Csa1G077750 (gene) Cucumber (Chinese Long) v2

NameCsa1G077750
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionTransferase, transferring glycosyl groups, putative; contains IPR006740 (Protein of unknown function DUF604)
LocationChr1 : 7967881 .. 7968583 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAAGTATGTAAATATATTCACATGAAAAACCTTGATTAAGGGAACAATGTTGTTTTAATTAGCAACTTTGTATTGATTAGATGAATTAATTTAGCTAATTTGTTGTACTGTTGCATGGCATATATGGTGTAGTATGATGTATATGGAGATCTATTGGGACTTTTAGGGGCTCATCCAGTGACTCCATTGTTATCACTTCACCACCTTGATGTAGTTGAACCAATTTTCCCTAAAATGACTCGAGTGAAAGCCCTTCAACGTCTATTCCAATCCTCAAATCTCGACTCCTCAAGCATAATGCAACAATCTATTTGTTATGATAAGAAACGTTATTGGTCAATTTCTGTTTCTTGGGGATATGTTGTTCAAATCTTGAGAGGTGTAATCTCACCTAGAGAGCTTGAAATGCCCACAAGAACCTTTCTCAATTGGTATAGAAGAGCAGATTACACTGCTTATGCTTTCAACACTAGACCAGTCACAAAGCACCCTTGTCAAAAGCCATTCATATTCTACATGGGGACTACGCGTTATGATCGAACCAAAAAGCAAACTGTTGGTATTTATATTCGCGATAAGTCTCGTCACCCTTTTTGCCGTTGGAAAATGAGTTCGCCAGATAAAATTGACTCTGTTATTATCTTGAAGAAGCCCGATCCTTATCGATGGCAAAAGGTAAATCTTCAAATTTTTTACTAA

mRNA sequence

ATGTTAAGTATAACCTTTCTCAATTGGTATAGAAGAGCAGATTACACTGCTTATGCTTTCAACACTAGACCAGTCACAAAGCACCCTTGTCAAAAGCCATTCATATTCTACATGGGGACTACGCGTTATGATCGAACCAAAAAGCAAACTGTTGGTATTTATATTCGCGATAAGTCTCGTCACCCTTTTTGCCGTTGGAAAATGAGTTCGCCAGATAAAATTGACTCTGTTATTATCTTGAAGAAGCCCGATCCTTATCGATGGCAAAAGGTAAATCTTCAAATTTTTTACTAA

Coding sequence (CDS)

ATGTTAAGTATAACCTTTCTCAATTGGTATAGAAGAGCAGATTACACTGCTTATGCTTTCAACACTAGACCAGTCACAAAGCACCCTTGTCAAAAGCCATTCATATTCTACATGGGGACTACGCGTTATGATCGAACCAAAAAGCAAACTGTTGGTATTTATATTCGCGATAAGTCTCGTCACCCTTTTTGCCGTTGGAAAATGAGTTCGCCAGATAAAATTGACTCTGTTATTATCTTGAAGAAGCCCGATCCTTATCGATGGCAAAAGGTAAATCTTCAAATTTTTTACTAA

Protein sequence

MLSITFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVGIYIRDKSRHPFCRWKMSSPDKIDSVIILKKPDPYRWQKVNLQIFY*
BLAST of Csa1G077750 vs. TrEMBL
Match: A0A0A0LUP8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G077750 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.1e-52
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1

Query: 1  MLSITFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVGIYIRDKSR 60
          MLSITFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVGIYIRDKSR
Sbjct: 1  MLSITFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVGIYIRDKSR 60

Query: 61 HPFCRWKMSSPDKIDSVIILKKPDPYRWQKVNLQIFY 98
          HPFCRWKMSSPDKIDSVIILKKPDPYRWQKVNLQIFY
Sbjct: 61 HPFCRWKMSSPDKIDSVIILKKPDPYRWQKVNLQIFY 97

BLAST of Csa1G077750 vs. TrEMBL
Match: W9SIF1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011181 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.3e-38
Identity = 68/86 (79.07%), Postives = 78/86 (90.70%), Query Frame = 1

Query: 5   TFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVGIYIRDKSRHPFC 64
           TFLNWY RADYTAYAFNTRPVTKHPCQKPF+FYM   RYDR+K+Q VG+Y RD+SRHP+C
Sbjct: 393 TFLNWYPRADYTAYAFNTRPVTKHPCQKPFVFYMNNVRYDRSKRQVVGVYARDRSRHPYC 452

