Csa1G132680 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G132680
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionHistone H2B; contains IPR000558 (Histone H2B), IPR009072 (Histone-fold)
LocationChr1 : 9451991 .. 9452806 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCAGAACTCACTTTTGCTCGCATCTAATCTTCGATAAAACCTCAAACTCCTTCGTTATATTTAGCAATGGCGCCAAAGGCCGAGAAGAAGCCCGCCGAGAAAAAGCCAGCGGCGGAGGAGAAGAAGGCCGAGAAAACTCCGGCCGAGAAGAAGCCAAGAGCCGAGAAGAAGCTTCCCAAAGACGCCTCCGATAAGAAGAAGAAGAGAGCCAAGAAGAGCATTGAGACTTACAAGATCTACATCTTCAAAGTCCTCAAGCAAGTACATCCCGACATCGGAATCTCTAGCAAAGCCATGGGGATTATGAACAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAGAAGCCGACTATCACCTCTCGGGAGATCCAAACGGCGGTGCGCCTTGTTCTTCCTGGTGAGCTGGCTAAACACGCCGTCTCTGAGGGTACCAAGGCTGTTACCAAGTTCACTAGCTCTTAGATTCATAGATTTTAGGGTTTTCTCGTGTAAAAAAGCAGGATCACTGTTCTGGATCGTTGATTTCTTTTGCTCTTGTTGCATATTCTGGAATTGAATGAATGAAAATCGGTTTACATGATTCTAATTCTTTTGTTAATTGCTTGGTCATGTCCTCATCGTTCAGATTGTTTGCTGGGCGGTCTCTGAAGATTTACCATAATTTCACCTTAACAAATTTGTATGCCTGAGACTGAGTCTGACTTCAACTAGTATTTTGAGTTTGTTGCTTTTCAATTGTCCAGGCAGAAGATATTGATTCAATGCCGTTGAATATGCTTCAA

mRNA sequence

ATGGCGCCAAAGGCCGAGAAGAAGCCCGCCGAGAAAAAGCCAGCGGCGGAGGAGAAGAAGGCCGAGAAAACTCCGGCCGAGAAGAAGCCAAGAGCCGAGAAGAAGCTTCCCAAAGACGCCTCCGATAAGAAGAAGAAGAGAGCCAAGAAGAGCATTGAGACTTACAAGATCTACATCTTCAAAGTCCTCAAGCAAGTACATCCCGACATCGGAATCTCTAGCAAAGCCATGGGGATTATGAACAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAGAAGCCGACTATCACCTCTCGGGAGATCCAAACGGCGGTGCGCCTTGTTCTTCCTGGTGAGCTGGCTAAACACGCCGTCTCTGAGGGTACCAAGGCTGTTACCAAGTTCACTAGCTCTTAG

Coding sequence (CDS)

ATGGCGCCAAAGGCCGAGAAGAAGCCCGCCGAGAAAAAGCCAGCGGCGGAGGAGAAGAAGGCCGAGAAAACTCCGGCCGAGAAGAAGCCAAGAGCCGAGAAGAAGCTTCCCAAAGACGCCTCCGATAAGAAGAAGAAGAGAGCCAAGAAGAGCATTGAGACTTACAAGATCTACATCTTCAAAGTCCTCAAGCAAGTACATCCCGACATCGGAATCTCTAGCAAAGCCATGGGGATTATGAACAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAGAAGCCGACTATCACCTCTCGGGAGATCCAAACGGCGGTGCGCCTTGTTCTTCCTGGTGAGCTGGCTAAACACGCCGTCTCTGAGGGTACCAAGGCTGTTACCAAGTTCACTAGCTCTTAG

Protein sequence

MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS*
Homology
[Close]
BLAST of Csa1G132680 vs. Swiss-Prot
Match: H2B7_ARATH (Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030 PE=1 SV=3)

HSP 1 Score: 248.1 bits (632), Expect = 6.0e-65
Identity = 129/145 (88.97%), Postives = 131/145 (90.34%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDAS---DKKKKRAKKSIETYKI 60
           MAPKAEKKPAEKKP  E+ KAEK PAEKKP+A KKLPK+A    DKKKK  KKS+ETYKI
Sbjct: 1   MAPKAEKKPAEKKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSVETYKI 60

