Csa1G145850 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G145850
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Fatty acyl-CoA reductase; contains IPR016040 (NAD(P)-binding domain), IPR026055 (Fatty acyl-CoA reductase)
Location	Chr1 : 9680217 .. 9681112 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAACCACACCCACAATAAATGAAAGTGAGCCCTACCAAATATATTTATATTTGTTTATATCATTAATATTTTGGCTACTACAATTACATGTCTTCTTCCAACTCAAATACATGAGCATTGTAAGCTCTACCTCCAATAGGATAATACACCTATGTACATGGTTAACCAAATATTTCTTCCTCTCATACCTAGTAGAGTACTAATTTGTTCAATATTGACTATACTGAATGAATATTTGAAATTTAATTGTTGATTTTGTTTGGTTAGCTTATGTTAGTGGCGTGAAGGAAGGGCTAATACTTGAATCCCCATATGTTATGGGAGACACTCTAAATGGAAAATGTGGCCTACAAATTGAAGATGAGTTAAAGCTTGTGGATCACAAACTATCTGACCTTCGAGCTGAGGGAGCTACCCAGCAATCCATCACTTTGACCATGAAAGATTTGGGTATACAAAGGTTGGTATATCTATCTCTATATAAAGCACTATCATTTTTTTATTTCAACATTATTAAAATCCGTAAACTTGTGGATACAAAAATAATAATTTTTTTCTAAATTTTGGGTTTAGTTTAAATAATTTTATTTTTACAAAAAATAATAAATATGGGTTATGAATATACTTCATTTATACAAATTCGATGAACGAGAACGAATTATGAATGGAATTGAACAGGTCACAAAATTATGGGTGGACAAACACATACGTATTTACAAAAGCAATGGGAGAAATGTTGATATCAGAATTAAAGGAAAATATTCCTGTGGTTATTATACGTCCTACTATTGTTTCAAGTACTTACAAAGAACCATTTCCTGGCTGGGTCGAAGGTGTAAGGTATGCATTTTACATTTCCAAATACTTCATTATATACTTTCATTTTGAATAA

mRNA sequence

ATGAAAACCACACCCACAATAAATGAAACTTATGTTAGTGGCGTGAAGGAAGGGCTAATACTTGAATCCCCATATGTTATGGGAGACACTCTAAATGGAAAATGTGGCCTACAAATTGAAGATGAGTTAAAGCTTGTGGATCACAAACTATCTGACCTTCGAGCTGAGGGAGCTACCCAGCAATCCATCACTTTGACCATGAAAGATTTGGGTATACAAAGGTCACAAAATTATGGGTGGACAAACACATACGTATTTACAAAAGCAATGGGAGAAATGTTGATATCAGAATTAAAGGAAAATATTCCTGTGGTTATTATACGTCCTACTATTGTTTCAAGTACTTACAAAGAACCATTTCCTGGCTGGGTCGAAGGTGTAAGGTATGCATTTTACATTTCCAAATACTTCATTATATACTTTCATTTTGAATAA

Coding sequence (CDS)

ATGAAAACCACACCCACAATAAATGAAACTTATGTTAGTGGCGTGAAGGAAGGGCTAATACTTGAATCCCCATATGTTATGGGAGACACTCTAAATGGAAAATGTGGCCTACAAATTGAAGATGAGTTAAAGCTTGTGGATCACAAACTATCTGACCTTCGAGCTGAGGGAGCTACCCAGCAATCCATCACTTTGACCATGAAAGATTTGGGTATACAAAGGTCACAAAATTATGGGTGGACAAACACATACGTATTTACAAAAGCAATGGGAGAAATGTTGATATCAGAATTAAAGGAAAATATTCCTGTGGTTATTATACGTCCTACTATTGTTTCAAGTACTTACAAAGAACCATTTCCTGGCTGGGTCGAAGGTGTAAGGTATGCATTTTACATTTCCAAATACTTCATTATATACTTTCATTTTGAATAA

Protein sequence

MKTTPTINETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQQSITLTMKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPFPGWVEGVRYAFYISKYFIIYFHFE*

Homology

[Close]

BLAST of Csa1G145850 vs. Swiss-Prot
Match: FAR_SIMCH (Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis PE=1 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 4.0e-40
Identity = 76/131 (58.02%), Postives = 102/131 (77.86%), Query Frame = 1


