Csa1G134270 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G134270
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Yellow-leaf-specific gene 9; contains IPR004864 (Late embryogenesis abundant protein, LEA-14)
Location	Chr1 : 9507136 .. 9508450 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAGAAAATATATCAAAACCACCGAAAAGTGAAAAAGTGCTGAAAAGAAAAAAACAGATGAGGAGCAATGGTAAAGCAGGAGAACCACCACCACCACCATCATCATCATCATCAAAAGAAATGTCCTATGTAATAAAACATGGGACCGCAAAAAGAACAAGGGTGTTGAGAATCACAGGAAGAACCTTATTGGGTTTAATGATTCTTGTGGCTATCGCAATGATTATATGTTGGCTTATTGTGTTTCCCAGAAACCCAGATATCATTGTGGAAACTGGCCAAGTTATACCCCATAGTTTAACTGATAGAAAGTTGAATGCGACCATAGCTTTTACTGTTACAAGCTATAACCCTAACAAAAAAGCCTCCATTCGTATGGATTCCATGAGGATGATAGTTAGTGATATGGGGTTGTCGTTTTGGTCCGACATCCCCAGCTTCACCCAGCCACCGAAAAACAAAACCGTCTTGACCTCCACCATCCAAGGCAACTTCATTTACCCATTTGGCCACATGAAAGAATTGATGAAGTTGGAGGGTATCAGTCCGGAGCTTCGCTTCTCGGCTAAAGTCAGGTAAAACCATTTGACTATATGTTTGTTTGTTTTTTTTTTTTTAATTCAAAATTTGTATTCTTTTTAGTTCTACAACTTAAAATCAAATTTTTAAAAATCTTAAATTTAGTATCTCAAACCTAATTTCTACCGAATTTGATTAAATACCAATAATAGTTTCCACTCATGAAAGTGTGAATTTGTACACTTTCAAAATTTATAATAAAAATGTTAATATATAACAAAAAGATAAAATTTAAATCAACAATAAACTAAGTGACACAAGAGAGTTCAAATGAACAACTTTACTTTCCCTCAAATTTGAAGTAATACCTTGTTTCTATTTTTAAGTACTAACAAGATGACCATTATTTTTTTGCTTTATTTTTAGATTTTGATAATTAAGCTTGTGTATATTACTTTTACAATATACATCAATTTTGTTATTTATAAATGTTTTCATATGCTATTTAAGTTATTTTTTAGTTTTTTAACATATAGTTTTGGTGTAAATTAAACATTTTTTTTGGTGTTCTTATCAGTTACATTATGGAGAGATGGACATCGAGAGATCGGTTGGTGGAGGTTTATTGTGATAGCCTTAGGCTTAAGTTCAATGATTCTACAGTTTTTGATAATAAAAAATGTAAAGTTGATCTATGAGATTTTCATCTTGTTGTGTTCTTCTTGCTCAATAATGATCCCAAAGATTTGTAACTCAAAGTTTTAATTGTGTTATTTTTATGAATAGAGAGAGTT

mRNA sequence

ATGAGGAGCAATGGTAAAGCAGGAGAACCACCACCACCACCATCATCATCATCATCAAAAGAAATGTCCTATGTAATAAAACATGGGACCGCAAAAAGAACAAGGGTGTTGAGAATCACAGGAAGAACCTTATTGGGTTTAATGATTCTTGTGGCTATCGCAATGATTATATGTTGGCTTATTGTGTTTCCCAGAAACCCAGATATCATTGTGGAAACTGGCCAAGTTATACCCCATAGTTTAACTGATAGAAAGTTGAATGCGACCATAGCTTTTACTGTTACAAGCTATAACCCTAACAAAAAAGCCTCCATTCGTATGGATTCCATGAGGATGATAGTTAGTGATATGGGGTTGTCGTTTTGGTCCGACATCCCCAGCTTCACCCAGCCACCGAAAAACAAAACCGTCTTGACCTCCACCATCCAAGGCAACTTCATTTACCCATTTGGCCACATGAAAGAATTGATGAAGTTGGAGGGTATCAGTCCGGAGCTTCGCTTCTCGGCTAAAGTCAGTTACATTATGGAGAGATGGACATCGAGAGATCGGTTGGTGGAGGTTTATTGTGATAGCCTTAGGCTTAAGTTCAATGATTCTACAGTTTTTGATAATAAAAAATGTAAAGTTGATCTATGA

