Csa1G077200 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G077200
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 7921314 .. 7921487 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAAAAAACTCGTCGACCCAACCCGACTTCTTTTAGTTATTTTGGGTTGGGTTCGACCTTTGCTTATTGAACCAATAGGTTCCTCCTCAGTCGTCTTTCTTCTCCATCTCTACTCTAAGGCAACTCGGCGCCGGCCGTCATCGCTCAATTGCTCAGTGCAATTGTTTTGA

mRNA sequence

ATGAAAAAAAAACTCGTCGACCCAACCCGACTTCTTTTAGTTATTTTGGGTTGGGTTCGACCTTTGCTTATTGAACCAATAGGTTCCTCCTCAGTCGTCTTTCTTCTCCATCTCTACTCTAAGGCAACTCGGCGCCGGCCGTCATCGCTCAATTGCTCAGTGCAATTGTTTTGA

Coding sequence (CDS)

ATGAAAAAAAAACTCGTCGACCCAACCCGACTTCTTTTAGTTATTTTGGGTTGGGTTCGACCTTTGCTTATTGAACCAATAGGTTCCTCCTCAGTCGTCTTTCTTCTCCATCTCTACTCTAAGGCAACTCGGCGCCGGCCGTCATCGCTCAATTGCTCAGTGCAATTGTTTTGA

Protein sequence

MKKKLVDPTRLLLVILGWVRPLLIEPIGSSSVVFLLHLYSKATRRRPSSLNCSVQLF*
Homology
[Close]
BLAST of Csa1G077200 vs. TrEMBL
Match: A0A0A0LSG0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G077200 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 4.7e-23
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1 

Query: 1  MKKKLVDPTRLLLVILGWVRPLLIEPIGSSSVVFLLHLYSKATRRRPSSLNCSVQLF 58
          MKKKLVDPTRLLLVILGWVRPLLIEPIGSSSVVFLLHLYSKATRRRPSSLNCSVQLF
Sbjct: 1  MKKKLVDPTRLLLVILGWVRPLLIEPIGSSSVVFLLHLYSKATRRRPSSLNCSVQLF 57

[Close]
BLAST of Csa1G077200 vs. NCBI nr
Match: gi|700209622|gb|KGN64718.1| (hypothetical protein Csa_1G077200 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 6.7e-23
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1 

Query: 1  MKKKLVDPTRLLLVILGWVRPLLIEPIGSSSVVFLLHLYSKATRRRPSSLNCSVQLF 58
          MKKKLVDPTRLLLVILGWVRPLLIEPIGSSSVVFLLHLYSKATRRRPSSLNCSVQLF
Sbjct: 1  MKKKLVDPTRLLLVILGWVRPLLIEPIGSSSVVFLLHLYSKATRRRPSSLNCSVQLF 57

The following BLAST results are available for this feature:
BLAST of Csa1G077200 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSG0_CUCSA4.7e-23100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G077200 PE=4 SV=1[more]
BLAST of Csa1G077200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209622|gb|KGN64718.1|6.7e-23100.00hypothetical protein Csa_1G077200 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G077200.1Csa1G077200.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G077200Melon (DHL92) v3.5.1cumeB001
Csa1G077200Watermelon (Charleston Gray)cuwcgB037
Csa1G077200Watermelon (97103) v1cuwmB010
Csa1G077200Bottle gourd (USVL1VR-Ls)culsiB024
Csa1G077200Cucumber (Gy14) v2cgybcuB001
Csa1G077200Melon (DHL92) v3.6.1cumedB010
Csa1G077200Watermelon (97103) v2cuwmbB034
Csa1G077200Wax gourdcuwgoB042
Csa1G077200Cucumber (Gy14) v1cgycuB170