Csa1G075050 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G075050
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionYippee family protein; contains IPR004910 (Yippee-like protein)
LocationChr1 : 7730711 .. 7733403 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTACTGGCAATTGGCATCTCAAAAAACTGACCACGCATGAGAAAGGCTTCAAGTTCGTTATTTTGATTATGATTATCTCTTTGACCCAGAGGAGGGGAATGATTTTTGTTTCTGTGAGAGCTTAGTTTAGTTTCTCAATTTGGGATTTCTAGGGTTTTAATGGGTAGGGTTTTTCTCGTTGAATTGGAAGGCAGGTCCTACAGATGCCGCTTCTGTAACAACAATGTTGCTCTTGCCGATGACGTCCTCTCTCGAGTACTTTCATCTCTTCTCCTCTTCCCCTTCTTTATTTCCCCTCCCAATTCTCCCATACATCCTACAATTTTCTTTCTTCAATTTCCACCCGCAACTCCACTTTATTTGCTCCTTTCGAATTATTGGTTTCGATTGATTTGTCTTGTATTAGCGTCTGGGTTGCTGGTTTAATTCATATTTCGTTCGTATTTTATTCCAATTTTGCTGTTTGGGCCGTGTGTTGTTAATTGGAATCTCAAAGCCTATGTTGGTTGCATGCTTAATTTGTCTGTTGTAACTACTTGGCGTTAAACTAATGCTACTAAGTCTCAAGTGCTAAATTGGAATTATAGTTCCCACGATATTACGATTGATTTCCTATTATATCTTTGAGATTGTTAGCGGATGGTTGATCTTAACGCTGCTGTATATTGTCATAATGTTGTATTTGTAGCTCTCTTTTTTGGCATAATTCTATCGACTCACTTGCCCATTTTGATGAACTTTTATGGTTCTGTTTTTCTCCCAGACTTTCAATTGCAGCCAAGGGAGGGCGTATCTTTTCAGCAATGTGTGAGTTGCCCTGTTCTGATTTTTATTTTATTTTCATGTGCAGCTTTAACGTCTACTTTTTAAATGTCTTGTGGTAGTTCGGGCTTTTACCATCTCTTTTTAAGCAGGCTTCATAATTAAAAAATTACAGTAATTGTTAGTTATCCTCAATATTTTCATTTCTCCTCTTTTCTTGTGCCTTTCCGATACAATAATCGAATTCAATGACCTTACTTTGATCTGTTTCTGACCACAAGTCTACAATTTAACATATATTGAAATACTTTTACCTTTTGCCAGAGTGAATATAACATCTGGACCCAAGGAGGAGAGGTTGATGCTTTCTGGTATGCACATTGTGGAAGATATCTTTTGTTGCATTTGCGGACAAATTCTTGGATGGAAATATGTAAATTTTCTCCACTCATTATCTTTGCAAAGTGATTTGGTTTCCACCATCTTTAATAGAACTGATGACTGTTCAGTAGTTGGAATCATCACGAACTGGCTCAATTGTTAAAGGAGGGAGTTATAACTCATTTAATTTTGGGGTTGTGTTATCAACTCTCTATCCCATGCATTTATCAACTCTCTATCCCATGCATGTGTCAACTTTCAAAATTATAAGATTAAGACAATCCACTGGAACTAGTTCTGGTGAGCAGAAGTTGGTAGATGGGGAAGGGAGGGAGGGAGAAATCTCTTGGAAGGAGCCGGCACATGCATAGCTCAGCTTTTAATATAATTTGTAGCATAAGACGAGCTAAGAGAAGGAGTGCCTTCACTCAACTTCTACATTCCTAATTATGAATAATGAAAAGCATGACAGACAAACTACTGAATTCATGCTTAGTGCATATGTAATATTCATTTCTGAGGAGGACATATAGAAAACAATAATATACGTAATAAAAATATCACAAATGGCTGTAAATGCAATAAGGAAGGCAAGGTACAACACTCATGTCTGCGTGGCTGGTTGGTTGGCTGGCTGTCTGCTGGGCCTATCTCAACTTGAGCAGCTAAATAGGCAGGTTCAGATTTAAGCAGCAGTTAATATGCTGTTTGAAAGAAAAAAAATCTATCTTTCAATTGTTAGCCACTACCAGACAGGGTTAGTTGAAAGCTTCTCCAATATATGCATGGGTATGAATGTGATAATACATTTCATCTGCGTGAATTCTGAAATAACATTAGACTAGAGTTGAAGTTGAAAATGGTGTAATTTATTATGGTTTGTATCTGAAAACATTTGTGGGTTTTTGTTTTACTGAATGAATTTTCTGTTGACTTATTGACTGGAGTATTAGTTTGGTAGATTGATGTTGCTGAATTTCAATAGGTAACTACACACGACAAATATCAAAAGTACAAGGAGGGGAAATTTGTTCTTGAGAGGTACACAGACATTTTCCTCATCTTTTCAAATACCACAAAGTTTTCTGTAAATATATAATTTGTCCTCAGTTTGTTTATACCTCTAACAGATGGAGAATAGTTGAGGAGATGATGGAAGACTTAAACGGAGATGCTCATCCTGGTTCAAGCGATATGGAAAATCCTTAGTGAGTTTCTGCCATATTCTCTCAGAATGAGGAAATTGAAGCGTGCATGTCAAAGTGTTGTATGTAGAAACAATTATAGAGGCTGTAGAACTACTATTGAAATGCATGACCATAATCTATAATATCATAAGCTTATTCTAGAATGGTGTCTTGAATGCTCTATTCTCTCTCCCCTCCTACAATCCCTCTTCATACAGTACTAAGAACATCCCTGTAGATAGCTGATGGAACCAACAAAGATAATTTTGTTTCTAGTTTATTAAAAATGTATGTTTCACAATCCCATTTGTAAAAAACAGTATATGAACTCATTCTTATATACCAAACAACAAATTTTACTCT