Coding sequence (CDS)

ATGAGGAGCAATGGTAAAGCAGGAGAACCACCACCACCACCATCATCATCATCATCAAAAGAAATGTCCTATGTAATAAAACATGGGACCGCAAAAAGAACAAGGGTGTTGAGAATCACAGGAAGAACCTTATTGGGTTTAATGATTCTTGTGGCTATCGCAATGATTATATGTTGGCTTATTGTGTTTCCCAGAAACCCAGATATCATTGTGGAAACTGGCCAAGTTATACCCCATAGTTTAACTGATAGAAAGTTGAATGCGACCATAGCTTTTACTGTTACAAGCTATAACCCTAACAAAAAAGCCTCCATTCGTATGGATTCCATGAGGATGATAGTTAGTGATATGGGGTTGTCGTTTTGGTCCGACATCCCCAGCTTCACCCAGCCACCGAAAAACAAAACCGTCTTGACCTCCACCATCCAAGGCAACTTCATTTACCCATTTGGCCACATGAAAGAATTGATGAAGTTGGAGGGTATCAGTCCGGAGCTTCGCTTCTCGGCTAAAGTCAGTTACATTATGGAGAGATGGACATCGAGAGATCGGTTGGTGGAGGTTTATTGTGATAGCCTTAGGCTTAAGTTCAATGATTCTACAGTTTTTGATAATAAAAAATGTAAAGTTGATCTATGA

Protein sequence

MRSNGKAGEPPPPPSSSSSKEMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKNKTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFNDSTVFDNKKCKVDL*

Homology

[Close]

BLAST of Csa1G134270 vs. Swiss-Prot
Match: YLS9_ARATH (Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.4e-09
Identity = 57/199 (28.64%), Postives = 87/199 (43.72%), Query Frame = 1


Query: 10  PPPPPSSSSSKEMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDI 69
           PPP P         Y   HG      +L +  + ++ L++++ +A +I WLIV PR    
Sbjct: 17  PPPAPKGY------YRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKF 76

Query: 70  IVETGQV--IPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWS-DIP 129
            V    +    H+  D  L   +A TV   NPNK+  +  D +       G  F +  + 
Sbjct: 77  HVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLT 136

Query: 130 SFTQPPKNKTVLTSTIQGN--FIYPFGHMKEL--MKLEGI-SPELRFSAKVSYIMERWTS 189
            F Q  KN TVLT T QG    I+  G  + L   ++ G+ + E++F  +V + +     
Sbjct: 137 PFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKF 196

Query: 190 RDRLVEVYCDSLRLKFNDS 201
           R    +V CD LRL  + S
Sbjct: 197 RRIKPKVDCDDLRLPLSTS 209

[Close]

BLAST of Csa1G134270 vs. Swiss-Prot
Match: Y1816_ARATH (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 7.0e-09
Identity = 55/183 (30.05%), Postives = 87/183 (47.54%), Query Frame = 1


Query: 39  ITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSL--TDRKLNATIAFTVTS 98
           I    LLGL  LV +A++I +L + P+     VE   V   ++   D  +NA  ++ + S
Sbjct: 41  IVALVLLGL--LVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKS 100

Query: 99  YNPNKKASIRMDSMRMIVSDMGLSF-WSDIPSFTQPPKNKT-VLTSTIQGNFIYPFGHMK 158
           YNP K  S+R  SMR+  +    S    +I  F Q PKN+T + T  +  N      + +
Sbjct: 101 YNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNAR 160