Query: 61  YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVR 120
           YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREIQTAVR
Sbjct: 61  YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVR 120

Query: 121 LVLPGELAKHAVSEGTKAVTKFTSS 143
           LVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 LVLPGELAKHAVSEGTKAVTKFTSS 145

[Close]
BLAST of Csa1G132680 vs. Swiss-Prot
Match: H2B_GOSHI (Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV=3)

HSP 1 Score: 246.5 bits (628), Expect = 1.7e-64
Identity = 130/147 (88.44%), Postives = 134/147 (91.16%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKK-AEKTPAEKKPRAEKKLPKD----ASDKKKKRAKKSIETY 60
           MAPKAEKKPAEKKPA E+K  AEK PAEKKP+A KKLPK+    A DKKKKR KKS+ETY
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRVKKSVETY 60

Query: 61  KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTA 120
           KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTA
Sbjct: 61  KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTA 120

Query: 121 VRLVLPGELAKHAVSEGTKAVTKFTSS 143
           VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 VRLVLPGELAKHAVSEGTKAVTKFTSS 147

[Close]
BLAST of Csa1G132680 vs. Swiss-Prot
Match: H2B1_MEDTR (Probable histone H2B.1 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 245.0 bits (624), Expect = 5.1e-64
Identity = 129/148 (87.16%), Postives = 134/148 (90.54%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKK--AEKTPAEKKPRAEKKLPKD----ASDKKKKRAKKSIET 60
           MAPK EKKPAEKKPA E+K   AEK PAEKKP+A KKLPK+    A +KKKKR+KKS+ET
Sbjct: 1   MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 143
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]
BLAST of Csa1G132680 vs. Swiss-Prot
Match: H2B1_ARATH (Histone H2B.1 OS=Arabidopsis thaliana GN=At1g07790 PE=1 SV=3)

HSP 1 Score: 245.0 bits (624), Expect = 5.1e-64
Identity = 130/148 (87.84%), Postives = 134/148 (90.54%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEE-----KKAEKTPAEKKPRAEKKLP-KDASDKKKKRAKKSIET 60
           MAP+AEKKPAEKK AAE      K AEK PAEKKP+A KKLP K+A DKKKKR+KK++ET
Sbjct: 1   MAPRAEKKPAEKKTAAERPVEENKAAEKAPAEKKPKAGKKLPPKEAGDKKKKRSKKNVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 143
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]
BLAST of Csa1G132680 vs. Swiss-Prot
Match: H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 245.0 bits (624), Expect = 5.1e-64
Identity = 130/150 (86.67%), Postives = 134/150 (89.33%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEE-----KKAEKTPAEKKPRAEKKLPKDAS---DKKKKRAKKSI 60
           MAPKAEKKPAEKKPA+E+      KAEK PAEKKP+A KKLPK+A    DKKKK  KKS+
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSV 60

Query: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 120
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREI
Sbjct: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREI 120

Query: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 143
           QTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]
BLAST of Csa1G132680 vs. TrEMBL
Match: A0A0A0LST8_CUCSA (Histone H2B OS=Cucumis sativus GN=Csa_1G132680 PE=3 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 3.0e-71
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60
           MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 143
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]
BLAST of Csa1G132680 vs. TrEMBL
Match: A0A0A0LV55_CUCSA (Histone H2B OS=Cucumis sativus GN=Csa_1G132130 PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-70
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60
           MAPKAEKKPAEKKPAAEEKKAEK PAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 143
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]
BLAST of Csa1G132680 vs. TrEMBL
Match: A0A0D2SV51_GOSRA (Histone H2B OS=Gossypium raimondii GN=B456_006G104400 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 3.4e-67
Identity = 136/142 (95.77%), Postives = 139/142 (97.89%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60
           MAPKAEKKPAEKKPA EEKKAEK PAEKKPRAEKKLPK+A DKKKKR+KKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPA-EEKKAEKAPAEKKPRAEKKLPKEAGDKKKKRSKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 143
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 141