Query: 7   INETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQQSITLT 66
           ++  YVSG K GLILE PY MG++LNG+ GL I  E KLV+ K+++L+A GAT++SI  T
Sbjct: 161 VSTAYVSGEKNGLILEKPYYMGESLNGRLGLDINVEKKLVEAKINELQAAGATEKSIKST 220

Query: 67  MKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPFPGWVEG 126
           MKD+GI+R++++GW N YVFTKA+GEML+ + K +IP+ IIRPTI++ST+KEPFPGWVEG
Sbjct: 221 MKDMGIERARHWGWPNVYVFTKALGEMLLMQYKGDIPLTIIRPTIITSTFKEPFPGWVEG 280

Query: 127 VRYAFYISKYF 138
           VR    +  Y+
Sbjct: 281 VRTIDNVPVYY 291

[Close]

BLAST of Csa1G145850 vs. Swiss-Prot
Match: FACR3_ARATH (Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.4e-37
Identity = 71/122 (58.20%), Postives = 92/122 (75.41%), Query Frame = 1


Query: 7   INETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQQSITLT 66
           ++  YV G K GLI+E+PY MG+TLNG  GL I  E KLV  KL  LR  GA  ++IT T
Sbjct: 164 VSTAYVCGEKSGLIMETPYRMGETLNGTTGLDINYEKKLVQEKLDQLRVIGAAPETITET 223

Query: 67  MKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPFPGWVEG 126
           MKDLG++R++ YGW NTYVFTKAMGEM++   +EN+ +V++RP+I++ST+KEPFPGW EG
Sbjct: 224 MKDLGLRRAKMYGWPNTYVFTKAMGEMMVGTKRENLSLVLLRPSIITSTFKEPFPGWTEG 283

Query: 127 VR 129
           +R
Sbjct: 284 IR 285

[Close]

BLAST of Csa1G145850 vs. Swiss-Prot
Match: FACR4_ARATH (Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana GN=FAR4 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.6e-33
Identity = 62/122 (50.82%), Postives = 91/122 (74.59%), Query Frame = 1


Query: 7   INETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQQSITLT 66
           ++  YV G K GL+ E  + MG+TLNG   L IE E++L+  KL +L+ +  +++ I+ +
Sbjct: 160 VSTAYVRGEKSGLLHEKTFHMGETLNGHRKLVIETEMELMKQKLKELQKQNCSEEEISQS 219

Query: 67  MKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPFPGWVEG 126
           MKDLG+ R++ +GW NTYVFTK+MGEML+   +EN+P+VIIRPT+++ST+ EPFPGW+EG
Sbjct: 220 MKDLGMSRAKLHGWPNTYVFTKSMGEMLLGNYRENLPIVIIRPTMITSTFSEPFPGWIEG 279

Query: 127 VR 129
           +R
Sbjct: 280 LR 281

[Close]

BLAST of Csa1G145850 vs. Swiss-Prot
Match: FACR7_ARATH (Putative fatty acyl-CoA reductase 7 OS=Arabidopsis thaliana GN=FAR7 PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 9.8e-31
Identity = 57/122 (46.72%), Postives = 84/122 (68.85%), Query Frame = 1


Query: 7   INETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQQSITLT 66
           ++  YV G + G I+E  + MG++LNGK  + I  E +L D K    + +G +++     
Sbjct: 87  VSTVYVCGERPGHIVEKHFAMGESLNGKNKVDINTERRLADQKSKQFKEQGCSEEETEQA 146

Query: 67  MKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPFPGWVEG 126
           MKD G++R++ YGW NTYVFTKAMGEML+   +E +P+VIIRPTI++ST+ +PFPGW+EG
Sbjct: 147 MKDFGLKRARLYGWPNTYVFTKAMGEMLLGHYRETMPIVIIRPTIITSTFSDPFPGWIEG 206

Query: 127 VR 129
           ++
Sbjct: 207 LK 208

[Close]

BLAST of Csa1G145850 vs. Swiss-Prot
Match: FACR1_ARATH (Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana GN=FAR1 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.7e-30
Identity = 61/122 (50.00%), Postives = 88/122 (72.13%), Query Frame = 1


