Csa1G124020 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCAGCCTCTTGAAACTCTTGATTGCCACGTCTTTTTTAGCTCACATGTTCTTCTTTACGGTTGAATCAAGCCCAAACCCTAAATCGAGTCTAGCAACACGAATAAAGTTAGAAGGTGAGACATCTGATTGTTGGGGGTCTCTATATGAACTTCAAGCATGTACCGGAGAAGTTATTACATTCTTTCTTAGTGGAGAAGCGTATTTAGGTGTCAAGTGTTGTCAAGCCATCAGAACCATTCAACATGAATGTTGGCCTACATTGCTTGGATCTCTAGGATACACAACTGAAGAAGGTGACATCCTTGAAGCCTATTGTGATACGACAGTTGATGTTGATCGTCTTTTCACAATCTCTTCTCCTAAACTAGCAATGGCACCATCTATCAAGCGAATGAATTATGAACCTAAAATCTCTCTCCCATGA ATGGCCAGCCTCTTGAAACTCTTGATTGCCACGTCTTTTTTAGCTCACATGTTCTTCTTTACGGTTGAATCAAGCCCAAACCCTAAATCGAGTCTAGCAACACGAATAAAGTTAGAAGGTGAGACATCTGATTGTTGGGGGTCTCTATATGAACTTCAAGCATGTACCGGAGAAGTTATTACATTCTTTCTTAGTGGAGAAGCGTATTTAGGTGTCAAGTGTTGTCAAGCCATCAGAACCATTCAACATGAATGTTGGCCTACATTGCTTGGATCTCTAGGATACACAACTGAAGAAGGTGACATCCTTGAAGCCTATTGTGATACGACAGTTGATGTTGATCGTCTTTTCACAATCTCTTCTCCTAAACTAGCAATGGCACCATCTATCAAGCGAATGAATTATGAACCTAAAATCTCTCTCCCATGA ATGGCCAGCCTCTTGAAACTCTTGATTGCCACGTCTTTTTTAGCTCACATGTTCTTCTTTACGGTTGAATCAAGCCCAAACCCTAAATCGAGTCTAGCAACACGAATAAAGTTAGAAGGTGAGACATCTGATTGTTGGGGGTCTCTATATGAACTTCAAGCATGTACCGGAGAAGTTATTACATTCTTTCTTAGTGGAGAAGCGTATTTAGGTGTCAAGTGTTGTCAAGCCATCAGAACCATTCAACATGAATGTTGGCCTACATTGCTTGGATCTCTAGGATACACAACTGAAGAAGGTGACATCCTTGAAGCCTATTGTGATACGACAGTTGATGTTGATCGTCTTTTCACAATCTCTTCTCCTAAACTAGCAATGGCACCATCTATCAAGCGAATGAATTATGAACCTAAAATCTCTCTCCCATGA MASLLKLLIATSFLAHMFFFTVESSPNPKSSLATRIKLEGETSDCWGSLYELQACTGEVITFFLSGEAYLGVKCCQAIRTIQHECWPTLLGSLGYTTEEGDILEAYCDTTVDVDRLFTISSPKLAMAPSIKRMNYEPKISLP*
BLAST of Csa1G124020 vs. Swiss-Prot
Match: EC11_ARATH (Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 3.0e-24 Identity = 48/108 (44.44%), Postives = 72/108 (66.67%), Query Frame = 1
BLAST of Csa1G124020 vs. Swiss-Prot
Match: EC12_ARATH (Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.1e-18 Identity = 43/110 (39.09%), Postives = 64/110 (58.18%), Query Frame = 1
BLAST of Csa1G124020 vs. Swiss-Prot
Match: EC14_ARATH (Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 2.1e-17 Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = 1
BLAST of Csa1G124020 vs. Swiss-Prot
Match: EC13_ARATH (Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 3.0e-16 Identity = 44/112 (39.29%), Postives = 60/112 (53.57%), Query Frame = 1
BLAST of Csa1G124020 vs. Swiss-Prot
Match: EC15_ARATH (Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 6.5e-11 Identity = 45/135 (33.33%), Postives = 65/135 (48.15%), Query Frame = 1
BLAST of Csa1G124020 vs. TrEMBL
Match: A0A0A0LSR4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G124020 PE=4 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 1.2e-75 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1
BLAST of Csa1G124020 vs. TrEMBL
Match: A0A0A0LVH9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G124010 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 1.8e-39 Identity = 79/119 (66.39%), Postives = 96/119 (80.67%), Query Frame = 1
BLAST of Csa1G124020 vs. TrEMBL
