPNHITFITLLSACADFPS 108
           F+  S   +V WTS +  Y R     +A   F RM R   V PN +T + ++SACA    
Sbjct: 192 FDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKL-- 251

Query: 109 ESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTM 168
           E       ++ +    G++   +MV +AL+DMY KC  +  A+++F   G  N    N M
Sbjct: 252 EDLETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAM 311

Query: 169 LNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADY 228
            + ++R G                                + +AL  F+ M  SGV  D 
Sbjct: 312 ASNYVRQG-------------------------------LTREALGVFNLMMDSGVRPDR 371

Query: 229 VSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVK 288
           +S+++ +++C+ L  +  G   H +V+   F+    I N+LIDMY +C   + A ++F +
Sbjct: 372 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 431

Query: 289 MAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKG 348
           M+ +T+V+WNSI+ G+  NG  D + E F  M ++      VS+   ++      L  + 
Sbjct: 432 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFEEA 462

Query: 349 LELFDNMKS 357
           +E+F +M+S
Sbjct: 492 IEVFCSMQS 462

HSP 4 Score: 107.1 bits (266), Expect = 3.4e-23
Identity = 96/393 (24.43%), Postives = 171/393 (43.51%), Query Frame = 1


Query: 49  FNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRM-RLAGVEPNHITFITLLSACADFPS 108
           F+  S   +V WTS +  Y R     +A   F RM R   V PN +T + ++SACA    
Sbjct: 192 FDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKL-- 251

Query: 109 ESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTM 168
           E       ++ +    G++   +MV +AL+DMY KC  +  A+++F   G  N    N M
Sbjct: 252 EDLETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAM 311

Query: 169 LNGFMRNGEIELAIQLFDEMPTR----DAISWTALINGLLKHGYSEQALECFHQMQRSGV 228
            + ++R G    A+ +F+ M       D IS  + I+   +         C   + R+G 
Sbjct: 312 ASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNG- 371

Query: 229 AADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQ 288
              + S   +  A  D+            +  +     +   NS++  Y   G ++ A +
Sbjct: 372 ---FESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 431

Query: 289 VFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQ-KEGFKPDGVSYTGALTACSHAG 348
            F  M ++ +VSWN+II G       +E++E F +MQ +EG   DGV+     +AC H G
Sbjct: 432 TFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLG 491

Query: 349 LVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDAL---NMIEEMPMKPNEVVL 408
            ++    ++  ++  + I   +     +VD++ R G  E A+   N +    +      +
Sbjct: 492 ALDLAKWIYYYIEK-NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAI 551

Query: 409 GSLLAACRTHGDVNLAERLMKHLFKLDPEGDAY 433
           G++  A      + L + +++    L P+G A+
Sbjct: 552 GAMAMAGNAERAIELFDDMIEQ--GLKPDGVAF 574

[Close]

BLAST of Csa1G169950 vs. TAIR10
Match: AT2G29760.1 (AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 356.3 bits (913), Expect = 3.2e-98
Identity = 171/468 (36.54%), Postives = 289/468 (61.75%), Query Frame = 1


Query: 57  IVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSL 116
           +V W S +  + + G   +A   F +M    V+ +H+T + +LSACA     +  F   +
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI--RNLEFGRQV 256

Query: 117 HGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGE 176
             Y  +  ++  ++ +  A++DMY+KC  +  A+++F  +  K++V+W TML+G+  + +
Sbjct: 257 CSYIEENRVNV-NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 316

Query: 177 IELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQ-RSGVAADYVSIIAVLA 236
            E A ++ + MP +D ++W ALI+   ++G   +AL  FH++Q +  +  + +++++ L+
Sbjct: 317 YEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLS 376

Query: 237 ACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVS 296
           ACA +GAL LG W+H ++     + N  ++++LI MYS+CG +E +R+VF  + KR +  
Sbjct: 377 ACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFV 436

Query: 297 WNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMK 356
           W+++I G A++G  +E+++ FY MQ+   KP+GV++T    ACSH GLV++   LF  M+
Sbjct: 437 WSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 496

Query: 357 SVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLA 416
           S + I P  +HY CIVD+ GR+G LE A+  IE MP+ P+  V G+LL AC+ H ++NLA
Sbjct: 497 SNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLA 556

Query: 417 ERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGK 476
           E     L +L+P  D  +VLLSNIYA +GKW+  + +R+ M+  G++K+PG SS+EIDG 
Sbjct: 557 EMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGM 616