[Close]
BLAST of Csa1G132680 vs. TrEMBL
Match: A0A0D2S0C9_GOSRA (Histone H2B OS=Gossypium raimondii GN=B456_006G104500 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 7.6e-67
Identity = 135/142 (95.07%), Postives = 139/142 (97.89%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60
           MAPKAEKKPAEKKPA EEKKAEK PAEKKPRAEKKLPK+A DK+KKR+KKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPA-EEKKAEKAPAEKKPRAEKKLPKEAGDKRKKRSKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 143
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 141

[Close]
BLAST of Csa1G132680 vs. TrEMBL
Match: A0A0D2NPV9_GOSRA (Histone H2B OS=Gossypium raimondii GN=B456_006G104600 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 7.6e-67
Identity = 135/142 (95.07%), Postives = 139/142 (97.89%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60
           MAPKAEKKPAEKKPA EEKKA+K PAEKKPRAEKKLPK+A DKKKKR+KKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPA-EEKKADKAPAEKKPRAEKKLPKEAGDKKKKRSKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 143
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 141

[Close]
BLAST of Csa1G132680 vs. TAIR10
Match: AT3G46030.1 (AT3G46030.1 Histone superfamily protein)

HSP 1 Score: 248.1 bits (632), Expect = 3.4e-66
Identity = 129/145 (88.97%), Postives = 131/145 (90.34%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDAS---DKKKKRAKKSIETYKI 60
           MAPKAEKKPAEKKP  E+ KAEK PAEKKP+A KKLPK+A    DKKKK  KKS+ETYKI
Sbjct: 1   MAPKAEKKPAEKKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSVETYKI 60

Query: 61  YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVR 120
           YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREIQTAVR
Sbjct: 61  YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVR 120

Query: 121 LVLPGELAKHAVSEGTKAVTKFTSS 143
           LVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 LVLPGELAKHAVSEGTKAVTKFTSS 145

[Close]
BLAST of Csa1G132680 vs. TAIR10
Match: AT1G07790.1 (AT1G07790.1 Histone superfamily protein)

HSP 1 Score: 245.0 bits (624), Expect = 2.9e-65
Identity = 130/148 (87.84%), Postives = 134/148 (90.54%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEE-----KKAEKTPAEKKPRAEKKLP-KDASDKKKKRAKKSIET 60
           MAP+AEKKPAEKK AAE      K AEK PAEKKP+A KKLP K+A DKKKKR+KK++ET
Sbjct: 1   MAPRAEKKPAEKKTAAERPVEENKAAEKAPAEKKPKAGKKLPPKEAGDKKKKRSKKNVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 143
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]
BLAST of Csa1G132680 vs. TAIR10
Match: AT5G59910.1 (AT5G59910.1 Histone superfamily protein)

HSP 1 Score: 245.0 bits (624), Expect = 2.9e-65
Identity = 130/150 (86.67%), Postives = 134/150 (89.33%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEE-----KKAEKTPAEKKPRAEKKLPKDAS---DKKKKRAKKSI 60
           MAPKAEKKPAEKKPA+E+      KAEK PAEKKP+A KKLPK+A    DKKKK  KKS+
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSV 60

Query: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 120
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREI
Sbjct: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREI 120

Query: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 143
           QTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]
BLAST of Csa1G132680 vs. TAIR10
Match: AT3G45980.1 (AT3G45980.1 Histone superfamily protein)

HSP 1 Score: 244.2 bits (622), Expect = 4.9e-65
Identity = 130/150 (86.67%), Postives = 133/150 (88.67%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEE-----KKAEKTPAEKKPRAEKKLPKDAS---DKKKKRAKKSI 60
           MAP+AEKKPAEKKPAAE+      KAEK PAEKKP+A KKLPK+A    DKKKK  KKS+
Sbjct: 1   MAPRAEKKPAEKKPAAEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSV 60

Query: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 120
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREI
Sbjct: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREI 120

Query: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 143
           QTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]
BLAST of Csa1G132680 vs. TAIR10
Match: AT2G28720.1 (AT2G28720.1 Histone superfamily protein)

