Csa1G119890 (gene) Cucumber (Chinese Long) v2

NameCsa1G119890
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 9034154 .. 9034357 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGCTTCCGTCTGCCCTAACCCCCGTCGACGACTGACAGACGCTGTAAGCCTTTGCGATCGTGCTGTTCTCCGAGAGCTGCCGTTGGTCTGCGCTGTCGCTTCTAGAGCCGTTCTCCCATTATTTCTTAGAAATATAAGTGTCACATGTCGCCTTAAAAACAAGGAACACCACTTAATAAAACAATTGAACTTGAATTAG

mRNA sequence

ATGCAGGCTTCCGTCTGCCCTAACCCCCGTCGACGACTGACAGACGCTGTAAGCCTTTGCGATCGTGCTGTTCTCCGAGAGCTGCCGTTGGTCTGCGCTGTCGCTTCTAGAGCCGTTCTCCCATTATTTCTTAGAAATATAAGTGTCACATGTCGCCTTAAAAACAAGGAACACCACTTAATAAAACAATTGAACTTGAATTAG

Coding sequence (CDS)

ATGCAGGCTTCCGTCTGCCCTAACCCCCGTCGACGACTGACAGACGCTGTAAGCCTTTGCGATCGTGCTGTTCTCCGAGAGCTGCCGTTGGTCTGCGCTGTCGCTTCTAGAGCCGTTCTCCCATTATTTCTTAGAAATATAAGTGTCACATGTCGCCTTAAAAACAAGGAACACCACTTAATAAAACAATTGAACTTGAATTAG

Protein sequence

MQASVCPNPRRRLTDAVSLCDRAVLRELPLVCAVASRAVLPLFLRNISVTCRLKNKEHHLIKQLNLN*
BLAST of Csa1G119890 vs. TrEMBL
Match: A0A0A0LVG7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G119890 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.3e-29
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1

Query: 1  MQASVCPNPRRRLTDAVSLCDRAVLRELPLVCAVASRAVLPLFLRNISVTCRLKNKEHHL 60
          MQASVCPNPRRRLTDAVSLCDRAVLRELPLVCAVASRAVLPLFLRNISVTCRLKNKEHHL
Sbjct: 1  MQASVCPNPRRRLTDAVSLCDRAVLRELPLVCAVASRAVLPLFLRNISVTCRLKNKEHHL 60

Query: 61 IKQLNLN 68
          IKQLNLN
Sbjct: 61 IKQLNLN 67

BLAST of Csa1G119890 vs. NCBI nr
Match: gi|700209726|gb|KGN64822.1| (hypothetical protein Csa_1G119890 [Cucumis sativus])

HSP 1 Score: 136.3 bits (342), Expect = 1.9e-29
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1

Query: 1  MQASVCPNPRRRLTDAVSLCDRAVLRELPLVCAVASRAVLPLFLRNISVTCRLKNKEHHL 60
          MQASVCPNPRRRLTDAVSLCDRAVLRELPLVCAVASRAVLPLFLRNISVTCRLKNKEHHL
Sbjct: 1  MQASVCPNPRRRLTDAVSLCDRAVLRELPLVCAVASRAVLPLFLRNISVTCRLKNKEHHL 60

Query: 61 IKQLNLN 68
          IKQLNLN
Sbjct: 61 IKQLNLN 67

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LVG7_CUCSA1.3e-29100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G119890 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700209726|gb|KGN64822.1|1.9e-29100.00hypothetical protein Csa_1G119890 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G119890.1Csa1G119890.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None