Csa1G096110 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGTAGACATCCCGAAGAACTCCGAGTTCTTTACCATTTGCTTTATGTCTCAATCATTCTTGCTTTGTTTCTCTTATTTCTTACCGTTTCACAAAAACAAGCTGCATTTTCTTCAGCTGGGTATGCTAGTGGAGCTGCTGTAATTATTGGGTTACTTCTTATGCCTCTATTAATAGCCGTTAGAGAAGAACTCATGCTCTTCAAGCTCAATGGACAAACAGACAAAAACTCATCTCCCGCTGTTTTCACTCCGGAAATGAAAACTTCATCTAGTTCTACAACTAAAAACAATGAATCCTTATCCCCAATTGAAGAAATTCCCGAATTGAATTCACCAACATGTTGCTCAAACATAGTCAACAAGCCAGAACGTGGAGAAGATTTCAGTATCTTACAAGCTCTGTTTAGTAAAGACATGGGGCTTATTTTCGTTGCAACACTTTGTGGGTGTGGTTCATCAATTGCTGCCATTGATAACATCGGCCAAATCGGCGAATCGCTTGGATATCCATCTAAATCCATAAGTATCTTTGTTTCCTGGGTTTCAATATTCAGCTTCTTCGGCAGAGTAGGCTCTGGTTTCATCTCTGAAACACTTATGACAAAATACAAATTACCTCGTCCTTTAATGTTTGCTTTCTCCCATCTTCTCACTTGTATCGGTATGTTGTTCGTCGCCTTCCCGTATCCCGGCTCCATCTATGTAGCTTCGTTGACAATCGGGTTTGGATTCGGAGCGCAAGTACCGATAATTTTTGCAATACTTTCAGAGCTTTTTGGGTTGAAATATTATGCAACAATCTTCAATTGTGCTCAATTAGCAGTCCCAATCGGATCATATGTACTAAATGTGGATGTCATTGGGAAATTGTATGATATTGAAGCAACAAAAGATGGTGGCATTAGGGATGGGAATGGATTGACTTGCAAGGGAGCTCATTGTTTTAGTGGATCATTCTTGGTTTTGGCTGTGGTGGTGTTGATTGGAGGTTTGGCCTCACTTGTGTTGGCATTTAGAACAAGAAATTTTTACAAAGGAGATGTTTATAAGAAGTATAGAGAAGATATGTGGATTCCTCAATCAGATATGGAATTTTATTGTTTGGATGACAAGAAAAAGGTTGTTAACGATAATTTCCCAAGGATTGTTATGCCCCCTAAGTATAATTTTCTCAATGTAATATAGAGAGACAGAGATGTTAAGATTTTTTTTTAATTCATTGTTGAAATCTTCTCATGTATTCTAATTAGTATTCTCAATATAATTATACACATTCTTTTTGTTTAGGTGAATATTTGGAATTCATATAA ATGCGTAGACATCCCGAAGAACTCCGAGTTCTTTACCATTTGCTTTATGTCTCAATCATTCTTGCTTTGTTTCTCTTATTTCTTACCGTTTCACAAAAACAAGCTGCATTTTCTTCAGCTGGGTATGCTAGTGGAGCTGCTGTAATTATTGGGTTACTTCTTATGCCTCTATTAATAGCCGTTAGAGAAGAACTCATGCTCTTCAAGCTCAATGGACAAACAGACAAAAACTCATCTCCCGCTGTTTTCACTCCGGAAATGAAAACTTCATCTAGTTCTACAACTAAAAACAATGAATCCTTATCCCCAATTGAAGAAATTCCCGAATTGAATTCACCAACATGTTGCTCAAACATAGTCAACAAGCCAGAACGTGGAGAAGATTTCAGTGAATATTTGGAATTCATATAA ATGCGTAGACATCCCGAAGAACTCCGAGTTCTTTACCATTTGCTTTATGTCTCAATCATTCTTGCTTTGTTTCTCTTATTTCTTACCGTTTCACAAAAACAAGCTGCATTTTCTTCAGCTGGGTATGCTAGTGGAGCTGCTGTAATTATTGGGTTACTTCTTATGCCTCTATTAATAGCCGTTAGAGAAGAACTCATGCTCTTCAAGCTCAATGGACAAACAGACAAAAACTCATCTCCCGCTGTTTTCACTCCGGAAATGAAAACTTCATCTAGTTCTACAACTAAAAACAATGAATCCTTATCCCCAATTGAAGAAATTCCCGAATTGAATTCACCAACATGTTGCTCAAACATAGTCAACAAGCCAGAACGTGGAGAAGATTTCAGTGAATATTTGGAATTCATATAA MRRHPEELRVLYHLLYVSIILALFLLFLTVSQKQAAFSSAGYASGAAVIIGLLLMPLLIAVREELMLFKLNGQTDKNSSPAVFTPEMKTSSSSTTKNNESLSPIEEIPELNSPTCCSNIVNKPERGEDFSEYLEFI*
BLAST of Csa1G096110 vs. TrEMBL
Match: A0A0A0LVC9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G096110 PE=4 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 3.0e-68 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1
BLAST of Csa1G096110 vs. TrEMBL