Query: 7   INETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQQSITLT 66
           ++  Y+SG + GL+LE P+ MG+TL+G   L I  E  L+  KL +L  +  + + I+ T
Sbjct: 160 VSTAYISGEQPGLLLEKPFKMGETLSGDRELDINIEHDLMKQKLKEL--QDCSDEEISQT 219

Query: 67  MKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPFPGWVEG 126
           MKD G+ R++ +GW NTYVFTKAMGEML+ + +EN+P+VIIRPT+++ST  EPFPGW+EG
Sbjct: 220 MKDFGMARAKLHGWPNTYVFTKAMGEMLMGKYRENLPLVIIRPTMITSTIAEPFPGWIEG 279

Query: 127 VR 129
           ++
Sbjct: 280 LK 279

[Close]

BLAST of Csa1G145850 vs. TrEMBL
Match: A0A0A0LSW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G145850 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.1e-76
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1


Query: 1   MKTTPTINETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQ 60
           MKTTPTINETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQ
Sbjct: 1   MKTTPTINETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQ 60

Query: 61  QSITLTMKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPF 120
           QSITLTMKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPF
Sbjct: 61  QSITLTMKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPF 120

Query: 121 PGWVEGVRYAFYISKYFIIYFHFE 145
           PGWVEGVRYAFYISKYFIIYFHFE
Sbjct: 121 PGWVEGVRYAFYISKYFIIYFHFE 144

[Close]

BLAST of Csa1G145850 vs. TrEMBL
Match: B9HQW5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s14720g PE=4 SV=2)

HSP 1 Score: 175.6 bits (444), Expect = 4.3e-41
Identity = 82/128 (64.06%), Postives = 106/128 (82.81%), Query Frame = 1


Query: 1   MKTTPTINETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQ 60
           +K    ++  +VSG + GLILE+PY +GDTLNG CGL I++E KLVD KL++L+AEGAT 
Sbjct: 155 LKVLVHVSTAFVSGERAGLILETPYGVGDTLNGVCGLDIDEEKKLVDQKLNELQAEGATA 214

Query: 61  QSITLTMKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPF 120
           ++I   MKD+G++R++ YGW NTYVFTKAMGEML+  LKE++ VVIIRPTIV+STY+EPF
Sbjct: 215 EAIKDAMKDMGMERAKVYGWPNTYVFTKAMGEMLVGHLKEDLSVVIIRPTIVTSTYEEPF 274

Query: 121 PGWVEGVR 129
           PGWVEGVR
Sbjct: 275 PGWVEGVR 282

[Close]

BLAST of Csa1G145850 vs. TrEMBL
Match: M5WHQ7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004817mg PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 4.3e-41
Identity = 80/128 (62.50%), Postives = 103/128 (80.47%), Query Frame = 1


Query: 1   MKTTPTINETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQ 60
           +K    ++  YV G K+GL+LE+PY MG+TLNG  GL I+ E++ V  KL +LRAEG T+
Sbjct: 154 LKVLVHVSTAYVCGEKDGLLLENPYHMGETLNGTSGLDIDSEIRQVQEKLRELRAEGLTE 213

Query: 61  QSITLTMKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPF 120
           Q+IT  +KD G++R+  YGW NTYVFTKAMGEMLI +LKEN+P+VI+RPTI++STYKEPF
Sbjct: 214 QTITSDLKDFGLKRANIYGWPNTYVFTKAMGEMLIGDLKENLPLVIVRPTIITSTYKEPF 273

Query: 121 PGWVEGVR 129
           PGWVEGVR
Sbjct: 274 PGWVEGVR 281

[Close]

BLAST of Csa1G145850 vs. TrEMBL
Match: W9R5G3_9ROSA (Fatty acyl-CoA reductase 3 OS=Morus notabilis GN=L484_022372 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 7.3e-41
Identity = 83/128 (64.84%), Postives = 102/128 (79.69%), Query Frame = 1


Query: 1   MKTTPTINETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQ 60
           +K    ++  YVSG K GLILE+PY MGDTLNG  GL I++E++LV+ KL  L+AE A++
Sbjct: 154 LKILVHVSTAYVSGEKGGLILENPYHMGDTLNGATGLDIDNEVRLVEAKLKQLQAEEASE 213