Query: 65  RWKMSSPDKIDSVIILKKPDPYRWQK 91
           RWKM SPDKIDS+++LK+PDP RWQK
Sbjct: 453 RWKMESPDKIDSIVVLKRPDPLRWQK 478

BLAST of Csa1G077750 vs. TrEMBL
Match: A0A0B2R9J6_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_010603 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 8.1e-36
Identity = 67/90 (74.44%), Postives = 76/90 (84.44%), Query Frame = 1

Query: 1   MLSITFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVGIYIRDKSR 60
           M S TFLNWYRRADYTAYAFNTRPV KHPCQKPF++YM  T YD T KQ VG+Y RDKS+
Sbjct: 423 MPSRTFLNWYRRADYTAYAFNTRPVAKHPCQKPFVYYMNNTHYDSTTKQVVGVYSRDKSK 482

Query: 61  HPFCRWKMSSPDKIDSVIILKKPDPYRWQK 91
            PFCRW+M+SPDKI SV++ KKPDP RW+K
Sbjct: 483 SPFCRWRMNSPDKITSVVVTKKPDPLRWKK 512

BLAST of Csa1G077750 vs. TrEMBL
Match: K7M399_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G330300 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.4e-35
Identity = 66/90 (73.33%), Postives = 76/90 (84.44%), Query Frame = 1

Query: 1   MLSITFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVGIYIRDKSR 60
           M S TFLNWYRRADYTAYAFNTRPV KHPCQKPF++YM  T YD T KQ VG+Y RDKS+
Sbjct: 423 MPSRTFLNWYRRADYTAYAFNTRPVAKHPCQKPFVYYMNNTHYDSTTKQVVGVYSRDKSK 482

Query: 61  HPFCRWKMSSPDKIDSVIILKKPDPYRWQK 91
            PFCRW+M+SP+KI SV++ KKPDP RW+K
Sbjct: 483 SPFCRWRMNSPEKITSVVVTKKPDPLRWKK 512

BLAST of Csa1G077750 vs. TrEMBL
Match: F6GTW3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g03680 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.4e-35
Identity = 65/86 (75.58%), Postives = 75/86 (87.21%), Query Frame = 1

Query: 5   TFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVGIYIRDKSRHPFC 64
           TFLNWYR+ADYTAYAFNTRPVTKHPCQKPFIFYM TTR DR ++QTVG+Y R + RHP C
Sbjct: 335 TFLNWYRKADYTAYAFNTRPVTKHPCQKPFIFYMSTTRLDRARRQTVGVYSRHRGRHPAC 394

Query: 65  RWKMSSPDKIDSVIILKKPDPYRWQK 91
           RWKM SP+KIDS+ +LK+PD  RWQ+
Sbjct: 395 RWKMDSPEKIDSITVLKRPDDLRWQR 420

BLAST of Csa1G077750 vs. TAIR10
Match: AT1G07850.1 (AT1G07850.1 Protein of unknown function (DUF604))

HSP 1 Score: 132.1 bits (331), Expect = 1.9e-31
Identity = 54/91 (59.34%), Postives = 70/91 (76.92%), Query Frame = 1

Query: 1   MLSITFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVGIYIRDKSR 60
           M S TFLNW+R+ADY  YAFNTRPV++HPCQ+PF+FY+ + +YD  ++Q +G Y  DK+R
Sbjct: 412 MPSRTFLNWFRKADYIGYAFNTRPVSRHPCQRPFVFYLNSAKYDEGRRQVIGYYNLDKTR 471

Query: 61  H-PFCRWKMSSPDKIDSVIILKKPDPYRWQK 91
             P CRW++ SP KIDSV++LK+PDP RW K
Sbjct: 472 RIPGCRWRLDSPGKIDSVVVLKRPDPLRWHK 502

BLAST of Csa1G077750 vs. TAIR10
Match: AT5G41460.1 (AT5G41460.1 Protein of unknown function (DUF604))

HSP 1 Score: 128.3 bits (321), Expect = 2.7e-30
Identity = 56/90 (62.22%), Postives = 65/90 (72.22%), Query Frame = 1

Query: 1   MLSITFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVGIYIRDKSR 60
           M S TFLNWYRRADYTAYAFNTRPV++HPCQKPF+FYM +TR  R    TV  Y   +  
Sbjct: 402 MPSRTFLNWYRRADYTAYAFNTRPVSRHPCQKPFVFYMTSTRVHRVTNMTVSRYEIHRVA 461

Query: 61  HPFCRWKMSSPDKIDSVIILKKPDPYRWQK 91
           HP CRWKM++P  I +VI+ KKPDP+ W +
Sbjct: 462 HPECRWKMANPSDIKTVIVYKKPDPHLWDR 491

BLAST of Csa1G077750 vs. TAIR10
Match: AT4G23490.1 (AT4G23490.1 Protein of unknown function (DUF604))