Query: 159 ELM--KLEG-ISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFNDSTV--FDNKKCK 213
           +L   K +G I  E+  +A+VSY    + SR R ++  C  + +    S++  F    CK
Sbjct: 161 DLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCK 220

[Close]

BLAST of Csa1G134270 vs. TrEMBL
Match: A0A0A0LSV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G134270 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 1.6e-116
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 1


Query: 1   MRSNGKAGEPPPPPSSSSSKEMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWL 60
           MRSNGKAGEPPPPPSSSSSKEMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWL
Sbjct: 1   MRSNGKAGEPPPPPSSSSSKEMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWL 60

Query: 61  IVFPRNPDIIVETGQVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLS 120
           IVFPRNPDIIVETGQVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLS
Sbjct: 61  IVFPRNPDIIVETGQVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLS 120

Query: 121 FWSDIPSFTQPPKNKTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWT 180
           FWSDIPSFTQPPKNKTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWT
Sbjct: 121 FWSDIPSFTQPPKNKTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWT 180

Query: 181 SRDRLVEVYCDSLRLKFNDSTVFDNKKCKVDL 213
           SRDRLVEVYCDSLRLKFNDSTVFDNKKCKVDL
Sbjct: 181 SRDRLVEVYCDSLRLKFNDSTVFDNKKCKVDL 212

[Close]

BLAST of Csa1G134270 vs. TrEMBL
Match: A0A0A0LY09_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132760 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.3e-58
Identity = 113/184 (61.41%), Postives = 145/184 (78.80%), Query Frame = 1


Query: 28  HGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSLTDRKLN 87
           HG  KRTR++R+ GR+LLG++ LVA+ MIICWL+V P++P +IVETG+VI HS T   LN
Sbjct: 10  HGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIAHSSTISMLN 69

Query: 88  ATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKNKTVLTSTIQGNFI 147
           ATIAFTV SYNPNK+ASI MD MRMIV +MG+ F S IPSFT  P+N+TVL+S +Q NF 
Sbjct: 70  ATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLSSAVQVNFE 129

Query: 148 YPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFNDSTVFDNKK 207
           YPFG+ +E      I+PEL+FSA+VSY +++W S+ RL+E+YC+ + LK NDST FDN K
Sbjct: 130 YPFGYTEE------INPELQFSAEVSYSIKKWMSKPRLLEIYCNHILLKINDSTAFDNTK 187

Query: 208 CKVD 212
           CKVD
Sbjct: 190 CKVD 187

[Close]

BLAST of Csa1G134270 vs. TrEMBL
Match: A0A0A0LVK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132770 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 5.0e-54
Identity = 106/196 (54.08%), Postives = 144/196 (73.47%), Query Frame = 1


Query: 17  SSSKEMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQV 76
           +SS + S   ++ T K+TR++RI GR+LL ++ LV +AM+ICWL+VFP+NP I VETG+V
Sbjct: 11  ASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRV 70

Query: 77  IPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKNKT 136
           I H+ T   LNATI FTV  YNPNK+AS+ + SMRMIV+ MG +F S IP+F Q P N+T
Sbjct: 71  IAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIPTFMQTPGNQT 130

Query: 137 VLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLK 196
           VL+  ++ NF YPFGH +E      I+PEL FSA++SY +E WTSR RL+ +YC++L L+
Sbjct: 131 VLSPAVEVNFDYPFGHQEE------INPELHFSAEISYSVEHWTSRPRLLLIYCNNLLLR 190

Query: 197 FNDSTVFDNKKCKVDL 213
            ND+  F+N KC VDL
Sbjct: 191 INDTRTFENTKCNVDL 200

[Close]

BLAST of Csa1G134270 vs. TrEMBL
Match: A0A0A0LSU5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132730 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.8e-51
Identity = 112/214 (52.34%), Postives = 148/214 (69.16%), Query Frame = 1


Query: 1   MRSNGKAGEPPPPPSSSSSKEMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWL 60
           MRS    GE        + K  S+  +  T KRTR++RI GR+LL ++I +++A+I CWL
Sbjct: 1   MRSTTTQGEGASSSIIEAPKR-SFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWL 60

Query: 61  IVFPRNPDIIVETGQVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSD-MGL 120
           +VFPR P ++VET +V  H  T+R LNATI F + SYNPNKKASI MDS++MIVSD MGL
Sbjct: 61  VVFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGL 120

Query: 121 SFWSDIPSFTQPPKNKTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERW 180
            F S IP+FT  P+N+ V  ST++ NF+YPFG     +  + +  ELRFSA+VSYI+ RW
Sbjct: 121 PFHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRP---VHSDWVHLELRFSAQVSYIVNRW 180

Query: 181 TSRDRLVEVYCDSLRLKFNDSTV-FDNKKCKVDL 213
            S+ RL+E+YCD L L+ NDST  FD  KC+VDL
Sbjct: 181 RSKPRLLEIYCDHLWLRINDSTPNFDKTKCRVDL 210

[Close]

BLAST of Csa1G134270 vs. TrEMBL
Match: A0A0A0LV68_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132740 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.3e-46
Identity = 103/188 (54.79%), Postives = 131/188 (69.68%), Query Frame = 1


Query: 27  KHGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSLTDRKL 86
           +HG AKRTRV+RI GR+LL  ++L+ IA++ CW +V PR P ++VE+GQV  +  T RKL
Sbjct: 31  QHGIAKRTRVIRIIGRSLLCAIMLLGIAILTCWFVVIPRTPQLMVESGQVTGYHSTIRKL 90

Query: 87  NATIAFTVTSYNPNKKASIRMDSMRMIVSD-MGLSFWSDIPSFTQPPKNKTVLTSTIQGN 146
           NATI F + SYNPNK+ASI +DSM+M V + M + F SDIP+FT  P+N TVLT TI  N
Sbjct: 91  NATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPFHSDIPNFTMTPRNMTVLTPTILVN 150

Query: 147 FIYPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFNDSTV-FD 206
            IYPFG     +    I  EL FSAKVSYI  RW S+ RL+E+YC+    K +DS   FD
Sbjct: 151 CIYPFGRP---LHAGWIHIELSFSAKVSYIFNRWASKPRLMEIYCNHFWFKIDDSMPNFD 210

Query: 207 NKKCKVDL 213
           N KC+VDL
Sbjct: 211 NIKCQVDL 215

[Close]

BLAST of Csa1G134270 vs. TAIR10
Match: AT2G35980.1 (AT2G35980.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 64.7 bits (156), Expect = 7.9e-11
Identity = 57/199 (28.64%), Postives = 87/199 (43.72%), Query Frame = 1


Query: 10  PPPPPSSSSSKEMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDI 69
           PPP P         Y   HG      +L +  + ++ L++++ +A +I WLIV PR    
Sbjct: 17  PPPAPKGY------YRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKF 76

Query: 70  IVETGQV--IPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWS-DIP 129
            V    +    H+  D  L   +A TV   NPNK+  +  D +       G  F +  + 
Sbjct: 77  HVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLT 136

Query: 130 SFTQPPKNKTVLTSTIQGN--FIYPFGHMKEL--MKLEGI-SPELRFSAKVSYIMERWTS 189
            F Q  KN TVLT T QG    I+  G  + L   ++ G+ + E++F  +V + +     
Sbjct: 137 PFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKF 196

Query: 190 RDRLVEVYCDSLRLKFNDS 201
           R    +V CD LRL  + S
Sbjct: 197 RRIKPKVDCDDLRLPLSTS 209

[Close]

BLAST of Csa1G134270 vs. TAIR10
Match: AT1G08160.1 (AT1G08160.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 62.4 bits (150), Expect = 3.9e-10
Identity = 55/183 (30.05%), Postives = 87/183 (47.54%), Query Frame = 1


Query: 39  ITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSL--TDRKLNATIAFTVTS 98
           I    LLGL  LV +A++I +L + P+     VE   V   ++   D  +NA  ++ + S
Sbjct: 41  IVALVLLGL--LVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKS 100