Match: A0A0A0K9I7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G056550 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 9.4e-33 Identity = 66/110 (60.00%), Postives = 83/110 (75.45%), Query Frame = 1
BLAST of Csa1G124020 vs. TrEMBL
Match: K7N3Y2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G168300 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 6.3e-29 Identity = 65/123 (52.85%), Postives = 88/123 (71.54%), Query Frame = 1
BLAST of Csa1G124020 vs. TrEMBL
Match: A0A0B2SQ80_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_031725 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 8.2e-29 Identity = 59/99 (59.60%), Postives = 79/99 (79.80%), Query Frame = 1
BLAST of Csa1G124020 vs. TAIR10
Match: AT1G76750.1 (AT1G76750.1 Protein of unknown function (DUF1278)) HSP 1 Score: 112.8 bits (281), Expect = 1.7e-25 Identity = 48/108 (44.44%), Postives = 72/108 (66.67%), Query Frame = 1
BLAST of Csa1G124020 vs. TAIR10
Match: AT2G21740.1 (AT2G21740.1 Protein of unknown function (DUF1278)) HSP 1 Score: 94.4 bits (233), Expect = 6.2e-20 Identity = 43/110 (39.09%), Postives = 64/110 (58.18%), Query Frame = 1
BLAST of Csa1G124020 vs. TAIR10
Match: AT4G39340.1 (AT4G39340.1 Protein of unknown function (DUF1278)) HSP 1 Score: 90.1 bits (222), Expect = 1.2e-18 Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = 1
BLAST of Csa1G124020 vs. TAIR10
Match: AT2G21750.1 (AT2G21750.1 Protein of unknown function (DUF1278)) HSP 1 Score: 86.3 bits (212), Expect = 1.7e-17 Identity = 44/112 (39.29%), Postives = 60/112 (53.57%), Query Frame = 1
BLAST of Csa1G124020 vs. TAIR10
Match: AT5G64720.1 (AT5G64720.1 Protein of unknown function (DUF1278)) HSP 1 Score: 68.6 bits (166), Expect = 3.7e-12 Identity = 45/135 (33.33%), Postives = 65/135 (48.15%), Query Frame = 1
BLAST of Csa1G124020 vs. NCBI nr
Match: gi|700209742|gb|KGN64838.1| (hypothetical protein Csa_1G124020 [Cucumis sativus]) HSP 1 Score: 290.4 bits (742), Expect = 1.7e-75 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1
BLAST of Csa1G124020 vs. NCBI nr
Match: gi|659072258|ref|XP_008464543.1| (PREDICTED: egg cell-secreted protein 1.2-like [Cucumis melo]) HSP 1 Score: 256.5 bits (654), Expect = 2.7e-65 Identity = 127/143 (88.81%), Postives = 133/143 (93.01%), Query Frame = 1
BLAST of Csa1G124020 vs. NCBI nr
Match: gi|700209741|gb|KGN64837.1| (hypothetical protein Csa_1G124010 [Cucumis sativus]) HSP 1 Score: 170.2 bits (430), Expect = 2.5e-39 Identity = 79/119 (66.39%), Postives = 96/119 (80.67%), Query Frame = 1
BLAST of Csa1G124020 vs. NCBI nr
Match: gi|659072260|ref|XP_008464551.1| (PREDICTED: egg cell-secreted protein 1.1-like [Cucumis melo]) HSP 1 Score: 157.9 bits (398), Expect = 1.3e-35 Identity = 73/99 (73.74%), Postives = 86/99 (86.87%), Query Frame = 1
BLAST of Csa1G124020 vs. NCBI nr
Match: gi|659081784|ref|XP_008441511.1| (PREDICTED: egg cell-secreted protein 1.2 [Cucumis melo]) HSP 1 Score: 150.2 bits (378), Expect = 2.7e-33 Identity = 73/142 (51.41%), Postives = 96/142 (67.61%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|