Csa1G163150 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G163150
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 10225397 .. 10225850 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCGAAAGCAACAAAAATAAAGGCAGTGATGTAAAAAGAGAAGAGAATATGGGAAATGAGGAAATACAGTAAATAGCGAAATGGTAAAAGGAAAAGGGCATTTTGATGAGGGAGATGGTTAGAGAACAAATATGTTGAGAAGCAAATTAGTTGATTTTCATAGCAAAAGATAGAAAGAACATATAAACGAAGGAAGGAAATGGGGGAAGAGAAGCTTACAGAAAGAGAGAGGCAGCGGAGAAAGCAAGGACAGGAAATCAAAAGGGAGACGTAAGTGGTTGAAGGATGCGAATATTAGGGCAATATATATATATATATATAGAATATATATAAAGAAAGAGGAAGAAAAATGGCTTTTGGAGAATGGTGAAGGCCCAGAGGAGGAAGAGGGAAGAGGGGGGATGAATGGAGAATTTGCCATTTGCGAGGTTCGAAGAGGCGGAGAGTGAAGTAG

mRNA sequence

ATGGGGGAAGAGAAGCTTACAGAAAGAGAGAGGCAGCGGAGAAAGCAAGGACAGGAAATCAAAAGGGAGACGCCCAGAGGAGGAAGAGGGAAGAGGGGGGATGAATGGAGAATTTGCCATTTGCGAGGTTCGAAGAGGCGGAGAGTGAAGTAG

Coding sequence (CDS)

ATGGGGGAAGAGAAGCTTACAGAAAGAGAGAGGCAGCGGAGAAAGCAAGGACAGGAAATCAAAAGGGAGACGCCCAGAGGAGGAAGAGGGAAGAGGGGGGATGAATGGAGAATTTGCCATTTGCGAGGTTCGAAGAGGCGGAGAGTGAAGTAG

Protein sequence

MGEEKLTERERQRRKQGQEIKRETPRGGRGKRGDEWRICHLRGSKRRRVK*
Homology
[Close]
BLAST of Csa1G163150 vs. TrEMBL
Match: A0A0A0LSN7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G163150 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 5.0e-21
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 1 

Query: 1  MGEEKLTERERQRRKQGQEIKRETPRGGRGKRGDEWRICHLRGSKRRRVK 51
          MGEEKLTERERQRRKQGQEIKRETPRGGRGKRGDEWRICHLRGSKRRRVK
Sbjct: 1  MGEEKLTERERQRRKQGQEIKRETPRGGRGKRGDEWRICHLRGSKRRRVK 50

[Close]
BLAST of Csa1G163150 vs. NCBI nr
Match: gi|700209834|gb|KGN64930.1| (hypothetical protein Csa_1G163150 [Cucumis sativus])

HSP 1 Score: 107.5 bits (267), Expect = 7.2e-21
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 1 

Query: 1  MGEEKLTERERQRRKQGQEIKRETPRGGRGKRGDEWRICHLRGSKRRRVK 51
          MGEEKLTERERQRRKQGQEIKRETPRGGRGKRGDEWRICHLRGSKRRRVK
Sbjct: 1  MGEEKLTERERQRRKQGQEIKRETPRGGRGKRGDEWRICHLRGSKRRRVK 50

The following BLAST results are available for this feature:
BLAST of Csa1G163150 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSN7_CUCSA5.0e-21100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G163150 PE=4 SV=1[more]
BLAST of Csa1G163150 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209834|gb|KGN64930.1|7.2e-21100.00hypothetical protein Csa_1G163150 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G163150.1Csa1G163150.1mRNA