Query: 477 VHEFVAGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNK 524
           +HEF++GDN H  ++ +Y  L  +  +LK  GY P    +L   E  +
Sbjct: 617 IHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEE 661

HSP 2 Score: 119.8 bits (299), Expect = 5.1e-27
Identity = 77/266 (28.95%), Postives = 132/266 (49.62%), Query Frame = 1


Query: 90  PNHITFITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHA 149
           PN  TF  L+ A A+  S S     SLHG A K  + +  V V  +LI  Y  C  L  A
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSL--GQSLHGMAVKSAVGSD-VFVANSLIHCYFSCGDLDSA 188

Query: 150 RKVFYNLGVKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSE 209
            KVF  +  K+ VSWN+M+NGF++ G  + A++LF +M + D                  
Sbjct: 189 CKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESED------------------ 248

Query: 210 QALECFHQMQRSGVAADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLI 269
                        V A +V+++ VL+ACA +  L  G  V  ++       N+ ++N+++
Sbjct: 249 -------------VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAML 308

Query: 270 DMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGV 329
           DMY++CG IE A+++F  M ++  V+W +++ G+A++   + + E   +M ++    D V
Sbjct: 309 DMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK----DIV 356

Query: 330 SYTGALTACSHAGLVNKGLELFDNMK 356
           ++   ++A    G  N+ L +F  ++
Sbjct: 369 AWNALISAYEQNGKPNEALIVFHELQ 356

HSP 3 Score: 114.0 bits (284), Expect = 2.8e-25
Identity = 93/329 (28.27%), Postives = 157/329 (47.72%), Query Frame = 1


Query: 90  PNHITFITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHA 149
           PN  TF  L+ A A+  S S     SLHG A K  + +  V V  +LI  Y  C  L  A
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSL--GQSLHGMAVKSAVGSD-VFVANSLIHCYFSCGDLDSA 188

Query: 150 RKVFYNLGVKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSE 209
            KVF  +  K+ VSWN+M+NGF++ G  + A++LF +M + D  +    + G+L      
Sbjct: 189 CKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI 248

Query: 210 QALECFHQMQRSGVAADYVSIIAVLA-ACADLGALTLGLW-VHRFVMPQEFKDNIKISNS 269
           + LE F +   S +  + V++   LA A  D+      +    R     E KDN+  + +
Sbjct: 249 RNLE-FGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWT-T 308

Query: 270 LIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQ-KEGFKP 329
           ++D Y+     E AR+V   M ++ +V+WN++I  +  NG  +E+L  F+ +Q ++  K 
Sbjct: 309 MLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKL 368

Query: 330 DGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNM 389
           + ++    L+AC+  G +  G  +   +K  H I         ++ +Y + G LE +  +
Sbjct: 369 NQITLVSTLSACAQVGALELGRWIHSYIKK-HGIRMNFHVTSALIHMYSKCGDLEKSREV 428

Query: 390 IEEMPMKPNEVVLGSLLAACRTHGDVNLA 416
              +  K +  V  +++     HG  N A
Sbjct: 429 FNSVE-KRDVFVWSAMIGGLAMHGCGNEA 450

HSP 4 Score: 100.1 bits (248), Expect = 4.2e-21
Identity = 59/220 (26.82%), Postives = 110/220 (50.00%), Query Frame = 1


Query: 177 IELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQM-QRSGVAADYVSIIAVLA 236
           +E A ++FDE+P  ++ +W  LI           ++  F  M   S    +  +   ++ 
Sbjct: 80  LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139

Query: 237 ACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVS 296
           A A++ +L+LG  +H   +      ++ ++NSLI  Y  CG ++ A +VF  + ++ +VS
Sbjct: 140 AAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVS 199

Query: 297 WNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMK 356
           WNS+I GF   G  D++LE F  M+ E  K   V+  G L+AC+    +  G ++   ++
Sbjct: 200 WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE 259

Query: 357 SVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPN 396
             +++   +     ++D+Y + G +EDA  + + M  K N
Sbjct: 260 E-NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN 298

[Close]

BLAST of Csa1G169950 vs. TAIR10
Match: AT2G13600.1 (AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 350.1 bits (897), Expect = 2.3e-96
Identity = 178/454 (39.21%), Postives = 271/454 (59.69%), Query Frame = 1


