Csa1G097750 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G097750
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 8663797 .. 8664298 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAAGTAGCTTTATACAGTCTCAAAAGAAGTTTGTGTAGAAGAAGAGAAATTGATCGATGGAGGCAAACAAAAGAAAACTTAGAGGCTTCATGAGAGGGAAATTGATGCCTTTCTACAAGCAATATAATGGAAGCAAAACAAAGCAAACTGGTTTGGTTGGCTATGTCTTCCATAGGGAGTGCTATAGTAGTGTTTCTCAACATAACATTGGTTTATTGGTGCAGGATGACCCCGGTCGGGACACGACGGCCACTCGTGACTCATTAAGTCAGTTTGATCGTTCATATGGAATCATAGCTGACGAAGGTGTCGATGTAAAGGCAGCAAATTATATTTCCTCCACGTTAGCAAGATTCAAAAGCTTGAATGAGTTACCTCATCCAATAGAATTGTCGTCGATTCCATTGCCCCACCAATAGATTTGATGACCTTGTCGAGCACTTCTCTATTATTTATCTTGGACTTTACTAGTTGATTATTATTCTAAGTAAAGAACCGATG

mRNA sequence

ATGGAGGCAAACAAAAGAAAACTTAGAGGCTTCATGAGAGGGAAATTGATGCCTTTCTACAAGCAATATAATGGAAGCAAAACAAAGCAAACTGGTTTGGTTGGCTATGTCTTCCATAGGGAGTGCTATAGTAGTGTTTCTCAACATAACATTGGTTTATTGGTGCAGGATGACCCCGGTCGGGACACGACGGCCACTCGTGACTCATTAAGTCAGTTTGATCGTTCATATGGAATCATAGCTGACGAAGGTGTCGATGTAAAGGCAGCAAATTATATTTCCTCCACGTTAGCAAGATTCAAAAGCTTGAATGAGTTACCTCATCCAATAGAATTGTCGTCGATTCCATTGCCCCACCAATAG

Coding sequence (CDS)

ATGGAGGCAAACAAAAGAAAACTTAGAGGCTTCATGAGAGGGAAATTGATGCCTTTCTACAAGCAATATAATGGAAGCAAAACAAAGCAAACTGGTTTGGTTGGCTATGTCTTCCATAGGGAGTGCTATAGTAGTGTTTCTCAACATAACATTGGTTTATTGGTGCAGGATGACCCCGGTCGGGACACGACGGCCACTCGTGACTCATTAAGTCAGTTTGATCGTTCATATGGAATCATAGCTGACGAAGGTGTCGATGTAAAGGCAGCAAATTATATTTCCTCCACGTTAGCAAGATTCAAAAGCTTGAATGAGTTACCTCATCCAATAGAATTGTCGTCGATTCCATTGCCCCACCAATAG

Protein sequence

MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSQHNIGLLVQDDPGRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPLPHQ*
Homology
[Close]
BLAST of Csa1G097750 vs. TrEMBL
Match: A0A0A0LVE7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G097750 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 3.7e-62
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1 

Query: 1   MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSQHNIGLLVQDDPG 60
           MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSQHNIGLLVQDDPG
Sbjct: 1   MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSQHNIGLLVQDDPG 60

Query: 61  RDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPLPHQ 120
           RDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPLPHQ
Sbjct: 61  RDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPLPHQ 120

[Close]
BLAST of Csa1G097750 vs. TrEMBL
Match: A0A067LN74_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10105 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.0e-11
Identity = 47/115 (40.87%), Postives = 62/115 (53.91%), Query Frame = 1 

Query: 1   MEANKRKLRGFMRGKLMPFYKQYNGSKTKQ-------------TGLVGYVFHRECYSSVS 60
           ME+N RK RGFM+GKL+PFY+    + T Q                VG+V H++   +  
Sbjct: 1   MESN-RKRRGFMKGKLIPFYRSSKATSTVQYSSKVKPSQSSPSAASVGFVVHQDYIITPP 60

Query: 61  QHNIGLLVQD-DPGRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFK 102
           +  +  +V   D  RD       LSQFD+ YG+  DEGVD+KAA YISS   RFK
Sbjct: 61  KQKVSFIVPTADSNRDKY-----LSQFDKLYGVAGDEGVDIKAATYISSVQERFK 109

[Close]
BLAST of Csa1G097750 vs. TrEMBL
Match: B9N0Y5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s09720g PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-07
Identity = 44/115 (38.26%), Postives = 59/115 (51.30%), Query Frame = 1 

Query: 1   MEANKRKLRGFMRGKLMPFYK---------QYNGS-KTKQTG----LVGYVFHRECYSSV 60
           ME+N RK RGFM+GKLM FY+         QY+   K  QT      V YV H++   + 
Sbjct: 1   MESN-RKRRGFMKGKLMRFYRSSSKSSSNVQYSSKVKPSQTSPTIASVAYVVHQDFTIAQ 60

Query: 61  SQHNIGLLVQDDPGRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFK 102
            +  +   V     R      D LSQFD+ +G++ D  +D KA +YISS   RFK
Sbjct: 61  QKQKVSFTVPASDNR-----HDKLSQFDKFFGVVGDVRIDNKATSYISSVQERFK 109

[Close]
BLAST of Csa1G097750 vs. TrEMBL
Match: A0A0D2Q4X1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G272900 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.4e-07
Identity = 44/119 (36.97%), Postives = 61/119 (51.26%), Query Frame = 1 

Query: 1   MEANKRKLRGFMRGKLMPFYKQY---------NGSKTKQ----TGLVGYVFHRECYSSVS 60
           M++N RK RGF++GKL P Y+           N +K  Q    T  VG+  HR+ Y    
Sbjct: 1   MDSN-RKGRGFIKGKLAPLYRAVKPTAAVQCTNKAKPNQGSSTTASVGFRVHRD-YMISQ 60

Query: 61  QHNIGLLVQDDPGRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNEL 107
              I  +V  D  R+      +L+Q D  +G++ DE VD+KAA YISS   RFK   +L
Sbjct: 61  PKKISFVVPADKNRE------NLNQIDNFFGVVGDESVDIKAATYISSVRERFKLEKQL 111

[Close]
BLAST of Csa1G097750 vs. TrEMBL
Match: A9PEI2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s33590g PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.4e-07
Identity = 48/116 (41.38%), Postives = 61/116 (52.59%), Query Frame = 1 

Query: 1   MEANKRKLRGFMRGKLMPFYK---------QYNGSKTKQ------TGLVGYVFHRECYSS 60
           ME+N RK +GF +GKLM FY+         QY+ SK K       T  VGYV H    + 
Sbjct: 1   MESN-RKRKGFTKGKLMLFYRSSPKPSSNVQYS-SKVKPSQTSPTTASVGYVNHDYMIAP 60

Query: 61  VSQHNIGLLVQDDPGRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFK 102
             Q  +  +V   P  D    RD LSQFD+ +G++ D  VD KA +YISS   RFK
Sbjct: 61  QKQ-KVSFIV---PAADNH--RDKLSQFDKFFGVVGDVSVDTKATSYISSVQERFK 108

[Close]
BLAST of Csa1G097750 vs. NCBI nr
Match: gi|700209701|gb|KGN64797.1| (hypothetical protein Csa_1G097750 [Cucumis sativus])

HSP 1 Score: 245.4 bits (625), Expect = 5.3e-62
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1 

Query: 1   MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSQHNIGLLVQDDPG 60
           MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSQHNIGLLVQDDPG
Sbjct: 1   MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSQHNIGLLVQDDPG 60

Query: 61  RDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPLPHQ 120
           RDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPLPHQ
Sbjct: 61  RDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPLPHQ 120

[Close]
BLAST of Csa1G097750 vs. NCBI nr
Match: gi|802539270|ref|XP_012070196.1| (PREDICTED: uncharacterized protein LOC105632422 [Jatropha curcas])

HSP 1 Score: 75.5 bits (184), Expect = 7.2e-11
Identity = 47/115 (40.87%), Postives = 62/115 (53.91%), Query Frame = 1 

Query: 1   MEANKRKLRGFMRGKLMPFYKQYNGSKTKQ-------------TGLVGYVFHRECYSSVS 60
           ME+N RK RGFM+GKL+PFY+    + T Q                VG+V H++   +  
Sbjct: 1   MESN-RKRRGFMKGKLIPFYRSSKATSTVQYSSKVKPSQSSPSAASVGFVVHQDYIITPP 60

Query: 61  QHNIGLLVQD-DPGRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFK 102
           +  +  +V   D  RD       LSQFD+ YG+  DEGVD+KAA YISS   RFK
Sbjct: 61  KQKVSFIVPTADSNRDKY-----LSQFDKLYGVAGDEGVDIKAATYISSVQERFK 109

[Close]
BLAST of Csa1G097750 vs. NCBI nr
Match: gi|566212463|ref|XP_006373214.1| (hypothetical protein POPTR_0017s09720g [Populus trichocarpa])

HSP 1 Score: 63.9 bits (154), Expect = 2.2e-07
Identity = 44/115 (38.26%), Postives = 59/115 (51.30%), Query Frame = 1 

Query: 1   MEANKRKLRGFMRGKLMPFYK---------QYNGS-KTKQTG----LVGYVFHRECYSSV 60
           ME+N RK RGFM+GKLM FY+         QY+   K  QT      V YV H++   + 
Sbjct: 1   MESN-RKRRGFMKGKLMRFYRSSSKSSSNVQYSSKVKPSQTSPTIASVAYVVHQDFTIAQ 60

Query: 61  SQHNIGLLVQDDPGRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFK 102
            +  +   V     R      D LSQFD+ +G++ D  +D KA +YISS   RFK
Sbjct: 61  QKQKVSFTVPASDNR-----HDKLSQFDKFFGVVGDVRIDNKATSYISSVQERFK 109

