Csa1G097740 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGCCATTGATTCCGTCTTCGATCCACTCCGGGAGTTCGCCAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAACCCGATCGCAAAGGTACGGTTTCCGAATCCCTTTTCATCTCTTTGTTTTCATAGATCTTGTAACCAATTTCCTCTGTTTTGCGTGATTTGTGTAGAGTTCACAAAGGTCGCGGTTCGTACAGCGATTGGCTTCGTCGTCATGGGATTCGTTGGTTTCTTCGTCAAGCTCATCTTTATCCCCATCAATAACATCATCGTCGGATCTGGCTAGGTCAGGAGTTTTGGCTTTTCACTTAAGTTTCTCTAGATTTCACTGTTTTGTGAATTGGGCTCTCGTTTGATTTATTGTTTCGCGAGGTTGGGCTACTTCTATTTTAGAAATCTTTATTCATCGTATCAAAAGTAATAATTAGGTTTGATCTATGCCCAATTTCAGTGTTTGGTATACTATTGATAATTTTTTTACATTGCTAGATGAATCTATATCTATGGCATGTAGGTTATGAAGGGAGAAATATTTCGGTTGTTAGAATAGTGTTTTAGCTATGATTCTATGAAGTATTAAGTTGGCCATTGATGACTTCATCGTGTCCCTTTCCTACATACTCCTTGACTTCCTTGTTTCTTAGAGGTTCTCCATGAAAATCATATTCTCCTTTCAAACAAAATTATCCTGAGAGTTTTCTTACCAATTCGTACTGTTTGCACCGTTCAATCAATAATGTAGGATATATTGAACTTTACTATTCAAGGACACAGTTGTACAACATGTTGAACAAATCCTGTTCAAGCAAGGTCTGTAAGATATATTTAACTAAACTATTCTTCTCAAAATTCTTACAATCACGAGGCGAAAACACATCTAGTCTTCTAGCTCAATCAATACCAAGCTTTAGAACGAAATTTGTTGTCCCATACCAAGCCTTATAGATTGCACGCTGTTAGCTATATAGAAGAACACTCATAGTGGGTAGTTTTGAATGAGGGAGCATTTGGAGTTCTGAATTGGTTATTATATTTTGCTGGAATAGTTTATAGGATTTAATAGTCTACCCCACCCAATTTAGGTAGGGGGCTTAAACGCCCGCTAATTGGTTGCTCAATTTACCCACTGATCTAGACTCTTACTTTAATCTTTGAACGTACGAAAGAGGGTGGAAAACCAAATTTTGTTGGGTGACGTATTTTGCTCACCTTTGCATAAGCATAATGATTGATGCATTCTACTTGATGTCTGCATGATTGTGCATTGTTTTCATTCCCTAATAACATTTGCATATATTAATTGATCAGTGTGATTGTTTGTGGATTGAACCCTTTTTGAGACATTATCTTGGGTAAATCTTTCAATTGGTTATGCCCTTCAATGTTCATTTATTGCGTGTTGAATCTGTTTTGCAGACAGCTGAGGCCACAAAAGGAGCAGGCCGGACAATATAGAAGAATGGAACTTGATCAACTATTTCAAATCCTTACCAATGTTATTATTAATTTAAAAAGCTTAATTTATTTTCTAGAGAAGTATAAAACTCCATGA ATGGACGCCATTGATTCCGTCTTCGATCCACTCCGGGAGTTCGCCAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAACCCGATCGCAAAGGTACGAGTTCACAAAGGTCGCGGTTCGTACAGCGATTGGCTTCGTCGTCATGGGATTCGTTGGTTTCTTCGTCAAGCTCATCTTTATCCCCATCAATAACATCATCGTCGGATCTGGCTAGACAGCTGAGGCCACAAAAGGAGCAGGCCGGACAATATAGAAGAATGGAACTTGATCAACTATTTCAAATCCTTACCAATGTTATTATTAATTTAAAAAGCTTAATTTATTTTCTAGAGAAGTATAAAACTCCATGA ATGGACGCCATTGATTCCGTCTTCGATCCACTCCGGGAGTTCGCCAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAACCCGATCGCAAAGGTACGAGTTCACAAAGGTCGCGGTTCGTACAGCGATTGGCTTCGTCGTCATGGGATTCGTTGGTTTCTTCGTCAAGCTCATCTTTATCCCCATCAATAACATCATCGTCGGATCTGGCTAGACAGCTGAGGCCACAAAAGGAGCAGGCCGGACAATATAGAAGAATGGAACTTGATCAACTATTTCAAATCCTTACCAATGTTATTATTAATTTAAAAAGCTTAATTTATTTTCTAGAGAAGTATAAAACTCCATGA MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTSSQRSRFVQRLASSSWDSLVSSSSSSLSPSITSSSDLARQLRPQKEQAGQYRRMELDQLFQILTNVIINLKSLIYFLEKYKTP*
BLAST of Csa1G097740 vs. Swiss-Prot
Match: SC61G_ORYSJ (Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica GN=Os02g0178400 PE=3 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.0e-09 Identity = 29/31 (93.55%), Postives = 28/31 (90.32%), Query Frame = 1
BLAST of Csa1G097740 vs. Swiss-Prot
Match: S61G2_ARATH (Protein transport protein Sec61 subunit gamma-2 OS=Arabidopsis thaliana GN=SEC61G2 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.2e-09 Identity = 28/31 (90.32%), Postives = 28/31 (90.32%), Query Frame = 1
BLAST of Csa1G097740 vs. Swiss-Prot
Match: S61G1_ARATH (Protein transport protein Sec61 subunit gamma-1 OS=Arabidopsis thaliana GN=SEC61G1 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.2e-09 Identity = 28/31 (90.32%), Postives = 28/31 (90.32%), Query Frame = 1