Query: 57  IVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSL 116
           +V W S +  + +NG   EA   F  M  + VEP+ +T  +++SACA     +      +
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASL--SAIKVGQEV 277

Query: 117 HGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGE 176
           HG   K       +++  A +DMY+KC+++  AR +F ++ ++N ++  +M++G+     
Sbjct: 278 HGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAS 337

Query: 177 IELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAA 236
            + A  +F +M  R+ +SW ALI G  ++G +E+AL  F  ++R  V   + S   +L A
Sbjct: 338 TKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKA 397

Query: 237 CADLGALTLGLWVHRFVMPQEFK------DNIKISNSLIDMYSRCGCIEFARQVFVKMAK 296
           CADL  L LG+  H  V+   FK      D+I + NSLIDMY +CGC+E    VF KM +
Sbjct: 398 CADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMME 457

Query: 297 RTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLEL 356
           R  VSWN++I+GFA NG+ +E+LE F  M + G KPD ++  G L+AC HAG V +G   
Sbjct: 458 RDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHY 517

Query: 357 FDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHG 416
           F +M     + P  +HY C+VDL GRAG LE+A +MIEEMPM+P+ V+ GSLLAAC+ H 
Sbjct: 518 FSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHR 577

Query: 417 DVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSV 476
           ++ L + + + L +++P     YVLLSN+YA +GKW+   NVR++M+  GV K+PG S +
Sbjct: 578 NITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWI 637

Query: 477 EIDGKVHEFVAGDNYHADADNIYSMLDLLCHELK 505
           +I G  H F+  D  H     I+S+LD+L  E++
Sbjct: 638 KIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669

HSP 2 Score: 174.1 bits (440), Expect = 2.3e-43
Identity = 93/299 (31.10%), Postives = 155/299 (51.84%), Query Frame = 1


Query: 95  FITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFY 154
           F  LL +C      S  +   +H    K G  +  + +   LID YSKC  L   R+VF 
Sbjct: 22  FAKLLDSCIK-SKLSAIYVRYVHASVIKSGF-SNEIFIQNRLIDAYSKCGSLEDGRQVFD 81

Query: 155 NLGVKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALEC 214
            +  +N  +WN+++ G  + G ++ A  LF  MP RD  +W ++++G  +H   E+AL  
Sbjct: 82  KMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCY 141

Query: 215 FHQMQRSGVAADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSR 274
           F  M + G   +  S  +VL+AC+ L  +  G+ VH  +    F  ++ I ++L+DMYS+
Sbjct: 142 FAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSK 201

Query: 275 CGCIEFARQVFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGA 334
           CG +  A++VF +M  R +VSWNS+I  F  NG A E+L+ F  M +   +PD V+    
Sbjct: 202 CGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASV 261

Query: 335 LTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMK 394
           ++AC+    +  G E+   +    K+   I      VD+Y +  R+++A  + + MP++
Sbjct: 262 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318

HSP 3 Score: 128.6 bits (322), Expect = 1.1e-29
Identity = 102/422 (24.17%), Postives = 179/422 (42.42%), Query Frame = 1


Query: 60  WTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGY 119
           W S ++ + ++ +  EA   F  M   G   N  +F ++LSAC+     +      +H  
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNK--GVQVHSL 179

Query: 120 ACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIEL 179
             K       V +G+AL+DMYSKC  +  A++VF  +G +N VSWN+++  F +NG    
Sbjct: 180 IAKSPF-LSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGP--- 239

Query: 180 AIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACAD 239
                                       + +AL+ F  M  S V  D V++ +V++ACA 
Sbjct: 240 ----------------------------AVEALDVFQMMLESRVEPDEVTLASVISACAS 299

Query: 240 LGALTLGLWVH--------------------------------RFVMPQEFKDNIKISNS 299
           L A+ +G  VH                                RF+       N+    S
Sbjct: 300 LSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETS 359

Query: 300 LIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPD 359
           +I  Y+     + AR +F KMA+R +VSWN++I G+  NG  +E+L  F  +++E   P 
Sbjct: 360 MISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPT 419

Query: 360 GVSYTGALTACSHAGLVNKGLE-----LFDNMKSVHKITPRIEHYGCIVDLYGRAGRLED 419
             S+   L AC+    ++ G++     L    K        I     ++D+Y + G +E+
Sbjct: 420 HYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEE 479

Query: 420 ALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAA 445
              +  +M M+ + V   +++     +G  N A  L + + +   + D  ++ +  + +A
Sbjct: 480 GYLVFRKM-MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPD--HITMIGVLSA 504