Query: 99  YNPNKKASIRMDSMRMIVSDMGLSF-WSDIPSFTQPPKNKT-VLTSTIQGNFIYPFGHMK 158
           YNP K  S+R  SMR+  +    S    +I  F Q PKN+T + T  +  N      + +
Sbjct: 101 YNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNAR 160

Query: 159 ELM--KLEG-ISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFNDSTV--FDNKKCK 213
           +L   K +G I  E+  +A+VSY    + SR R ++  C  + +    S++  F    CK
Sbjct: 161 DLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCK 220

[Close]

BLAST of Csa1G134270 vs. TAIR10
Match: AT4G09590.1 (AT4G09590.1 NDR1/HIN1-like 22)

HSP 1 Score: 47.8 bits (112), Expect = 1.0e-05
Identity = 30/111 (27.03%), Postives = 53/111 (47.75%), Query Frame = 1


Query: 38  RITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSLTD-RKLNATIAFTVTS 97
           RI G  ++G +I+V + + + W+I+ P+NP+ I++   V   +L+    L +    T+ S
Sbjct: 21  RICG-AIIGFIIIVLMTIFLVWIILQPKNPEFILQDTTVYAFNLSQPNLLTSKFQITIAS 80

Query: 98  YNPNKKASIRMDSMRMIVS--DMGLSFWSDIPSFTQPPKNKTVLTSTIQGN 146
            N N    I  D +    S  +  ++  SD+P   Q  K  +V +  + GN
Sbjct: 81  RNRNSNIGIYYDHLHAYASYRNQQITLASDLPPTYQRHKEDSVWSPLLYGN 130

[Close]

BLAST of Csa1G134270 vs. NCBI nr
Match: gi|449443378|ref|XP_004139454.1| (PREDICTED: uncharacterized protein LOC101218532 [Cucumis sativus])

HSP 1 Score: 426.8 bits (1096), Expect = 2.2e-116
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 1


Query: 1   MRSNGKAGEPPPPPSSSSSKEMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWL 60
           MRSNGKAGEPPPPPSSSSSKEMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWL
Sbjct: 1   MRSNGKAGEPPPPPSSSSSKEMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWL 60

Query: 61  IVFPRNPDIIVETGQVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLS 120
           IVFPRNPDIIVETGQVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLS
Sbjct: 61  IVFPRNPDIIVETGQVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLS 120

Query: 121 FWSDIPSFTQPPKNKTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWT 180
           FWSDIPSFTQPPKNKTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWT
Sbjct: 121 FWSDIPSFTQPPKNKTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWT 180

Query: 181 SRDRLVEVYCDSLRLKFNDSTVFDNKKCKVDL 213
           SRDRLVEVYCDSLRLKFNDSTVFDNKKCKVDL
Sbjct: 181 SRDRLVEVYCDSLRLKFNDSTVFDNKKCKVDL 212

[Close]

BLAST of Csa1G134270 vs. NCBI nr
Match: gi|659071871|ref|XP_008462326.1| (PREDICTED: uncharacterized protein At1g08160-like [Cucumis melo])

HSP 1 Score: 380.9 bits (977), Expect = 1.4e-102
Identity = 192/212 (90.57%), Postives = 200/212 (94.34%), Query Frame = 1


Query: 1   MRSNGKAGEPPPPPSSSSSKEMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWL 60
           MRS    GEP    SSSS+KE+SYV KHG AKRTRVLRITGRTLLGLMILVAIAMIICWL
Sbjct: 1   MRSIATQGEP----SSSSAKEISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWL 60

Query: 61  IVFPRNPDIIVETGQVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLS 120
           IVFPRNPD+IVETG+VIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIV+DMGLS
Sbjct: 61  IVFPRNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLS 120

Query: 121 FWSDIPSFTQPPKNKTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWT 180
           FWSDIPSFTQPPKNKTVL STIQGNFIYPFGHMKEL+KLEGISP+LRFSAKVSYIMERWT
Sbjct: 121 FWSDIPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWT 180