mRNA sequence

ATGGGTAGGGTTTTTCTCGTTGAATTGGAAGGCAGGTCCTACAGATGCCGCTTCTGTAACAACAATGTTGCTCTTGCCGATGACGTCCTCTCTCGAACTTTCAATTGCAGCCAAGGGAGGGCGTATCTTTTCAGCAATGTAGTGAATATAACATCTGGACCCAAGGAGGAGAGGTTGATGCTTTCTGGTATGCACATTGTGGAAGATATCTTTTGTTGCATTTGCGGACAAATTCTTGGATGGAAATATGTAACTACACACGACAAATATCAAAAGTACAAGGAGGGGAAATTTGTTCTTGAGAGATGGAGAATAGTTGAGGAGATGATGGAAGACTTAAACGGAGATGCTCATCCTGGTTCAAGCGATATGGAAAATCCTTAG

Coding sequence (CDS)

ATGGGTAGGGTTTTTCTCGTTGAATTGGAAGGCAGGTCCTACAGATGCCGCTTCTGTAACAACAATGTTGCTCTTGCCGATGACGTCCTCTCTCGAACTTTCAATTGCAGCCAAGGGAGGGCGTATCTTTTCAGCAATGTAGTGAATATAACATCTGGACCCAAGGAGGAGAGGTTGATGCTTTCTGGTATGCACATTGTGGAAGATATCTTTTGTTGCATTTGCGGACAAATTCTTGGATGGAAATATGTAACTACACACGACAAATATCAAAAGTACAAGGAGGGGAAATTTGTTCTTGAGAGATGGAGAATAGTTGAGGAGATGATGGAAGACTTAAACGGAGATGCTCATCCTGGTTCAAGCGATATGGAAAATCCTTAG