Match: A0A0A0LUW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G097645 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 2.5e-22 Identity = 61/128 (47.66%), Postives = 86/128 (67.19%), Query Frame = 1
BLAST of Csa1G096110 vs. TrEMBL
Match: A0A0A0LVD8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G097660 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.9e-19 Identity = 55/128 (42.97%), Postives = 76/128 (59.38%), Query Frame = 1
BLAST of Csa1G096110 vs. TrEMBL
Match: A0A0A0LUU8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G096085 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 2.8e-18 Identity = 51/96 (53.12%), Postives = 68/96 (70.83%), Query Frame = 1
BLAST of Csa1G096110 vs. TrEMBL
Match: A0A118K5L6_CYNCS (Major facilitator superfamily domain, general substrate transporter OS=Cynara cardunculus var. scolymus GN=Ccrd_012306 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 4.8e-18 Identity = 53/133 (39.85%), Postives = 84/133 (63.16%), Query Frame = 1
BLAST of Csa1G096110 vs. TAIR10
Match: AT2G39210.1 (AT2G39210.1 Major facilitator superfamily protein) HSP 1 Score: 83.2 bits (204), Expect = 1.4e-16 Identity = 40/130 (30.77%), Postives = 73/130 (56.15%), Query Frame = 1
BLAST of Csa1G096110 vs. TAIR10
Match: AT2G28120.1 (AT2G28120.1 Major facilitator superfamily protein) HSP 1 Score: 71.6 bits (174), Expect = 4.2e-13 Identity = 43/131 (32.82%), Postives = 66/131 (50.38%), Query Frame = 1
BLAST of Csa1G096110 vs. NCBI nr
Match: gi|700209681|gb|KGN64777.1| (hypothetical protein Csa_1G096110 [Cucumis sativus]) HSP 1 Score: 265.8 bits (678), Expect = 4.3e-68 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1
BLAST of Csa1G096110 vs. NCBI nr
Match: gi|449459150|ref|XP_004147309.1| (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis sativus]) HSP 1 Score: 253.8 bits (647), Expect = 1.7e-64 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 1
BLAST of Csa1G096110 vs. NCBI nr
Match: gi|659072284|ref|XP_008464767.1| (PREDICTED: uncharacterized protein LOC103502570 [Cucumis melo]) HSP 1 Score: 219.2 bits (557), Expect = 4.6e-54 Identity = 109/130 (83.85%), Postives = 119/130 (91.54%), Query Frame = 1
BLAST of Csa1G096110 vs. NCBI nr
Match: gi|449459148|ref|XP_004147308.1| (PREDICTED: uncharacterized protein LOC101204150 [Cucumis sativus]) HSP 1 Score: 135.6 bits (340), Expect = 6.6e-29 Identity = 70/130 (53.85%), Postives = 94/130 (72.31%), Query Frame = 1
BLAST of Csa1G096110 vs. NCBI nr
Match: gi|659072286|ref|XP_008464773.1| (PREDICTED: uncharacterized protein LOC103502580 [Cucumis melo]) HSP 1 Score: 130.6 bits (327), Expect = 2.1e-27 Identity = 68/130 (52.31%), Postives = 91/130 (70.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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