[Close]

BLAST of Csa1G169950 vs. TAIR10
Match: AT3G15930.1 (AT3G15930.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 347.1 bits (889), Expect = 2.0e-95
Identity = 163/468 (34.83%), Postives = 275/468 (58.76%), Query Frame = 1


Query: 49  FNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSE 108
           F+    + +  W   ++ Y R  +  E+      M    V P  +T + +LSAC+    +
Sbjct: 193 FDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDK 252

Query: 109 SFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTML 168
                  +H Y  +   +   + +  AL++ Y+ C ++  A ++F ++  ++ +SW +++
Sbjct: 253 DL--CKRVHEYVSECKTEPS-LRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIV 312

Query: 169 NGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYV 228
            G++  G ++LA   FD+MP RD ISWT +I+G L+ G   ++LE F +MQ +G+  D  
Sbjct: 313 KGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEF 372

Query: 229 SIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKM 288
           ++++VL ACA LG+L +G W+  ++   + K+++ + N+LIDMY +CGC E A++VF  M
Sbjct: 373 TMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM 432

Query: 289 AKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGL 348
            +R   +W +++VG A NG   E+++ F+ MQ    +PD ++Y G L+AC+H+G+V++  
Sbjct: 433 DQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQAR 492

Query: 349 ELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRT 408
           + F  M+S H+I P + HYGC+VD+ GRAG +++A  ++ +MPM PN +V G+LL A R 
Sbjct: 493 KFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRL 552

Query: 409 HGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYS 468
           H D  +AE   K + +L+P+  A Y LL NIYA   +W     VRR +    ++K PG+S
Sbjct: 553 HNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFS 612

Query: 469 SVEIDGKVHEFVAGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTIL 517
            +E++G  HEFVAGD  H  ++ IY  L+ L  E     Y+P +  +L
Sbjct: 613 LIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELL 657

HSP 2 Score: 105.1 bits (261), Expect = 1.3e-22
Identity = 79/304 (25.99%), Postives = 137/304 (45.07%), Query Frame = 1


Query: 57  IVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSL 116
           +V+W + +  + +     E    +  M   GV P+  TF  LL+        +      L
Sbjct: 99  VVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR-DGGALACGKKL 158

Query: 117 HGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGE 176
           H +  K+GL + ++ V  AL+ MYS C  +  AR VF     ++  SWN M++G+ R  E
Sbjct: 159 HCHVVKFGLGS-NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKE 218

Query: 177 IELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAA 236
            E +I+L  EM                               +R+ V+   V+++ VL+A
Sbjct: 219 YEESIELLVEM-------------------------------ERNLVSPTSVTLLLVLSA 278

Query: 237 CADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSW 296
           C+ +    L   VH +V   + + ++++ N+L++ Y+ CG ++ A ++F  M  R ++SW
Sbjct: 279 CSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISW 338

Query: 297 NSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKS 356
            SI+ G+   G    +  +F  M       D +S+T  +     AG  N+ LE+F  M+S
Sbjct: 339 TSIVKGYVERGNLKLARTYFDQMPVR----DRISWTIMIDGYLRAGCFNESLEIFREMQS 365

Query: 357 VHKI 361
              I
Sbjct: 399 AGMI 365

HSP 3 Score: 88.2 bits (217), Expect = 1.6e-17
Identity = 73/295 (24.75%), Postives = 129/295 (43.73%), Query Frame = 1


Query: 175 GEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVL 234
           G +  A +LF ++P  D + W  +I G  K     + +  +  M + GV  D  +   +L
Sbjct: 82  GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141

Query: 235 AACA-DLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTL 294
                D GAL  G  +H  V+      N+ + N+L+ MYS CG ++ AR VF +  K  +
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201

Query: 295 VSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDN 354
            SWN +I G+      +ES+E    M++    P  V+    L+ACS        ++  D 
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSK-------VKDKDL 261

Query: 355 MKSVH------KITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACR 414
            K VH      K  P +     +V+ Y   G ++ A+ +   M  + + +   S++    
Sbjct: 262 CKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYV 321

Query: 415 THGDVNLAERLMKHLFKLDPEGDAY-YVLLSNIYAAIGKWDGANNVRRTMKARGV 462
             G++ LA    +  F   P  D   + ++ + Y   G ++ +  + R M++ G+
Sbjct: 322 ERGNLKLA----RTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364