Protein sequence

MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLMLSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPGSSDMENP*
Homology
[Close]
BLAST of Csa1G075050 vs. Swiss-Prot
Match: YIPL7_ARATH (Protein yippee-like At5g53940 OS=Arabidopsis thaliana GN=At5g53940 PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.2e-42
Identity = 81/128 (63.28%), Postives = 99/128 (77.34%), Query Frame = 1 

Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGR+F VELEGRSYRCRFC  ++AL DD++SR+F+C +G+AYLF+  VNI+ GP EERLM
Sbjct: 1   MGRIFTVELEGRSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEE--MMEDLNGDAH 120
           LSGMH V DIFCC CGQ +GWKY + H+K QKYKEGKFVLER RIV+E  +  ++  D H
Sbjct: 61  LSGMHTVADIFCCCCGQNVGWKYESAHEKAQKYKEGKFVLERGRIVDEIDLSTEVYIDTH 120

Query: 121 PGSSDMEN 127
             +SD E+
Sbjct: 121 GSTSDTED 128

[Close]
BLAST of Csa1G075050 vs. Swiss-Prot
Match: YIPL1_ARATH (Protein yippee-like At3g08990 OS=Arabidopsis thaliana GN=At3g08990 PE=2 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 5.4e-33
Identity = 57/106 (53.77%), Postives = 81/106 (76.42%), Query Frame = 1 

Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGR+F+++LEG  Y C++C  + A+ +D++S++F+C  GRAYLF NVVN+T G KE R+M
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIV 107
           ++G H V DIFC  CG ++GWKY   +DK QKYKEGKF+LER++++
Sbjct: 61  ITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVL 106

[Close]
BLAST of Csa1G075050 vs. Swiss-Prot
Match: YIPL_SOLTU (Protein yippee-like OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 5.4e-33
Identity = 60/105 (57.14%), Postives = 82/105 (78.10%), Query Frame = 1 

Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGR+F++ LEG+ Y C+ C  ++AL+++++S++F+C  G+AYLFS VVN+TSG  E R+M
Sbjct: 1   MGRLFVLTLEGKIYSCKHCGTHLALSENIVSKSFHCKHGKAYLFSKVVNVTSGEIENRMM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRI 106
           ++GMH V DIFC  CG I+GWKY T H+K QKYKEGK VLER++I
Sbjct: 61  MTGMHTVADIFCVCCGSIVGWKYETAHEKSQKYKEGKSVLERFKI 105

[Close]
BLAST of Csa1G075050 vs. Swiss-Prot
Match: YIPL3_ARATH (Protein yippee-like At3g11230 OS=Arabidopsis thaliana GN=At3g11230 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.3e-31
Identity = 60/105 (57.14%), Postives = 78/105 (74.29%), Query Frame = 1 

Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGR+FLV LEG+SY C+ C  N+AL DDV+S++F    G+AYLFS VVN+ +G KE+R+M
Sbjct: 1   MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRI 106
           ++GMH V DI+C  CG  +GWKY    +K QKYKEGK VLER+++
Sbjct: 61  MTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKV 105

[Close]
BLAST of Csa1G075050 vs. Swiss-Prot
Match: YIPL4_ARATH (Protein yippee-like At3g55890 OS=Arabidopsis thaliana GN=At3g55890 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.3e-30
Identity = 57/105 (54.29%), Postives = 77/105 (73.33%), Query Frame = 1 

Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGRVF+V+LEG  Y C+ C  +++   D++S++F C  GRAYLF+NVVN++ G KE+R+M
Sbjct: 1   MGRVFMVDLEGNIYICKLCKTHLSTDQDIMSKSFQCKNGRAYLFNNVVNVSVGEKEDRMM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRI 106
           ++G+H V DIFC  CG  +GWKY   H+K QKYKEGK VLE ++I
Sbjct: 61  ITGLHNVVDIFCVGCGSNVGWKYEFAHEKSQKYKEGKSVLELYKI 105