HSP 1 Score: 127.5 bits (319), Expect = 4.6e-30
Identity = 51/90 (56.67%), Postives = 70/90 (77.78%), Query Frame = 1

Query: 1   MLSITFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVGIYIRDKSR 60
           M S TFLNWY+RADYTAYAFNTRPV+++PCQKPF+FYM +T++D+    TV  Y   +  
Sbjct: 403 MPSRTFLNWYKRADYTAYAFNTRPVSRNPCQKPFVFYMSSTKFDQQLNTTVSEYTIHRVS 462

Query: 61  HPFCRWKMSSPDKIDSVIILKKPDPYRWQK 91
           HP CRWKM++P +I+++++ KKPDP+ W++
Sbjct: 463 HPSCRWKMTNPAEINTIVVYKKPDPHLWER 492

BLAST of Csa1G077750 vs. TAIR10
Match: AT4G11350.1 (AT4G11350.1 Protein of unknown function (DUF604))

HSP 1 Score: 117.1 bits (292), Expect = 6.2e-27
Identity = 47/90 (52.22%), Postives = 66/90 (73.33%), Query Frame = 1

Query: 1   MLSITFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVGIYIRDKSR 60
           M S TFLNWY+RADYTAYAFNTRPV+++ CQKPF+F+M + ++D     TV  Y R +  
Sbjct: 384 MPSRTFLNWYKRADYTAYAFNTRPVSRNHCQKPFVFHMSSAKFDPQLNTTVSEYTRHRVP 443

Query: 61  HPFCRWKMSSPDKIDSVIILKKPDPYRWQK 91
            P CRW M++P++I+++++ KKPDP+ W +
Sbjct: 444 QPACRWDMANPEEINTIVVYKKPDPHLWNR 473

BLAST of Csa1G077750 vs. TAIR10
Match: AT1G01570.1 (AT1G01570.1 Protein of unknown function (DUF604))

HSP 1 Score: 89.0 bits (219), Expect = 1.8e-18
Identity = 38/87 (43.68%), Postives = 52/87 (59.77%), Query Frame = 1

Query: 5   TFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVGIYIRDKSR-HPF 64
           TF++WY++AD  +YAFNTRP+ K  CQ+P ++Y+     D   ++T   Y+R      P 
Sbjct: 354 TFIDWYKQADERSYAFNTRPIAKSACQRPRVYYLSNALPDLALRRTASEYVRWYDMWEPE 413

Query: 65  CRWKMSSPDKIDSVIILKKPDPYRWQK 91
           C W MS P + + VI+ KKPDP RW K
Sbjct: 414 CDWDMSDPSEFERVIVYKKPDPDRWNK 440

BLAST of Csa1G077750 vs. NCBI nr
Match: gi|700209628|gb|KGN64724.1| (hypothetical protein Csa_1G077750 [Cucumis sativus])

HSP 1 Score: 212.6 bits (540), Expect = 3.1e-52
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1

Query: 1  MLSITFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVGIYIRDKSR 60
          MLSITFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVGIYIRDKSR
Sbjct: 1  MLSITFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVGIYIRDKSR 60

Query: 61 HPFCRWKMSSPDKIDSVIILKKPDPYRWQKVNLQIFY 98
          HPFCRWKMSSPDKIDSVIILKKPDPYRWQKVNLQIFY
Sbjct: 61 HPFCRWKMSSPDKIDSVIILKKPDPYRWQKVNLQIFY 97

BLAST of Csa1G077750 vs. NCBI nr
Match: gi|449462119|ref|XP_004148789.1| (PREDICTED: uncharacterized protein LOC101218166 [Cucumis sativus])

HSP 1 Score: 192.2 bits (487), Expect = 4.3e-46
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1

Query: 5   TFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVGIYIRDKSRHPFC 64
           TFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVGIYIRDKSRHPFC
Sbjct: 427 TFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVGIYIRDKSRHPFC 486

Query: 65  RWKMSSPDKIDSVIILKKPDPYRWQK 91
           RWKMSSPDKIDSVIILKKPDPYRWQK
Sbjct: 487 RWKMSSPDKIDSVIILKKPDPYRWQK 512

BLAST of Csa1G077750 vs. NCBI nr
Match: gi|659130681|ref|XP_008465293.1| (PREDICTED: uncharacterized protein LOC103502944 [Cucumis melo])

HSP 1 Score: 191.4 bits (485), Expect = 7.3e-46
Identity = 84/86 (97.67%), Postives = 86/86 (100.00%), Query Frame = 1

Query: 5   TFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVGIYIRDKSRHPFC 64
           TFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVG+YIRDKSRHPFC
Sbjct: 425 TFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVGVYIRDKSRHPFC 484

Query: 65  RWKMSSPDKIDSVIILKKPDPYRWQK 91
           RWKMSSPDKIDS+IILKKPDPYRWQK
Sbjct: 485 RWKMSSPDKIDSIIILKKPDPYRWQK 510

BLAST of Csa1G077750 vs. NCBI nr
Match: gi|703159697|ref|XP_010112315.1| (hypothetical protein L484_011181 [Morus notabilis])

HSP 1 Score: 166.8 bits (421), Expect = 1.9e-38
Identity = 68/86 (79.07%), Postives = 78/86 (90.70%), Query Frame = 1

Query: 5   TFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVGIYIRDKSRHPFC 64
           TFLNWY RADYTAYAFNTRPVTKHPCQKPF+FYM   RYDR+K+Q VG+Y RD+SRHP+C
Sbjct: 393 TFLNWYPRADYTAYAFNTRPVTKHPCQKPFVFYMNNVRYDRSKRQVVGVYARDRSRHPYC 452

Query: 65  RWKMSSPDKIDSVIILKKPDPYRWQK 91
           RWKM SPDKIDS+++LK+PDP RWQK
Sbjct: 453 RWKMESPDKIDSIVVLKRPDPLRWQK 478

BLAST of Csa1G077750 vs. NCBI nr
Match: gi|734397470|gb|KHN30225.1| (hypothetical protein glysoja_010603 [Glycine soja])

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-35
Identity = 67/90 (74.44%), Postives = 76/90 (84.44%), Query Frame = 1

Query: 1   MLSITFLNWYRRADYTAYAFNTRPVTKHPCQKPFIFYMGTTRYDRTKKQTVGIYIRDKSR 60
           M S TFLNWYRRADYTAYAFNTRPV KHPCQKPF++YM  T YD T KQ VG+Y RDKS+
Sbjct: 423 MPSRTFLNWYRRADYTAYAFNTRPVAKHPCQKPFVYYMNNTHYDSTTKQVVGVYSRDKSK 482

Query: 61  HPFCRWKMSSPDKIDSVIILKKPDPYRWQK 91
            PFCRW+M+SPDKI SV++ KKPDP RW+K
Sbjct: 483 SPFCRWRMNSPDKITSVVVTKKPDPLRWKK 512

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LUP8_CUCSA2.1e-52100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G077750 PE=4 SV=1[more]
W9SIF1_9ROSA1.3e-3879.07Uncharacterized protein OS=Morus notabilis GN=L484_011181 PE=4 SV=1[more]
A0A0B2R9J6_GLYSO8.1e-3674.44Uncharacterized protein OS=Glycine soja GN=glysoja_010603 PE=4 SV=1[more]
K7M399_SOYBN2.4e-3573.33Uncharacterized protein OS=Glycine max GN=GLYMA_13G330300 PE=4 SV=1[more]
F6GTW3_VITVI2.4e-3575.58Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g03680 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT1G07850.11.9e-3159.34 Protein of unknown function (DUF604)[more]
AT5G41460.12.7e-3062.22 Protein of unknown function (DUF604)[more]
AT4G23490.14.6e-3056.67 Protein of unknown function (DUF604)[more]
AT4G11350.16.2e-2752.22 Protein of unknown function (DUF604)[more]
AT1G01570.11.8e-1843.68 Protein of unknown function (DUF604)[more]
Match NameE-valueIdentityDescription
gi|700209628|gb|KGN64724.1|3.1e-52100.00hypothetical protein Csa_1G077750 [Cucumis sativus][more]
gi|449462119|ref|XP_004148789.1|4.3e-46100.00PREDICTED: uncharacterized protein LOC101218166 [Cucumis sativus][more]
gi|659130681|ref|XP_008465293.1|7.3e-4697.67PREDICTED: uncharacterized protein LOC103502944 [Cucumis melo][more]
gi|703159697|ref|XP_010112315.1|1.9e-3879.07hypothetical protein L484_011181 [Morus notabilis][more]
gi|734397470|gb|KHN30225.1|1.2e-3574.44hypothetical protein glysoja_010603 [Glycine soja][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006740DUF604
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005730 nucleolus
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016740 transferase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003899 DNA-directed RNA polymerase activity
molecular_function GO:0032549 ribonucleoside binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G077750.1Csa1G077750.1mRNA


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006740Protein of unknown function DUF604PFAMPF04646DUF604coord: 4..91
score: 3.2
NoneNo IPR availablePANTHERPTHR10811FRINGE-RELATEDcoord: 1..90
score: 8.7
NoneNo IPR availablePANTHERPTHR10811:SF27SUBFAMILY NOT NAMEDcoord: 1..90
score: 8.7