Csa1G154070 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G154070
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 10012436 .. 10013366 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGATTTCTTATCCTATTTCACTTTTCATCTTCTCTTCTCAATCTCACACTTCCCTCTCTTCTCCAAACAGCCACTGCCGCCATTACCACCATCGTCGTCCCTCGTGCTCGCCGTGCTCAACCCTTGCCCTCTCCTTGAACAGGATGCAAACCCCTTTTCATCCAAAAAGCCTTCATAGCTAGTAAATTACTTTCTGGTAGATGTAACATTTGGCCATTGTTGTATTGGTAGAGAGAAAGTTAAGGTGCTACAGATACTACTATTTTTGTACTTTATTTCTTAAAATAAGGGATCTAAGGTGTTTGGCACACTTCAAATTTTCTATTTAGTCATACATATTTTTCTCTTTATTTATAATATTTCATATTTTTTATGCAATCATATATGATAAGAGAAGAATGGCCATTATTTAGTGAGAATTGAGATTAATCTTTACTCCTTCATTTCTTCCATAAAATTAAGGTATCTGGTTGTCATAATATTGCAGATATCAAGAAAGCTGAAGCATGAAAATATCATTGAAATATCAAGAAAAAGGGACTTCAATTTTGAACAGATCATACGTTTCTTGATAGAAAGTGAAATCTGTTTTTGTTGAATGAGTTACATGAAAATATTTTAGTGATATAATTGATGATTGTTTCTTACAAAGAAACATATACCAAACCTAGCTTATGGAAAATTAGTTTCACGCATGTGACAATTTCTGATTGCTAGGGTGATATCTTTTTGAGATCCTTGAGGATGATAAATGCCTTCCGGAAGAGCAAGTTCAAGCAATTGCAAAACAGTTGGTAATTCATGAATTTATCTCTTTCCTTGGTCAATGATTATCTTAGTATTATGTTATGAAGACTTTATAGGATCATTCAATTGTATGAAATTTGAATATTCTCTTAACCTGGTTATAACAATAACTTTCAGGTAA

mRNA sequence

ATGCGATTTCTTATCCTATTTCACTTTTCATCTTCTCTTCTCAATCTCACACTTCCCTCTCTTCTCCAAACAGCCACTGCCGCCATTACCACCATCGTCGTCCCTCGTGCTCGCCATGTAACATTTGGCCATTGTTGTATTGGTAGAGAGAAAGTTAAGGGTGATATCTTTTTGAGATCCTTGAGGATGATAAATGCCTTCCGGAAGAGCAAGTTCAAGCAATTGCAAAACAGTTGGTAA

Coding sequence (CDS)

ATGCGATTTCTTATCCTATTTCACTTTTCATCTTCTCTTCTCAATCTCACACTTCCCTCTCTTCTCCAAACAGCCACTGCCGCCATTACCACCATCGTCGTCCCTCGTGCTCGCCATGTAACATTTGGCCATTGTTGTATTGGTAGAGAGAAAGTTAAGGGTGATATCTTTTTGAGATCCTTGAGGATGATAAATGCCTTCCGGAAGAGCAAGTTCAAGCAATTGCAAAACAGTTGGTAA

Protein sequence

MRFLILFHFSSSLLNLTLPSLLQTATAAITTIVVPRARHVTFGHCCIGREKVKGDIFLRSLRMINAFRKSKFKQLQNSW*
Homology
[Close]
BLAST of Csa1G154070 vs. TrEMBL
Match: A0A0A0LSZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G154070 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 1.3e-36
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 1 

Query: 1  MRFLILFHFSSSLLNLTLPSLLQTATAAITTIVVPRARHVTFGHCCIGREKVKGDIFLRS 60
          MRFLILFHFSSSLLNLTLPSLLQTATAAITTIVVPRARHVTFGHCCIGREKVKGDIFLRS
Sbjct: 1  MRFLILFHFSSSLLNLTLPSLLQTATAAITTIVVPRARHVTFGHCCIGREKVKGDIFLRS 60

Query: 61 LRMINAFRKSKFKQLQNSW 80
          LRMINAFRKSKFKQLQNSW
Sbjct: 61 LRMINAFRKSKFKQLQNSW 79

[Close]
BLAST of Csa1G154070 vs. NCBI nr
Match: gi|700209817|gb|KGN64913.1| (hypothetical protein Csa_1G154070 [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 1.9e-36
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 1 

Query: 1  MRFLILFHFSSSLLNLTLPSLLQTATAAITTIVVPRARHVTFGHCCIGREKVKGDIFLRS 60
          MRFLILFHFSSSLLNLTLPSLLQTATAAITTIVVPRARHVTFGHCCIGREKVKGDIFLRS
Sbjct: 1  MRFLILFHFSSSLLNLTLPSLLQTATAAITTIVVPRARHVTFGHCCIGREKVKGDIFLRS 60

Query: 61 LRMINAFRKSKFKQLQNSW 80
          LRMINAFRKSKFKQLQNSW
Sbjct: 61 LRMINAFRKSKFKQLQNSW 79

The following BLAST results are available for this feature:
BLAST of Csa1G154070 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSZ9_CUCSA1.3e-36100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G154070 PE=4 SV=1[more]
BLAST of Csa1G154070 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209817|gb|KGN64913.1|1.9e-36100.00hypothetical protein Csa_1G154070 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU135434cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G154070.1Csa1G154070.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU135434CU135434transcribed_cluster