BLAST of Csa1G097740 vs. Swiss-Prot
Match: S61G3_ARATH (Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana GN=SEC61G3 PE=1 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.6e-07 Identity = 25/31 (80.65%), Postives = 26/31 (83.87%), Query Frame = 1
BLAST of Csa1G097740 vs. TrEMBL
Match: A0A0A0LXS8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G097740 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 2.2e-56 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1
BLAST of Csa1G097740 vs. TrEMBL
Match: K3Y480_SETIT (Uncharacterized protein OS=Setaria italica GN=SETIT_009018mg PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 4.0e-13 Identity = 56/109 (51.38%), Postives = 58/109 (53.21%), Query Frame = 1
BLAST of Csa1G097740 vs. TrEMBL
Match: A0A0E0HUE4_ORYNI (Uncharacterized protein OS=Oryza nivara PE=3 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.9e-09 Identity = 40/55 (72.73%), Postives = 41/55 (74.55%), Query Frame = 1
BLAST of Csa1G097740 vs. TrEMBL
Match: A0A0D3GJE5_9ORYZ (Uncharacterized protein OS=Oryza barthii PE=3 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.9e-09 Identity = 40/55 (72.73%), Postives = 41/55 (74.55%), Query Frame = 1
BLAST of Csa1G097740 vs. TrEMBL
Match: A0A0A9DB36_ARUDO (Protein transport protein SEC61 gamma subunit OS=Arundo donax PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.0e-08 Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 1
BLAST of Csa1G097740 vs. TAIR10
Match: AT4G24920.1 (AT4G24920.1 secE/sec61-gamma protein transport protein) HSP 1 Score: 63.2 bits (152), Expect = 1.3e-10 Identity = 28/31 (90.32%), Postives = 28/31 (90.32%), Query Frame = 1
BLAST of Csa1G097740 vs. TAIR10
Match: AT5G50460.1 (AT5G50460.1 secE/sec61-gamma protein transport protein) HSP 1 Score: 63.2 bits (152), Expect = 1.3e-10 Identity = 28/31 (90.32%), Postives = 28/31 (90.32%), Query Frame = 1
BLAST of Csa1G097740 vs. TAIR10
Match: AT3G48570.1 (AT3G48570.1 secE/sec61-gamma protein transport protein) HSP 1 Score: 57.0 bits (136), Expect = 9.0e-09 Identity = 25/31 (80.65%), Postives = 26/31 (83.87%), Query Frame = 1
BLAST of Csa1G097740 vs. NCBI nr
Match: gi|700209700|gb|KGN64796.1| (hypothetical protein Csa_1G097740 [Cucumis sativus]) HSP 1 Score: 226.1 bits (575), Expect = 3.2e-56 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1
BLAST of Csa1G097740 vs. NCBI nr
Match: gi|944246846|gb|KQL11140.1| (hypothetical protein SETIT_009018mg [Setaria italica]) HSP 1 Score: 82.4 bits (202), Expect = 5.7e-13 Identity = 56/109 (51.38%), Postives = 58/109 (53.21%), Query Frame = 1
BLAST of Csa1G097740 vs. NCBI nr
Match: gi|1009151957|ref|XP_015893833.1| (PREDICTED: protein transport protein Sec61 subunit gamma [Ziziphus jujuba]) HSP 1 Score: 67.4 bits (163), Expect = 1.9e-08 Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 1
BLAST of Csa1G097740 vs. NCBI nr
Match: gi|356501180|ref|XP_003519405.1| (PREDICTED: protein transport protein Sec61 subunit gamma [Glycine max]) HSP 1 Score: 67.4 bits (163), Expect = 1.9e-08 Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 1
BLAST of Csa1G097740 vs. NCBI nr
Match: gi|728822123|gb|KHG04662.1| (hypothetical protein F383_02719 [Gossypium arboreum]) HSP 1 Score: 67.4 bits (163), Expect = 1.9e-08 Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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