HSP 1 Score: 241.1 bits (614), Expect = 4.1e-64
Identity = 130/151 (86.09%), Postives = 132/151 (87.42%), Query Frame = 1 

Query: 1   MAPKA-----EKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDAS----DKKKKRAKKS 60
           MAPKA     EKKPAEK PA EEK AEK PAEKKP+A KKLPK+A     +KKKKR KKS
Sbjct: 1   MAPKAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKKS 60

Query: 61  IETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSRE 120
            ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSRE
Sbjct: 61  TETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 143
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151

[Close]
BLAST of Csa1G132680 vs. NCBI nr
Match: gi|449443375|ref|XP_004139453.1| (PREDICTED: histone H2B.7-like [Cucumis sativus])

HSP 1 Score: 275.8 bits (704), Expect = 4.3e-71
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60
           MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 143
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]
BLAST of Csa1G132680 vs. NCBI nr
Match: gi|778659255|ref|XP_011654070.1| (PREDICTED: histone H2B.7 [Cucumis sativus])

HSP 1 Score: 273.9 bits (699), Expect = 1.6e-70
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60
           MAPKAEKKPAEKKPAAEEKKAEK PAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 143
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]
BLAST of Csa1G132680 vs. NCBI nr
Match: gi|823172029|ref|XP_012484994.1| (PREDICTED: histone H2B-like [Gossypium raimondii])

HSP 1 Score: 262.3 bits (669), Expect = 4.9e-67
Identity = 136/142 (95.77%), Postives = 139/142 (97.89%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60
           MAPKAEKKPAEKKPA EEKKAEK PAEKKPRAEKKLPK+A DKKKKR+KKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPA-EEKKAEKAPAEKKPRAEKKLPKEAGDKKKKRSKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 143
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 141

[Close]
BLAST of Csa1G132680 vs. NCBI nr
Match: gi|823172056|ref|XP_012485001.1| (PREDICTED: histone H2B-like [Gossypium raimondii])

HSP 1 Score: 261.2 bits (666), Expect = 1.1e-66
Identity = 135/142 (95.07%), Postives = 139/142 (97.89%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60
           MAPKAEKKPAEKKPA EEKKA+K PAEKKPRAEKKLPK+A DKKKKR+KKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPA-EEKKADKAPAEKKPRAEKKLPKEAGDKKKKRSKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 143
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 141

[Close]
BLAST of Csa1G132680 vs. NCBI nr
Match: gi|823172032|ref|XP_012484995.1| (PREDICTED: histone H2B-like [Gossypium raimondii])

HSP 1 Score: 261.2 bits (666), Expect = 1.1e-66
Identity = 135/142 (95.07%), Postives = 139/142 (97.89%), Query Frame = 1 

Query: 1   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60
           MAPKAEKKPAEKKPA EEKKAEK PAEKKPRAEKKLPK+A DK+KKR+KKSIETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPA-EEKKAEKAPAEKKPRAEKKLPKEAGDKRKKRSKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 143
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 141

