Csa1G168910 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCCACATCTCACTCAACTACAAAAGCCTAACCCACACACCAAAACGCTCTCTCAATTATGTCTAACATCCGGAAGAACAAGTTTTTTACAACCATTTTCTCCTCCACCGCCGGCTGTGGCGGCTGTCAAAAGCCAAAACTCTCTGACATCGTCCAACCTGACAAGAAACCCCCCACCACCATCGTCAGACGCTCCTCTTCAAGCTCCAGCACTGATCAGAACGGCACCTTCTCTCTCGACGAAGACTACACCAGCTCCGCTTCCAAATCCACGGGAACCCAAAGCCCGGTGGCTATTCTCATCGGCGACAGCATCGCGGTCGAGAAGGATTCCGACGACCCATACGAGGATTTTCGGGGATCGATGGTTGAGATGATAGTGGAGAAGAGAATTTACTCTCCCAACGGCCTTCAAGAGCTTCTGAATTGCTTCCTCCATCTCAATTCTCCTTACCACCACGAAATAATCGTGAAAGCGTTCACTCAAATTTCAAATGAGTTTGAATCGTCCCACCGTCTTTGGAATATGTCTAATAATACGGACTGGAAAAGGCGGTCCGGCGGTGAAGGTTGATGGATAGATGTGAGGTGGTGCGGAGGGCATGTGAGGGCATTGAATTGGTGACATGAAAGACGGAGGAGGGAGGGTAGAATGGTG ATGTCTAACATCCGGAAGAACAAGTTTTTTACAACCATTTTCTCCTCCACCGCCGGCTGTGGCGGCTGTCAAAAGCCAAAACTCTCTGACATCGTCCAACCTGACAAGAAACCCCCCACCACCATCGTCAGACGCTCCTCTTCAAGCTCCAGCACTGATCAGAACGGCACCTTCTCTCTCGACGAAGACTACACCAGCTCCGCTTCCAAATCCACGGGAACCCAAAGCCCGGTGGCTATTCTCATCGGCGACAGCATCGCGGTCGAGAAGGATTCCGACGACCCATACGAGGATTTTCGGGGATCGATGGTTGAGATGATAGTGGAGAAGAGAATTTACTCTCCCAACGGCCTTCAAGAGCTTCTGAATTGCTTCCTCCATCTCAATTCTCCTTACCACCACGAAATAATCGTGAAAGCGTTCACTCAAATTTCAAATGAGTTTGAATCGTCCCACCGTCTTTGGAATATGTCTAATAATACGGACTGGAAAAGGCGGTCCGGCGGTGAAGGTTGA ATGTCTAACATCCGGAAGAACAAGTTTTTTACAACCATTTTCTCCTCCACCGCCGGCTGTGGCGGCTGTCAAAAGCCAAAACTCTCTGACATCGTCCAACCTGACAAGAAACCCCCCACCACCATCGTCAGACGCTCCTCTTCAAGCTCCAGCACTGATCAGAACGGCACCTTCTCTCTCGACGAAGACTACACCAGCTCCGCTTCCAAATCCACGGGAACCCAAAGCCCGGTGGCTATTCTCATCGGCGACAGCATCGCGGTCGAGAAGGATTCCGACGACCCATACGAGGATTTTCGGGGATCGATGGTTGAGATGATAGTGGAGAAGAGAATTTACTCTCCCAACGGCCTTCAAGAGCTTCTGAATTGCTTCCTCCATCTCAATTCTCCTTACCACCACGAAATAATCGTGAAAGCGTTCACTCAAATTTCAAATGAGTTTGAATCGTCCCACCGTCTTTGGAATATGTCTAATAATACGGACTGGAAAAGGCGGTCCGGCGGTGAAGGTTGA MSNIRKNKFFTTIFSSTAGCGGCQKPKLSDIVQPDKKPPTTIVRRSSSSSSTDQNGTFSLDEDYTSSASKSTGTQSPVAILIGDSIAVEKDSDDPYEDFRGSMVEMIVEKRIYSPNGLQELLNCFLHLNSPYHHEIIVKAFTQISNEFESSHRLWNMSNNTDWKRRSGGEG*
BLAST of Csa1G168910 vs. Swiss-Prot
Match: OFP6_ARATH (Transcription repressor OFP6 OS=Arabidopsis thaliana GN=OFP6 PE=1 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 8.4e-21 Identity = 63/151 (41.72%), Postives = 82/151 (54.30%), Query Frame = 1
BLAST of Csa1G168910 vs. Swiss-Prot
Match: OFP8_ARATH (Transcription repressor OFP8 OS=Arabidopsis thaliana GN=OFP8 PE=2 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 4.0e-15 Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = 1
BLAST of Csa1G168910 vs. Swiss-Prot
Match: OFP7_ARATH (Transcription repressor OFP7 OS=Arabidopsis thaliana GN=OFP7 PE=2 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 9.9e-14 Identity = 35/66 (53.03%), Postives = 51/66 (77.27%), Query Frame = 1
BLAST of Csa1G168910 vs. Swiss-Prot
Match: OFP5_ARATH (Transcription repressor OFP5 OS=Arabidopsis thaliana GN=OFP5 PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 4.6e-11 Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 1
BLAST of Csa1G168910 vs. Swiss-Prot
Match: OFP4_ARATH (Transcription repressor OFP4 OS=Arabidopsis thaliana GN=OFP4 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.0e-10 Identity = 45/118 (38.14%), Postives = 60/118 (50.85%), Query Frame = 1
BLAST of Csa1G168910 vs. TrEMBL
Match: A0A0A0LSS9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G168910 PE=4 SV=1) HSP 1 Score: 349.7 bits (896), Expect = 2.0e-93 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1
