Csa1G119900 (gene) Cucumber (Chinese Long) v2

NameCsa1G119900
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 9068842 .. 9069125 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCAAGTTGTGTCAATCGAGGCAAGCTGGTGATCAAAAAAAGATTATTAGTGGAAAGGCCTCAAACTTCGTCTGCGCGTCTACGTCCTTCAATGTCGCAACTTTGCCCCGAACGCCTCAGACTACGACTTAGTTATAGAAGTATATTTTTATTGTCAGTTTAGACCTAGGCCTGATTGTAGCCATTTCTCTTCAGTTTCCTCTCCGTTATCTGATTGCTTTTTGTTGGTTTATGTTTTTGAACAATTCCTCATCATCCAACACGTGGATGAAAGGCTAA

mRNA sequence

ATGGAGTCAAGTTGTGTCAATCGAGGCAAGCTGGTGATCAAAAAAAGATTATTAGTGGAAAGGCCTCAAACTTCGTCTGCGCGTCTACGTCCTTCAATGTCGCAACTTTGCCCCGAACGCCTCAGACTACGACTTAGTTATAGAAACCTAGGCCTGATTGTAGCCATTTCTCTTCAGTTTCCTCTCCGTTATCTGATTGCTTTTTGTTGGTTTATGTTTTTGAACAATTCCTCATCATCCAACACGTGGATGAAAGGCTAA

Coding sequence (CDS)

ATGGAGTCAAGTTGTGTCAATCGAGGCAAGCTGGTGATCAAAAAAAGATTATTAGTGGAAAGGCCTCAAACTTCGTCTGCGCGTCTACGTCCTTCAATGTCGCAACTTTGCCCCGAACGCCTCAGACTACGACTTAGTTATAGAAACCTAGGCCTGATTGTAGCCATTTCTCTTCAGTTTCCTCTCCGTTATCTGATTGCTTTTTGTTGGTTTATGTTTTTGAACAATTCCTCATCATCCAACACGTGGATGAAAGGCTAA

Protein sequence

MESSCVNRGKLVIKKRLLVERPQTSSARLRPSMSQLCPERLRLRLSYRNLGLIVAISLQFPLRYLIAFCWFMFLNNSSSSNTWMKG*
BLAST of Csa1G119900 vs. TrEMBL
Match: A0A0A0LSP9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G119900 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 5.7e-41
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1

Query: 1  MESSCVNRGKLVIKKRLLVERPQTSSARLRPSMSQLCPERLRLRLSYRNLGLIVAISLQF 60
          MESSCVNRGKLVIKKRLLVERPQTSSARLRPSMSQLCPERLRLRLSYRNLGLIVAISLQF
Sbjct: 1  MESSCVNRGKLVIKKRLLVERPQTSSARLRPSMSQLCPERLRLRLSYRNLGLIVAISLQF 60

Query: 61 PLRYLIAFCWFMFLNNSSSSNTWMKG 87
          PLRYLIAFCWFMFLNNSSSSNTWMKG
Sbjct: 61 PLRYLIAFCWFMFLNNSSSSNTWMKG 86

BLAST of Csa1G119900 vs. NCBI nr
Match: gi|700209727|gb|KGN64823.1| (hypothetical protein Csa_1G119900 [Cucumis sativus])

HSP 1 Score: 174.5 bits (441), Expect = 8.2e-41
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1

Query: 1  MESSCVNRGKLVIKKRLLVERPQTSSARLRPSMSQLCPERLRLRLSYRNLGLIVAISLQF 60
          MESSCVNRGKLVIKKRLLVERPQTSSARLRPSMSQLCPERLRLRLSYRNLGLIVAISLQF
Sbjct: 1  MESSCVNRGKLVIKKRLLVERPQTSSARLRPSMSQLCPERLRLRLSYRNLGLIVAISLQF 60

Query: 61 PLRYLIAFCWFMFLNNSSSSNTWMKG 87
          PLRYLIAFCWFMFLNNSSSSNTWMKG
Sbjct: 61 PLRYLIAFCWFMFLNNSSSSNTWMKG 86

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LSP9_CUCSA5.7e-41100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G119900 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700209727|gb|KGN64823.1|8.2e-41100.00hypothetical protein Csa_1G119900 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G119900.1Csa1G119900.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None