[Close]

BLAST of Csa1G169950 vs. NCBI nr
Match: gi|449443656|ref|XP_004139593.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Cucumis sativus])

HSP 1 Score: 1070.5 bits (2767), Expect = 9.8e-310
Identity = 525/525 (100.00%), Postives = 525/525 (100.00%), Query Frame = 1


Query: 1   MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLW 60
           MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLW
Sbjct: 1   MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLW 60

Query: 61  TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA 120
           TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA
Sbjct: 61  TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA 120

Query: 121 CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA 180
           CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA
Sbjct: 121 CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA 180

Query: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240
           IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL
Sbjct: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240

Query: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300
           GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII
Sbjct: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300

Query: 301 VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360
           VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI
Sbjct: 301 VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360

Query: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK 420
           TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK
Sbjct: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK 420

Query: 421 HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV 480
           HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV
Sbjct: 421 HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV 480

Query: 481 AGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKDD 526
           AGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKDD
Sbjct: 481 AGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKDD 525

[Close]

BLAST of Csa1G169950 vs. NCBI nr
Match: gi|659118080|ref|XP_008458940.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Cucumis melo])

HSP 1 Score: 945.3 bits (2442), Expect = 4.6e-272
Identity = 473/524 (90.27%), Postives = 488/524 (93.13%), Query Frame = 1


Query: 1   MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLW 60
           MSSIPSH A+PSQLQ PP   SSIPLSNPTK+NFPRSP SPH NI SKF  NSV PIV W
Sbjct: 1   MSSIPSHIASPSQLQQPP--SSSIPLSNPTKVNFPRSPKSPHCNIFSKFTANSVHPIVQW 60

Query: 61  TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA 120
           TSS+ARYC NGQL EAAAEFTRMRLAGVEPNHITFITLLS CADFPSESF FASSLHGYA
Sbjct: 61  TSSIARYCGNGQLPEAAAEFTRMRLAGVEPNHITFITLLSGCADFPSESF-FASSLHGYA 120

Query: 121 CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA 180
           CK+GLDTGHVMVGTALIDMYSKC+QLG A+KVF  LGVKNSVSWNTMLNGFMRNGEIELA
Sbjct: 121 CKFGLDTGHVMVGTALIDMYSKCSQLGLAKKVFDYLGVKNSVSWNTMLNGFMRNGEIELA 180

Query: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240
           IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGV ADYVSIIAVLAACADL
Sbjct: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVVADYVSIIAVLAACADL 240

Query: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300
           GALT GLWV+RFVM QEFKDN++ISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII
Sbjct: 241 GALTSGLWVNRFVMQQEFKDNVRISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300

Query: 301 VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360
           VGFA NGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMK VHKI
Sbjct: 301 VGFAFNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVHKI 360

Query: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK 420
           TP IEHYGCIVDLYGRAGRLEDA N+IEEMPMKPNEVVLGSLLAACRTHGDV LAERLMK
Sbjct: 361 TPGIEHYGCIVDLYGRAGRLEDASNVIEEMPMKPNEVVLGSLLAACRTHGDVRLAERLMK 420

Query: 421 HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV 480
           H+FKLD  GD+ YVLLSNIYAAIGKW+GAN VRRTMKARGVQKK GYSSVEIDGKVHEFV
Sbjct: 421 HIFKLDSVGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKRGYSSVEIDGKVHEFV 480

Query: 481 AGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKD 525
           AGD YHADADNIYSMLDLL HELKVCGYVP +D ILNTK+SNKD
Sbjct: 481 AGDKYHADADNIYSMLDLLFHELKVCGYVPDTDIILNTKDSNKD 521

[Close]

BLAST of Csa1G169950 vs. NCBI nr
Match: gi|1009113399|ref|XP_015873124.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 703.4 bits (1814), Expect = 3.1e-199
Identity = 340/511 (66.54%), Postives = 420/511 (82.19%), Query Frame = 1


Query: 3   SIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHR---NISSKFNPNSVDPIVL 62
           S+P++T  P+  Q  P  P ++P SNPT    P SPN+P R   ++S K     +DP V 
Sbjct: 2   SVPANTLPPTLPQ--PAKPLTLPPSNPTIR--PTSPNTPRREKRSVSLKQTHKQIDPTVS 61