BLAST of Csa1G168910 vs. TrEMBL
Match: M5WQG3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022029mg PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 5.3e-30 Identity = 83/179 (46.37%), Postives = 112/179 (62.57%), Query Frame = 1
BLAST of Csa1G168910 vs. TrEMBL
Match: B9HQ25_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s16330g PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 9.9e-29 Identity = 83/171 (48.54%), Postives = 103/171 (60.23%), Query Frame = 1
BLAST of Csa1G168910 vs. TrEMBL
Match: A0A0D2SY89_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G150900 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 6.0e-26 Identity = 75/173 (43.35%), Postives = 97/173 (56.07%), Query Frame = 1
BLAST of Csa1G168910 vs. TrEMBL
Match: W9RH46_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016321 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.3e-25 Identity = 80/173 (46.24%), Postives = 98/173 (56.65%), Query Frame = 1
BLAST of Csa1G168910 vs. TAIR10
Match: AT2G36026.1 (AT2G36026.1 Ovate family protein) HSP 1 Score: 107.1 bits (266), Expect = 1.1e-23 Identity = 57/131 (43.51%), Postives = 73/131 (55.73%), Query Frame = 1
BLAST of Csa1G168910 vs. TAIR10
Match: AT3G52525.1 (AT3G52525.1 ovate family protein 6) HSP 1 Score: 101.7 bits (252), Expect = 4.7e-22 Identity = 63/151 (41.72%), Postives = 82/151 (54.30%), Query Frame = 1
BLAST of Csa1G168910 vs. TAIR10
Match: AT5G19650.1 (AT5G19650.1 ovate family protein 8) HSP 1 Score: 82.8 bits (203), Expect = 2.3e-16 Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = 1
BLAST of Csa1G168910 vs. TAIR10
Match: AT2G18500.1 (AT2G18500.1 ovate family protein 7) HSP 1 Score: 78.2 bits (191), Expect = 5.6e-15 Identity = 35/66 (53.03%), Postives = 51/66 (77.27%), Query Frame = 1
BLAST of Csa1G168910 vs. TAIR10
Match: AT4G18830.1 (AT4G18830.1 ovate family protein 5) HSP 1 Score: 69.3 bits (168), Expect = 2.6e-12 Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 1
BLAST of Csa1G168910 vs. NCBI nr
Match: gi|449443652|ref|XP_004139591.1| (PREDICTED: transcription repressor OFP6 [Cucumis sativus]) HSP 1 Score: 349.7 bits (896), Expect = 2.8e-93 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1
BLAST of Csa1G168910 vs. NCBI nr
Match: gi|659127317|ref|XP_008463639.1| (PREDICTED: uncharacterized protein LOC103501739 [Cucumis melo]) HSP 1 Score: 313.9 bits (803), Expect = 1.7e-82 Identity = 156/171 (91.23%), Postives = 163/171 (95.32%), Query Frame = 1
BLAST of Csa1G168910 vs. NCBI nr
Match: gi|645281235|ref|XP_008245527.1| (PREDICTED: uncharacterized protein LOC103343660 [Prunus mume]) HSP 1 Score: 141.0 bits (354), Expect = 2.0e-30 Identity = 83/178 (46.63%), Postives = 113/178 (63.48%), Query Frame = 1
BLAST of Csa1G168910 vs. NCBI nr
Match: gi|595839599|ref|XP_007207871.1| (hypothetical protein PRUPE_ppa022029mg [Prunus persica]) HSP 1 Score: 139.0 bits (349), Expect = 7.5e-30 Identity = 83/179 (46.37%), Postives = 112/179 (62.57%), Query Frame = 1
BLAST of Csa1G168910 vs. NCBI nr
Match: gi|224102859|ref|XP_002312831.1| (hypothetical protein POPTR_0009s16330g [Populus trichocarpa]) HSP 1 Score: 134.8 bits (338), Expect = 1.4e-28 Identity = 83/171 (48.54%), Postives = 103/171 (60.23%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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