[Close]
BLAST of Csa1G097750 vs. NCBI nr
Match: gi|823127868|ref|XP_012440416.1| (PREDICTED: uncharacterized protein LOC105765726 [Gossypium raimondii])

HSP 1 Score: 62.8 bits (151), Expect = 4.8e-07
Identity = 44/119 (36.97%), Postives = 61/119 (51.26%), Query Frame = 1 

Query: 1   MEANKRKLRGFMRGKLMPFYKQY---------NGSKTKQ----TGLVGYVFHRECYSSVS 60
           M++N RK RGF++GKL P Y+           N +K  Q    T  VG+  HR+ Y    
Sbjct: 1   MDSN-RKGRGFIKGKLAPLYRAVKPTAAVQCTNKAKPNQGSSTTASVGFRVHRD-YMISQ 60

Query: 61  QHNIGLLVQDDPGRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNEL 107
              I  +V  D  R+      +L+Q D  +G++ DE VD+KAA YISS   RFK   +L
Sbjct: 61  PKKISFVVPADKNRE------NLNQIDNFFGVVGDESVDIKAATYISSVRERFKLEKQL 111

[Close]
BLAST of Csa1G097750 vs. NCBI nr
Match: gi|224060275|ref|XP_002300118.1| (hypothetical protein POPTR_0001s33590g [Populus trichocarpa])

HSP 1 Score: 62.4 bits (150), Expect = 6.3e-07
Identity = 48/116 (41.38%), Postives = 61/116 (52.59%), Query Frame = 1 

Query: 1   MEANKRKLRGFMRGKLMPFYK---------QYNGSKTKQ------TGLVGYVFHRECYSS 60
           ME+N RK +GF +GKLM FY+         QY+ SK K       T  VGYV H    + 
Sbjct: 1   MESN-RKRKGFTKGKLMLFYRSSPKPSSNVQYS-SKVKPSQTSPTTASVGYVNHDYMIAP 60

Query: 61  VSQHNIGLLVQDDPGRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFK 102
             Q  +  +V   P  D    RD LSQFD+ +G++ D  VD KA +YISS   RFK
Sbjct: 61  QKQ-KVSFIV---PAADNH--RDKLSQFDKFFGVVGDVSVDTKATSYISSVQERFK 108

The following BLAST results are available for this feature:
BLAST of Csa1G097750 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVE7_CUCSA3.7e-62100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G097750 PE=4 SV=1[more]
A0A067LN74_JATCU5.0e-1140.87Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10105 PE=4 SV=1[more]
B9N0Y5_POPTR1.5e-0738.26Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s09720g PE=4 SV=1[more]
A0A0D2Q4X1_GOSRA3.4e-0736.97Uncharacterized protein OS=Gossypium raimondii GN=B456_001G272900 PE=4 SV=1[more]
A9PEI2_POPTR4.4e-0741.38Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s33590g PE=2 SV=1[more]
BLAST of Csa1G097750 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209701|gb|KGN64797.1|5.3e-62100.00hypothetical protein Csa_1G097750 [Cucumis sativus][more]
gi|802539270|ref|XP_012070196.1|7.2e-1140.87PREDICTED: uncharacterized protein LOC105632422 [Jatropha curcas][more]
gi|566212463|ref|XP_006373214.1|2.2e-0738.26hypothetical protein POPTR_0017s09720g [Populus trichocarpa][more]
gi|823127868|ref|XP_012440416.1|4.8e-0736.97PREDICTED: uncharacterized protein LOC105765726 [Gossypium raimondii][more]
gi|224060275|ref|XP_002300118.1|6.3e-0741.38hypothetical protein POPTR_0001s33590g [Populus trichocarpa][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU128034cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G097750.1Csa1G097750.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU128034CU128034transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G097750Silver-seed gourdcarcuB0360
Csa1G097750Silver-seed gourdcarcuB0472
Csa1G097750Silver-seed gourdcarcuB1083
Csa1G097750Watermelon (97103) v2cuwmbB034
Csa1G097750Wax gourdcuwgoB016
Csa1G097750Wax gourdcuwgoB049
Csa1G097750Cucumber (Gy14) v1cgycuB314
Csa1G097750Cucurbita maxima (Rimu)cmacuB203
Csa1G097750Cucurbita maxima (Rimu)cmacuB431
Csa1G097750Cucurbita moschata (Rifu)cmocuB188
Csa1G097750Cucurbita moschata (Rifu)cmocuB421
Csa1G097750Melon (DHL92) v3.5.1cumeB015
Csa1G097750Watermelon (Charleston Gray)cuwcgB037
Csa1G097750Watermelon (97103) v1cuwmB010
Csa1G097750Cucurbita pepo (Zucchini)cpecuB516
Csa1G097750Cucurbita pepo (Zucchini)cpecuB528
Csa1G097750Bottle gourd (USVL1VR-Ls)culsiB044
Csa1G097750Cucumber (Gy14) v2cgybcuB001
Csa1G097750Melon (DHL92) v3.6.1cumedB010