Query: 61  QSITLTMKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPF 120
             ITL MKD GIQR+  YGW NTYVFTKAMGEM++  LKEN+ VVIIRPTI++STYKEPF
Sbjct: 214 AEITLAMKDFGIQRANKYGWPNTYVFTKAMGEMVLGHLKENVNVVIIRPTIITSTYKEPF 273

Query: 121 PGWVEGVR 129
           PGWVEG+R
Sbjct: 274 PGWVEGLR 281

[Close]

BLAST of Csa1G145850 vs. TrEMBL
Match: D7TCY0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00120 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 7.3e-41
Identity = 78/122 (63.93%), Postives = 103/122 (84.43%), Query Frame = 1


Query: 7   INETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQQSITLT 66
           ++  YV+G + GLILE P+ MG+TLNG  GL IE+E KL++ +L +L++EGAT++++TL 
Sbjct: 160 VSTAYVAGEQSGLILEQPFQMGETLNGTFGLDIEEEKKLMEERLDELQSEGATREAVTLA 219

Query: 67  MKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPFPGWVEG 126
           MKD GIQR++ +GW NTYVFTKAMGEML+  LKEN+P+ I+RPTIVSSTYKEPFPGWVEG
Sbjct: 220 MKDFGIQRAKMHGWPNTYVFTKAMGEMLLGHLKENLPLAILRPTIVSSTYKEPFPGWVEG 279

Query: 127 VR 129
           +R
Sbjct: 280 IR 281

[Close]

BLAST of Csa1G145850 vs. TAIR10
Match: AT4G33790.1 (AT4G33790.1 Jojoba acyl CoA reductase-related male sterility protein)

HSP 1 Score: 157.1 bits (396), Expect = 8.0e-39
Identity = 71/122 (58.20%), Postives = 92/122 (75.41%), Query Frame = 1


Query: 7   INETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQQSITLT 66
           ++  YV G K GLI+E+PY MG+TLNG  GL I  E KLV  KL  LR  GA  ++IT T
Sbjct: 164 VSTAYVCGEKSGLIMETPYRMGETLNGTTGLDINYEKKLVQEKLDQLRVIGAAPETITET 223

Query: 67  MKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPFPGWVEG 126
           MKDLG++R++ YGW NTYVFTKAMGEM++   +EN+ +V++RP+I++ST+KEPFPGW EG
Sbjct: 224 MKDLGLRRAKMYGWPNTYVFTKAMGEMMVGTKRENLSLVLLRPSIITSTFKEPFPGWTEG 283

Query: 127 VR 129
           +R
Sbjct: 284 IR 285

[Close]

BLAST of Csa1G145850 vs. TAIR10
Match: AT3G44540.1 (AT3G44540.1 fatty acid reductase 4)

HSP 1 Score: 142.5 bits (358), Expect = 2.0e-34
Identity = 62/122 (50.82%), Postives = 91/122 (74.59%), Query Frame = 1


Query: 7   INETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQQSITLT 66
           ++  YV G K GL+ E  + MG+TLNG   L IE E++L+  KL +L+ +  +++ I+ +
Sbjct: 160 VSTAYVRGEKSGLLHEKTFHMGETLNGHRKLVIETEMELMKQKLKELQKQNCSEEEISQS 219

Query: 67  MKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPFPGWVEG 126
           MKDLG+ R++ +GW NTYVFTK+MGEML+   +EN+P+VIIRPT+++ST+ EPFPGW+EG
Sbjct: 220 MKDLGMSRAKLHGWPNTYVFTKSMGEMLLGNYRENLPIVIIRPTMITSTFSEPFPGWIEG 279

Query: 127 VR 129
           +R
Sbjct: 280 LR 281

[Close]

BLAST of Csa1G145850 vs. TAIR10
Match: AT5G22420.1 (AT5G22420.1 fatty acid reductase 7)

HSP 1 Score: 134.4 bits (337), Expect = 5.5e-32
Identity = 57/122 (46.72%), Postives = 84/122 (68.85%), Query Frame = 1


Query: 7   INETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQQSITLT 66
           ++  YV G + G I+E  + MG++LNGK  + I  E +L D K    + +G +++     
Sbjct: 87  VSTVYVCGERPGHIVEKHFAMGESLNGKNKVDINTERRLADQKSKQFKEQGCSEEETEQA 146