Query: 63  WTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGY 122
           WTSS+AR+CRNG+LSEAAAEF RMRL GVEPNHIT ITLLS CADFP +   F +S+HGY
Sbjct: 62  WTSSIARHCRNGRLSEAAAEFARMRLTGVEPNHITLITLLSGCADFPLDILCFGASVHGY 121

Query: 123 ACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIEL 182
           A K GLD  +VMVGTA++DMY+KC ++  +R  F +LGVKN+V+WNT+++G+MRNGE+E 
Sbjct: 122 ARKSGLDRDNVMVGTAIVDMYAKCGRMDFSRLAFDDLGVKNTVTWNTLIDGYMRNGEVEC 181

Query: 183 AIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACAD 242
           A+++F+EMP RDAISWTALI G +K G  E++L+ F QMQ SGV  DYV++IAVL ACA+
Sbjct: 182 AVEMFEEMPDRDAISWTALIGGFIKRGRLEESLKWFRQMQISGVKPDYVTMIAVLDACAE 241

Query: 243 LGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSI 302
           LG L LGLW ++++M +++KDNI+++NSLIDMYSRCGCI+FARQVF KM +RTLVSWNSI
Sbjct: 242 LGTLGLGLWTNKYIMNKDYKDNIRMNNSLIDMYSRCGCIQFARQVFEKMPERTLVSWNSI 301

Query: 303 IVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHK 362
           IVGFA+NG A+E+LEFF  MQKEGFKPDGVS+TGALTACSH+GLV++GL  F+NMK VHK
Sbjct: 302 IVGFAINGHAEEALEFFDLMQKEGFKPDGVSFTGALTACSHSGLVDEGLSFFNNMKRVHK 361

Query: 363 ITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLM 422
           I PRIEHYGC+VDLY RAGRLEDAL++IE+MPMKPNEVV+GSLLAACRTHGDV+LAERLM
Sbjct: 362 IKPRIEHYGCMVDLYSRAGRLEDALHVIEKMPMKPNEVVVGSLLAACRTHGDVSLAERLM 421

Query: 423 KHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEF 482
           K+LF+LDP GD+ YVLL+NIYAA+G+WDGA  VR+TMKA GVQK PG SS+EID  +HEF
Sbjct: 422 KYLFELDPGGDSNYVLLANIYAAVGRWDGAGKVRKTMKALGVQKTPGLSSIEIDCNIHEF 481

Query: 483 VAGDNYHADADNIYSMLDLLCHELKVCGYVP 511
           VAGD  H D + IY ML+LL  ELK CGY+P
Sbjct: 482 VAGDKSHVDTECIYEMLELLSLELKACGYIP 508

[Close]

BLAST of Csa1G169950 vs. NCBI nr
Match: gi|359479098|ref|XP_002274209.2| (PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Vitis vinifera])

HSP 1 Score: 687.6 bits (1773), Expect = 1.7e-194
Identity = 338/509 (66.40%), Postives = 409/509 (80.35%), Query Frame = 1


Query: 3   SIPSHTAT-PSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLWT 62
           S+P++TAT PS L   P   +S P S P +  FP  P+S   +++     + +DPIV WT
Sbjct: 2   SLPAYTATTPSSLVTHP---NSSPNSKPNQPTFPSRPHSTKYHLTRSHTHSPIDPIVSWT 61

Query: 63  SSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYAC 122
           SS+A +CRNGQL EAAAEF+RM++AGV PNHITF+TLLSAC DFP E   F  S+H Y  
Sbjct: 62  SSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGGSIHAYVR 121

Query: 123 KYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELAI 182
           K GLDT +VMVGTAL+DMYSKC QL  A  +F  + V+NSVSWNTM++G MRNGE+  AI
Sbjct: 122 KLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNGEVGEAI 181

Query: 183 QLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADLG 242
            LFD+M  RDAISWT++I G +K G  EQALE F +MQ +GV  DYV+II+VLAACA+LG
Sbjct: 182 VLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAACANLG 241

Query: 243 ALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIV 302
           AL LGLW++RFVM Q+FKDNIKISNSLIDMYSRCGCI  ARQVF +M KR+LVSWNS+IV
Sbjct: 242 ALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIV 301

Query: 303 GFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKIT 362
           GFA+NG A+E+LEFF  M+KEGF+PDGVS+TGALTACSH+GLV++GL+ FD MK   KI+
Sbjct: 302 GFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQFFDIMKRTRKIS 361

Query: 363 PRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKH 422
           PRIEHYGC+VDLY RAGRLEDALN+I  MPMKPNEVVLGSLLAACRTHGDV LAERLMK+
Sbjct: 362 PRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKY 421

Query: 423 LFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFVA 482
           L ++DP  D+ YVLLSNIYAA+G+WDGA+ VR+ MKA G+ KKPG+SS+E+DG +HEFVA
Sbjct: 422 LCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFSSIEMDGSIHEFVA 481

Query: 483 GDNYHADADNIYSMLDLLCHELKVCGYVP 511
           GD  H +  NIY+MLD L  EL++CGYVP
Sbjct: 482 GDKTHVETQNIYAMLDHLFLELRICGYVP 507

[Close]

BLAST of Csa1G169950 vs. NCBI nr
Match: gi|703084743|ref|XP_010092553.1| (hypothetical protein L484_001219 [Morus notabilis])

HSP 1 Score: 676.8 bits (1745), Expect = 3.1e-191
Identity = 335/510 (65.69%), Postives = 406/510 (79.61%), Query Frame = 1


Query: 3   SIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLWTS 62
           S+P++T TP+QL  PP  P  + L +PT+  FP      H     K     ++P+V WTS
Sbjct: 2   SLPANTVTPTQLSQPP-KPPPLSLPSPTQPFFPNQHYPSH-----KLTYKPIEPVVKWTS 61

Query: 63  SLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYACK 122
           S+AR+C+NG+ SEAAAEF+RMRL+GVEPNH+TF+TLLS CAD    +  F +S+HGYA K
Sbjct: 62  SIARHCKNGRFSEAAAEFSRMRLSGVEPNHVTFVTLLSGCAD---SNISFGASIHGYARK 121

Query: 123 YGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELAIQ 182
              DT +VMVGTAL+ MY+K   +  AR VF ++  KNSVSWNTM++G+MRNG++  A++
Sbjct: 122 LCFDTSNVMVGTALVAMYAKRGLVDVARLVFDDIKEKNSVSWNTMIDGYMRNGKVRDAVE 181

Query: 183 LFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADLGA 242
           +FDEMP RDA+SWTALI G +K    E+ALE F +MQ S V  DYV++IAVLAACADLG 
Sbjct: 182 VFDEMPERDAVSWTALIGGFVKRRRFEEALEWFREMQVSSVEPDYVTVIAVLAACADLGT 241

Query: 243 LTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVG 302
           + LGLW++RF+M ++FKDN+KISNSLIDMYSRCGCIEFARQVF +M  RTLVSWNSIIVG
Sbjct: 242 VGLGLWMNRFIMNRKFKDNVKISNSLIDMYSRCGCIEFARQVFERMPNRTLVSWNSIIVG 301

Query: 303 FAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITP 362
           FAVNG A+E+L+FF  MQ+EGFKPDGVS+TGALTACSHAGLV +GL LF+NMK VH I  
Sbjct: 302 FAVNGHAEEALKFFNLMQREGFKPDGVSFTGALTACSHAGLVEEGLLLFENMKRVHGIRH 361

Query: 363 RIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHL 422
           RIEHYGCIVDLY RAGRLEDALN+IE MPMKPNEVVLGSLLAACRTHGD+ LAERLMK+L
Sbjct: 362 RIEHYGCIVDLYSRAGRLEDALNVIEYMPMKPNEVVLGSLLAACRTHGDITLAERLMKYL 421

Query: 423 FKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFVAG 482
             LDP GD+ YVLL+N+YAA+GKWDGA  VR+TMKA G+QK PG+SS+EID  +HEFVAG
Sbjct: 422 SDLDPGGDSNYVLLANMYAAVGKWDGAGKVRKTMKALGIQKTPGFSSIEIDCNIHEFVAG 481

Query: 483 DNYHADADNIYSMLDLLCHELKVCGYVPGS 513
           D  H D + IYSML+LL  ELK  GYVPG+
Sbjct: 482 DKSHVDKNCIYSMLELLSSELKASGYVPGN 502

The following BLAST results are available for this feature:

BLAST of Csa1G169950 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PPR13_ARATH	1.9e-161	59.83	Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidop...	[more]
PP249_ARATH	1.2e-99	38.36	Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana GN...	[more]
PP175_ARATH	5.8e-97	36.54	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
PP151_ARATH	4.1e-95	39.21	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN...	[more]
PP235_ARATH	3.5e-94	34.83	Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis th...	[more]