The following BLAST results are available for this feature:
BLAST of Csa1G132680 vs. Swiss-Prot
Match NameE-valueIdentityDescription
H2B7_ARATH6.0e-6588.97Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030 PE=1 SV=3[more]
H2B_GOSHI1.7e-6488.44Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV=3[more]
H2B1_MEDTR5.1e-6487.16Probable histone H2B.1 OS=Medicago truncatula PE=3 SV=3[more]
H2B1_ARATH5.1e-6487.84Histone H2B.1 OS=Arabidopsis thaliana GN=At1g07790 PE=1 SV=3[more]
H2B11_ARATH5.1e-6486.67Histone H2B.11 OS=Arabidopsis thaliana GN=At5g59910 PE=1 SV=5[more]
BLAST of Csa1G132680 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LST8_CUCSA3.0e-71100.00Histone H2B OS=Cucumis sativus GN=Csa_1G132680 PE=3 SV=1[more]
A0A0A0LV55_CUCSA1.1e-7099.30Histone H2B OS=Cucumis sativus GN=Csa_1G132130 PE=3 SV=1[more]
A0A0D2SV51_GOSRA3.4e-6795.77Histone H2B OS=Gossypium raimondii GN=B456_006G104400 PE=3 SV=1[more]
A0A0D2S0C9_GOSRA7.6e-6795.07Histone H2B OS=Gossypium raimondii GN=B456_006G104500 PE=3 SV=1[more]
A0A0D2NPV9_GOSRA7.6e-6795.07Histone H2B OS=Gossypium raimondii GN=B456_006G104600 PE=3 SV=1[more]
BLAST of Csa1G132680 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G46030.13.4e-6688.97 Histone superfamily protein[more]
AT1G07790.12.9e-6587.84 Histone superfamily protein[more]
AT5G59910.12.9e-6586.67 Histone superfamily protein[more]
AT3G45980.14.9e-6586.67 Histone superfamily protein[more]
AT2G28720.14.1e-6486.09 Histone superfamily protein[more]
BLAST of Csa1G132680 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443375|ref|XP_004139453.1|4.3e-71100.00PREDICTED: histone H2B.7-like [Cucumis sativus][more]
gi|778659255|ref|XP_011654070.1|1.6e-7099.30PREDICTED: histone H2B.7 [Cucumis sativus][more]
gi|823172029|ref|XP_012484994.1|4.9e-6795.77PREDICTED: histone H2B-like [Gossypium raimondii][more]
gi|823172056|ref|XP_012485001.1|1.1e-6695.07PREDICTED: histone H2B-like [Gossypium raimondii][more]
gi|823172032|ref|XP_012484995.1|1.1e-6695.07PREDICTED: histone H2B-like [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000558Histone_H2B
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046982protein heterodimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU099466cucumber EST collection version 3.0transcribed_cluster
CU105628cucumber EST collection version 3.0transcribed_cluster
CU109025cucumber EST collection version 3.0transcribed_cluster
CU137540cucumber EST collection version 3.0transcribed_cluster
CU167386cucumber EST collection version 3.0transcribed_cluster
CU176668cucumber EST collection version 3.0transcribed_cluster
CU177683cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G132680.1Csa1G132680.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU177683CU177683transcribed_cluster
CU105628CU105628transcribed_cluster
CU137540CU137540transcribed_cluster
CU167386CU167386transcribed_cluster
CU176668CU176668transcribed_cluster
CU099466CU099466transcribed_cluster
CU109025CU109025transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000558Histone H2BPRINTSPR00621HISTONEH2Bcoord: 126..139
score: 5.3E-49coord: 74..94
score: 5.3E-49coord: 96..113
score: 5.3E-49coord: 113..126
score: 5.3E-49coord: 55..73
score: 5.3
IPR000558Histone H2BPANTHERPTHR23428HISTONE H2Bcoord: 1..142
score: 5.7E
IPR000558Histone H2BSMARTSM00427h2b3coord: 45..141
score: 1.1
IPR000558Histone H2BPROSITEPS00357HISTONE_H2Bcoord: 110..132
scor
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 5..118
score: 7.7
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 23..142
score: 3.2
IPR009072Histone-foldunknownSSF47113Histone-foldcoord: 27..142
score: 1.39

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G132680Wax gourdcuwgoB049
Csa1G132680Cucumber (Gy14) v1cgycuB305
Csa1G132680Cucurbita maxima (Rimu)cmacuB163
Csa1G132680Cucurbita maxima (Rimu)cmacuB203
Csa1G132680Cucurbita moschata (Rifu)cmocuB148
Csa1G132680Cucurbita moschata (Rifu)cmocuB188
Csa1G132680Melon (DHL92) v3.5.1cumeB015
Csa1G132680Watermelon (Charleston Gray)cuwcgB014
Csa1G132680Cucurbita pepo (Zucchini)cpecuB516
Csa1G132680Cucurbita pepo (Zucchini)cpecuB805
Csa1G132680Bottle gourd (USVL1VR-Ls)culsiB044
Csa1G132680Cucumber (Gy14) v2cgybcuB001
Csa1G132680Melon (DHL92) v3.6.1cumedB010
Csa1G132680Silver-seed gourdcarcuB0185
Csa1G132680Watermelon (97103) v2cuwmbB002