Query: 67  MKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPFPGWVEG 126
           MKD G++R++ YGW NTYVFTKAMGEML+   +E +P+VIIRPTI++ST+ +PFPGW+EG
Sbjct: 147 MKDFGLKRARLYGWPNTYVFTKAMGEMLLGHYRETMPIVIIRPTIITSTFSDPFPGWIEG 206

Query: 127 VR 129
           ++
Sbjct: 207 LK 208

[Close]

BLAST of Csa1G145850 vs. TAIR10
Match: AT5G22500.1 (AT5G22500.1 fatty acid reductase 1)

HSP 1 Score: 132.5 bits (332), Expect = 2.1e-31
Identity = 61/122 (50.00%), Postives = 88/122 (72.13%), Query Frame = 1


Query: 7   INETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQQSITLT 66
           ++  Y+SG + GL+LE P+ MG+TL+G   L I  E  L+  KL +L  +  + + I+ T
Sbjct: 160 VSTAYISGEQPGLLLEKPFKMGETLSGDRELDINIEHDLMKQKLKEL--QDCSDEEISQT 219

Query: 67  MKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPFPGWVEG 126
           MKD G+ R++ +GW NTYVFTKAMGEML+ + +EN+P+VIIRPT+++ST  EPFPGW+EG
Sbjct: 220 MKDFGMARAKLHGWPNTYVFTKAMGEMLMGKYRENLPLVIIRPTMITSTIAEPFPGWIEG 279

Query: 127 VR 129
           ++
Sbjct: 280 LK 279

[Close]

BLAST of Csa1G145850 vs. TAIR10
Match: AT3G44550.1 (AT3G44550.1 fatty acid reductase 5)

HSP 1 Score: 131.0 bits (328), Expect = 6.1e-31
Identity = 61/124 (49.19%), Postives = 91/124 (73.39%), Query Frame = 1


Query: 7   INETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELK--LVDHKLSDLRAEGATQQSIT 66
           ++  YV G K GLI E P++M +  N   GLQ++  L+  L+  +L +L  +  +++ IT
Sbjct: 160 VSTAYVCGEKPGLIPEKPFIMEEIRNEN-GLQLDINLERELMKQRLKELNEQDCSEEDIT 219

Query: 67  LTMKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPFPGWV 126
           L+MK+LG++R++ +GW NTYVFTK+MGEML+ + KEN+P+VIIRPT+++ST  EPFPGW+
Sbjct: 220 LSMKELGMERAKLHGWPNTYVFTKSMGEMLLGKHKENLPLVIIRPTMITSTLSEPFPGWI 279

Query: 127 EGVR 129
           EG+R
Sbjct: 280 EGLR 282

[Close]

BLAST of Csa1G145850 vs. NCBI nr
Match: gi|700209787|gb|KGN64883.1| (hypothetical protein Csa_1G145850 [Cucumis sativus])

HSP 1 Score: 293.9 bits (751), Expect = 1.5e-76
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1


Query: 1   MKTTPTINETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQ 60
           MKTTPTINETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQ
Sbjct: 1   MKTTPTINETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQ 60

Query: 61  QSITLTMKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPF 120
           QSITLTMKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPF
Sbjct: 61  QSITLTMKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPF 120

Query: 121 PGWVEGVRYAFYISKYFIIYFHFE 145
           PGWVEGVRYAFYISKYFIIYFHFE
Sbjct: 121 PGWVEGVRYAFYISKYFIIYFHFE 144

[Close]

BLAST of Csa1G145850 vs. NCBI nr
Match: gi|449443606|ref|XP_004139568.1| (PREDICTED: LOW QUALITY PROTEIN: fatty acyl-CoA reductase 3 [Cucumis sativus])

HSP 1 Score: 240.4 bits (612), Expect = 2.0e-60
Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 1


Query: 7   INETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQQSITLT 66
           ++  YVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQQSITLT
Sbjct: 161 VSTAYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQQSITLT 220

Query: 67  MKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPFPGWVEG 126
           MKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPFPGWVEG
Sbjct: 221 MKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPFPGWVEG 280

Query: 127 VR 129
           VR
Sbjct: 281 VR 282

[Close]

BLAST of Csa1G145850 vs. NCBI nr
Match: gi|659071834|ref|XP_008462137.1| (PREDICTED: fatty acyl-CoA reductase 3-like isoform X1 [Cucumis melo])