BLAST of Csa1G169950 vs. TrEMBL


Match Name	E-value	Identity	Description
F6HAB7_VITVI	1.2e-194	66.40	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g00650 PE=4 SV=...	[more]
W9SDQ7_9ROSA	2.1e-191	65.69	Uncharacterized protein OS=Morus notabilis GN=L484_001219 PE=4 SV=1	[more]
K7M2Y7_SOYBN	1.7e-188	61.11	Uncharacterized protein OS=Glycine max GN=GLYMA_13G313200 PE=4 SV=1	[more]
A0A0B2RPQ9_GLYSO	1.7e-188	61.11	Pentatricopeptide repeat-containing protein, chloroplastic OS=Glycine soja GN=gl...	[more]
A0A067F459_CITSI	1.4e-187	65.61	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010496mg PE=4 SV=1	[more]

BLAST of Csa1G169950 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G05750.1	1.1e-162	59.83	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G22690.1	7.0e-101	38.36	Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatrico...	[more]
AT2G29760.1	3.2e-98	36.54	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G13600.1	2.3e-96	39.21	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G15930.1	2.0e-95	34.83	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of Csa1G169950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443656\|ref\|XP_004139593.1\|	9.8e-310	100.00	PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic ...	[more]
gi\|659118080\|ref\|XP_008458940.1\|	4.6e-272	90.27	PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic ...	[more]
gi\|1009113399\|ref\|XP_015873124.1\|	3.1e-199	66.54	PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic ...	[more]
gi\|359479098\|ref\|XP_002274209.2\|	1.7e-194	66.40	PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic ...	[more]
gi\|703084743\|ref\|XP_010092553.1\|	3.1e-191	65.69	hypothetical protein L484_001219 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008568	microtubule-severing ATPase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G169950.1	Csa1G169950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 294..324 score: 1.3E-5coord: 329..356 score: 0.0061coord: 266..291 score: 0.0012coord: 366..391 score: 0.
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 57..103 score: 1.3E-7coord: 191..237 score: 1.4E-8coord: 159..190 score: 9.
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 193..225 score: 1.1E-7coord: 329..356 score: 0.0029coord: 367..390 score: 7.8E-4coord: 294..327 score: 1.6E-5coord: 162..190 score: 9.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 191..225 score: 11.564coord: 292..326 score: 11.082coord: 56..90 score: 9.668coord: 327..357 score: 7.859coord: 429..463 score: 6.862coord: 363..397 score: 8.166coord: 261..291 score: 8.254coord: 160..190 score: 11
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 163..222 score: 2.1E-9coord: 361..449 score: 2.1E-9coord: 67..105 score: 2.
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 171..215 score: 7.59E-6coord: 378..450 score: 7.5
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 1..470 score: 1.8E
None	No IPR available	PANTHER	PTHR24015:SF778	SUBFAMILY NOT NAMED	coord: 1..470 score: 1.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G169950	Cla011037	Watermelon (97103) v1	cuwmB042
Csa1G169950	ClCG01G011550	Watermelon (Charleston Gray)	cuwcgB022
Csa1G169950	Lsi02G011870	Bottle gourd (USVL1VR-Ls)	culsiB032
Csa1G169950	Cla97C01G011170	Watermelon (97103) v2	cuwmbB009
Csa1G169950	BhiUN452G8	Wax gourd	cuwgoB067
Csa1G169950	CSPI01G15130	Wild cucumber (PI 183967)	cpicuB000
Csa1G169950	Cucsa.319570	Cucumber (Gy14) v1	cgycuB457
Csa1G169950	CmaCh18G006360	Cucurbita maxima (Rimu)	cmacuB399
Csa1G169950	CmoCh18G006260	Cucurbita moschata (Rifu)	cmocuB392
Csa1G169950	CsGy1G014900	Cucumber (Gy14) v2	cgybcuB001
Csa1G169950	Carg26258	Silver-seed gourd	carcuB0000

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G169950	Cucurbita maxima (Rimu)	cmacuB222
Csa1G169950	Cucurbita moschata (Rifu)	cmocuB206
Csa1G169950	Melon (DHL92) v3.5.1	cumeB015
Csa1G169950	Cucurbita pepo (Zucchini)	cpecuB003
Csa1G169950	Cucurbita pepo (Zucchini)	cpecuB020
Csa1G169950	Melon (DHL92) v3.6.1	cumedB010