Query: 181 SRDRLVEVYCDSLRLKFNDSTVFDNKKCKVDL 213
           SR RL+EVYCDSLRLKFNDSTVFDNKKCKVDL
Sbjct: 181 SRGRLLEVYCDSLRLKFNDSTVFDNKKCKVDL 208

[Close]

BLAST of Csa1G134270 vs. NCBI nr
Match: gi|659071875|ref|XP_008462348.1| (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 234.6 bits (597), Expect = 1.6e-58
Identity = 115/185 (62.16%), Postives = 144/185 (77.84%), Query Frame = 1


Query: 28  HGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSLTDRKLN 87
           HG  KRTR++R+ GR+LLG++ LVA+ MIICWL+V P+ P +IVETG+V+ HS T   LN
Sbjct: 10  HGITKRTRLIRLVGRSLLGVIFLVALGMIICWLVVIPKTPRLIVETGKVVVHSSTISMLN 69

Query: 88  ATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKNKTVLTSTIQGNFI 147
           ATIAFTV SYNPNK+ASI MD MRMIV +MG+ F S IPSFT  P+N+TVL S +Q NF 
Sbjct: 70  ATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLWSAVQVNFE 129

Query: 148 YPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFNDSTVFDNKK 207
           YPFG+ +E      I+PEL+FSA+VSY +E+W S+ RL+E+YC+ L LK NDST FDN K
Sbjct: 130 YPFGYTEE------INPELQFSAEVSYSVEKWMSKPRLLEIYCNHLLLKINDSTTFDNTK 188

Query: 208 CKVDL 213
           CKVDL
Sbjct: 190 CKVDL 188

[Close]

BLAST of Csa1G134270 vs. NCBI nr
Match: gi|778659286|ref|XP_011654134.1| (PREDICTED: protein YLS9-like isoform X2 [Cucumis sativus])

HSP 1 Score: 233.0 bits (593), Expect = 4.8e-58
Identity = 113/184 (61.41%), Postives = 145/184 (78.80%), Query Frame = 1


Query: 28  HGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSLTDRKLN 87
           HG  KRTR++R+ GR+LLG++ LVA+ MIICWL+V P++P +IVETG+VI HS T   LN
Sbjct: 10  HGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIAHSSTISMLN 69

Query: 88  ATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKNKTVLTSTIQGNFI 147
           ATIAFTV SYNPNK+ASI MD MRMIV +MG+ F S IPSFT  P+N+TVL+S +Q NF 
Sbjct: 70  ATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLSSAVQVNFE 129

Query: 148 YPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFNDSTVFDNKK 207
           YPFG+ +E      I+PEL+FSA+VSY +++W S+ RL+E+YC+ + LK NDST FDN K
Sbjct: 130 YPFGYTEE------INPELQFSAEVSYSIKKWMSKPRLLEIYCNHILLKINDSTAFDNTK 187

Query: 208 CKVD 212
           CKVD
Sbjct: 190 CKVD 187

[Close]

BLAST of Csa1G134270 vs. NCBI nr
Match: gi|778664980|ref|XP_011648454.1| (PREDICTED: uncharacterized protein LOC105434469 [Cucumis sativus])

HSP 1 Score: 219.2 bits (557), Expect = 7.1e-54
Identity = 106/196 (54.08%), Postives = 144/196 (73.47%), Query Frame = 1


Query: 17  SSSKEMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQV 76
           +SS + S   ++ T K+TR++RI GR+LL ++ LV +AM+ICWL+VFP+NP I VETG+V
Sbjct: 11  ASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRV 70

Query: 77  IPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKNKT 136
           I H+ T   LNATI FTV  YNPNK+AS+ + SMRMIV+ MG +F S IP+F Q P N+T
Sbjct: 71  IAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIPTFMQTPGNQT 130