HSP 1 Score: 221.9 bits (564), Expect = 7.5e-55
Identity = 107/122 (87.70%), Postives = 116/122 (95.08%), Query Frame = 1


Query: 7   INETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQQSITLT 66
           ++  YV GVKEGLILES Y MGDTLNGKCGLQIEDEL LVD+K+SDLRA+GATQQSITLT
Sbjct: 161 VSTAYVCGVKEGLILESQYNMGDTLNGKCGLQIEDELNLVDYKISDLRAKGATQQSITLT 220

Query: 67  MKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPFPGWVEG 126
           MK++G++RSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPFPGWVEG
Sbjct: 221 MKEMGLERSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPFPGWVEG 280

Query: 127 VR 129
           VR
Sbjct: 281 VR 282

[Close]

BLAST of Csa1G145850 vs. NCBI nr
Match: gi|659071836|ref|XP_008462145.1| (PREDICTED: fatty acyl-CoA reductase 3-like isoform X2 [Cucumis melo])

HSP 1 Score: 221.9 bits (564), Expect = 7.5e-55
Identity = 107/122 (87.70%), Postives = 116/122 (95.08%), Query Frame = 1


Query: 7   INETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQQSITLT 66
           ++  YV GVKEGLILES Y MGDTLNGKCGLQIEDEL LVD+K+SDLRA+GATQQSITLT
Sbjct: 161 VSTAYVCGVKEGLILESQYNMGDTLNGKCGLQIEDELNLVDYKISDLRAKGATQQSITLT 220

Query: 67  MKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPFPGWVEG 126
           MK++G++RSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPFPGWVEG
Sbjct: 221 MKEMGLERSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPFPGWVEG 280

Query: 127 VR 129
           VR
Sbjct: 281 VR 282

[Close]

BLAST of Csa1G145850 vs. NCBI nr
Match: gi|694403273|ref|XP_009376588.1| (PREDICTED: fatty acyl-CoA reductase 3-like [Pyrus x bretschneideri])

HSP 1 Score: 180.3 bits (456), Expect = 2.5e-42
Identity = 84/128 (65.62%), Postives = 106/128 (82.81%), Query Frame = 1


Query: 1   MKTTPTINETYVSGVKEGLILESPYVMGDTLNGKCGLQIEDELKLVDHKLSDLRAEGATQ 60
           +K    ++  YV G KEGL+LE+ Y MG+TLNG  GL I++E+KLV  KL +LRAEGA++
Sbjct: 154 LKVLVHVSTAYVCGEKEGLLLENAYRMGETLNGTTGLDIDNEIKLVQEKLKELRAEGASE 213

Query: 61  QSITLTMKDLGIQRSQNYGWTNTYVFTKAMGEMLISELKENIPVVIIRPTIVSSTYKEPF 120
           Q+ITL +KD G++R+  +GW NTYVFTKAMGEMLI +LKEN+PVVIIRPTI+SSTYKEPF
Sbjct: 214 QAITLALKDFGLKRAIVHGWPNTYVFTKAMGEMLIGDLKENLPVVIIRPTIISSTYKEPF 273

Query: 121 PGWVEGVR 129
           PGWVEG+R
Sbjct: 274 PGWVEGIR 281

The following BLAST results are available for this feature:

BLAST of Csa1G145850 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FAR_SIMCH	4.0e-40	58.02	Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis PE=1 SV=1	[more]
FACR3_ARATH	1.4e-37	58.20	Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2 SV=1	[more]
FACR4_ARATH	3.6e-33	50.82	Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana GN=FAR4 PE=2 SV=1	[more]
FACR7_ARATH	9.8e-31	46.72	Putative fatty acyl-CoA reductase 7 OS=Arabidopsis thaliana GN=FAR7 PE=3 SV=1	[more]
FACR1_ARATH	3.7e-30	50.00	Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana GN=FAR1 PE=2 SV=1	[more]

BLAST of Csa1G145850 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSW6_CUCSA	1.1e-76	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G145850 PE=4 SV=1	[more]
B9HQW5_POPTR	4.3e-41	64.06	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s14720g PE=4 SV=2	[more]
M5WHQ7_PRUPE	4.3e-41	62.50	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004817mg PE=4 SV=1	[more]
W9R5G3_9ROSA	7.3e-41	64.84	Fatty acyl-CoA reductase 3 OS=Morus notabilis GN=L484_022372 PE=4 SV=1	[more]
D7TCY0_VITVI	7.3e-41	63.93	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00120 PE=4 SV=...	[more]