Query: 137 VLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLK 196
           VL+  ++ NF YPFGH +E      I+PEL FSA++SY +E WTSR RL+ +YC++L L+
Sbjct: 131 VLSPAVEVNFDYPFGHQEE------INPELHFSAEISYSVEHWTSRPRLLLIYCNNLLLR 190

Query: 197 FNDSTVFDNKKCKVDL 213
            ND+  F+N KC VDL
Sbjct: 191 INDTRTFENTKCNVDL 200

The following BLAST results are available for this feature:

BLAST of Csa1G134270 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YLS9_ARATH	1.4e-09	28.64	Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1	[more]
Y1816_ARATH	7.0e-09	30.05	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana GN=At1g08160 PE=2 SV=1	[more]

BLAST of Csa1G134270 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSV0_CUCSA	1.6e-116	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G134270 PE=4 SV=1	[more]
A0A0A0LY09_CUCSA	3.3e-58	61.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132760 PE=4 SV=1	[more]
A0A0A0LVK9_CUCSA	5.0e-54	54.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132770 PE=4 SV=1	[more]
A0A0A0LSU5_CUCSA	1.8e-51	52.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132730 PE=4 SV=1	[more]
A0A0A0LV68_CUCSA	1.3e-46	54.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132740 PE=4 SV=1	[more]

BLAST of Csa1G134270 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G35980.1	7.9e-11	28.64	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT1G08160.1	3.9e-10	30.05	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT4G09590.1	1.0e-05	27.03	NDR1/HIN1-like 22	[more]

BLAST of Csa1G134270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443378\|ref\|XP_004139454.1\|	2.2e-116	100.00	PREDICTED: uncharacterized protein LOC101218532 [Cucumis sativus]	[more]
gi\|659071871\|ref\|XP_008462326.1\|	1.4e-102	90.57	PREDICTED: uncharacterized protein At1g08160-like [Cucumis melo]	[more]
gi\|659071875\|ref\|XP_008462348.1\|	1.6e-58	62.16	PREDICTED: protein YLS9-like [Cucumis melo]	[more]
gi\|778659286\|ref\|XP_011654134.1\|	4.8e-58	61.41	PREDICTED: protein YLS9-like isoform X2 [Cucumis sativus]	[more]
gi\|778664980\|ref\|XP_011648454.1\|	7.1e-54	54.08	PREDICTED: uncharacterized protein LOC105434469 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU173432	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G134270.1	Csa1G134270.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU173432	CU173432	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31415	FAMILY NOT NAMED	coord: 1..212 score: 7.8

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G134270	Cucumber (Gy14) v1	cgycuB305
Csa1G134270	Cucurbita maxima (Rimu)	cmacuB163
Csa1G134270	Cucurbita maxima (Rimu)	cmacuB203
Csa1G134270	Cucurbita maxima (Rimu)	cmacuB579
Csa1G134270	Cucurbita moschata (Rifu)	cmocuB148
Csa1G134270	Cucurbita moschata (Rifu)	cmocuB188
Csa1G134270	Melon (DHL92) v3.5.1	cumeB015
Csa1G134270	Watermelon (Charleston Gray)	cuwcgB014
Csa1G134270	Watermelon (Charleston Gray)	cuwcgB028
Csa1G134270	Watermelon (97103) v1	cuwmB047
Csa1G134270	Watermelon (97103) v1	cuwmB065
Csa1G134270	Cucurbita pepo (Zucchini)	cpecuB516
Csa1G134270	Cucurbita pepo (Zucchini)	cpecuB805
Csa1G134270	Bottle gourd (USVL1VR-Ls)	culsiB005
Csa1G134270	Bottle gourd (USVL1VR-Ls)	culsiB044
Csa1G134270	Cucumber (Gy14) v2	cgybcuB001
Csa1G134270	Melon (DHL92) v3.6.1	cumedB010
Csa1G134270	Silver-seed gourd	carcuB0185
Csa1G134270	Watermelon (97103) v2	cuwmbB002
Csa1G134270	Watermelon (97103) v2	cuwmbB026
Csa1G134270	Wax gourd	cuwgoB049