BLAST of Csa1G145850 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33790.1	8.0e-39	58.20	Jojoba acyl CoA reductase-related male sterility protein	[more]
AT3G44540.1	2.0e-34	50.82	fatty acid reductase 4	[more]
AT5G22420.1	5.5e-32	46.72	fatty acid reductase 7	[more]
AT5G22500.1	2.1e-31	50.00	fatty acid reductase 1	[more]
AT3G44550.1	6.1e-31	49.19	fatty acid reductase 5	[more]

BLAST of Csa1G145850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700209787\|gb\|KGN64883.1\|	1.5e-76	100.00	hypothetical protein Csa_1G145850 [Cucumis sativus]	[more]
gi\|449443606\|ref\|XP_004139568.1\|	2.0e-60	96.72	PREDICTED: LOW QUALITY PROTEIN: fatty acyl-CoA reductase 3 [Cucumis sativus]	[more]
gi\|659071834\|ref\|XP_008462137.1\|	7.5e-55	87.70	PREDICTED: fatty acyl-CoA reductase 3-like isoform X1 [Cucumis melo]	[more]
gi\|659071836\|ref\|XP_008462145.1\|	7.5e-55	87.70	PREDICTED: fatty acyl-CoA reductase 3-like isoform X2 [Cucumis melo]	[more]
gi\|694403273\|ref\|XP_009376588.1\|	2.5e-42	65.63	PREDICTED: fatty acyl-CoA reductase 3-like [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013120	Male_sterile_NAD-bd
IPR016040	NAD(P)-bd_dom
IPR026055	FAR

Vocabulary: **Molecular Function**
Term	Definition
GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0010025	wax biosynthetic process
cellular_component	GO:0005783	endoplasmic reticulum
molecular_function	GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G145850.1	Csa1G145850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013120	Male sterility, NAD-binding	PFAM	PF07993	NAD_binding_4	coord: 10..133 score: 2.6
IPR016040	NAD(P)-binding domain	GENE3D	G3DSA:3.40.50.720		coord: 72..119 score: 1.
IPR016040	NAD(P)-binding domain	unknown	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 77..134 score: 1.7
IPR026055	Fatty acyl-CoA reductase	PANTHER	PTHR11011	MALE STERILITY PROTEIN 2-RELATED	coord: 11..35 score: 1.9E-51coord: 60..128 score: 1.9
None	No IPR available	PANTHER	PTHR11011:SF40	SUBFAMILY NOT NAMED	coord: 11..35 score: 1.9E-51coord: 60..128 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G145850	MELO3C004822	Melon (DHL92) v3.5.1	cumeB015
Csa1G145850	Cucsa.200140	Cucumber (Gy14) v1	cgycuB305

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G145850	Watermelon (97103) v2	cuwmbB009
Csa1G145850	Watermelon (97103) v2	cuwmbB026
Csa1G145850	Wax gourd	cuwgoB049
Csa1G145850	Cucurbita maxima (Rimu)	cmacuB163
Csa1G145850	Cucurbita maxima (Rimu)	cmacuB203
Csa1G145850	Cucurbita maxima (Rimu)	cmacuB579
Csa1G145850	Cucurbita moschata (Rifu)	cmocuB148
Csa1G145850	Cucurbita moschata (Rifu)	cmocuB188
Csa1G145850	Watermelon (Charleston Gray)	cuwcgB024
Csa1G145850	Watermelon (Charleston Gray)	cuwcgB028
Csa1G145850	Watermelon (97103) v1	cuwmB045
Csa1G145850	Watermelon (97103) v1	cuwmB065
Csa1G145850	Cucurbita pepo (Zucchini)	cpecuB516
Csa1G145850	Cucurbita pepo (Zucchini)	cpecuB808
Csa1G145850	Bottle gourd (USVL1VR-Ls)	culsiB005
Csa1G145850	Bottle gourd (USVL1VR-Ls)	culsiB044
Csa1G145850	Cucumber (Gy14) v2	cgybcuB001
Csa1G145850	Melon (DHL92) v3.6.1	cumedB010
Csa1G145850	Silver-seed gourd	carcuB0185