[Close]
BLAST of Csa1G075050 vs. TrEMBL
Match: A0A0A0LRZ0_CUCSA (Protein yippee-like OS=Cucumis sativus GN=Csa_1G075050 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 1.5e-69
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1 

Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM
Sbjct: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120
           LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG
Sbjct: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120

Query: 121 SSDMENP 128
           SSDMENP
Sbjct: 121 SSDMENP 127

[Close]
BLAST of Csa1G075050 vs. TrEMBL
Match: A0A059CE49_EUCGR (Protein yippee-like OS=Eucalyptus grandis GN=EUGRSUZ_D00603 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.9e-53
Identity = 98/127 (77.17%), Postives = 113/127 (88.98%), Query Frame = 1 

Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGRVFLVEL GR+YRCRFCN+ +ALADDVLS++FNC QGRA+LF+ VVN+T G +EERLM
Sbjct: 1   MGRVFLVELGGRAYRCRFCNSPLALADDVLSKSFNCRQGRAFLFTKVVNVTVGGEEERLM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120
           L+GMH VED+FCC CGQILGWKYV  HDK QKYKEGKFVLERWRI+EE+ ED N +AHPG
Sbjct: 61  LTGMHTVEDVFCCCCGQILGWKYVAAHDKSQKYKEGKFVLERWRIMEEVTEDFNLEAHPG 120

Query: 121 SSDMENP 128
           SSD+ENP
Sbjct: 121 SSDVENP 127

[Close]
BLAST of Csa1G075050 vs. TrEMBL
Match: W9SVT3_9ROSA (Protein yippee-like OS=Morus notabilis GN=L484_015073 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 9.9e-50
Identity = 92/126 (73.02%), Postives = 110/126 (87.30%), Query Frame = 1 

Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGR+FLVELEGR+YRC+ C++ +ALAD+VLSRTFNC +GRAYLF++V+N+  GP+EERLM
Sbjct: 1   MGRIFLVELEGRAYRCKLCDSPLALADEVLSRTFNCRKGRAYLFNSVINVMMGPQEERLM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120
           LSG+H VEDI+CC CGQILGWKYV  HDK QKYKEGKFVLERWRI E+  ++LN DA PG
Sbjct: 61  LSGLHTVEDIYCCCCGQILGWKYVIAHDKDQKYKEGKFVLERWRIDEDADDELNLDARPG 120

Query: 121 SSDMEN 127
           SSD EN
Sbjct: 121 SSDAEN 126

[Close]
BLAST of Csa1G075050 vs. TrEMBL
Match: V4TQ69_9ROSI (Protein yippee-like OS=Citrus clementina GN=CICLE_v10017171mg PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 4.2e-48
Identity = 93/128 (72.66%), Postives = 110/128 (85.94%), Query Frame = 1 

Query: 1   MGRVFLVELEGRSY-RCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERL 60
           MGR+FLVEL+GRSY +CRFCN+++ALAD VLS +FNC +GRAYLFS+VVNI  GP+EERL
Sbjct: 1   MGRIFLVELKGRSYYKCRFCNSHLALADSVLSWSFNCRRGRAYLFSDVVNIMLGPQEERL 60

Query: 61  MLSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHP 120
           MLSGMH VEDIFCC CGQI+GWKYV  HDK QKYKEGKFVLERWRIVEE+ E+L+ + H 
Sbjct: 61  MLSGMHTVEDIFCCCCGQIVGWKYVAAHDKNQKYKEGKFVLERWRIVEEVTEELSLETHT 120

Query: 121 GSSDMENP 128
            S++ E P
Sbjct: 121 HSNEAETP 128

[Close]
BLAST of Csa1G075050 vs. TrEMBL
Match: A0A067GQS3_CITSI (Protein yippee-like OS=Citrus sinensis GN=CISIN_1g032714mg PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 4.2e-48
Identity = 93/128 (72.66%), Postives = 110/128 (85.94%), Query Frame = 1 

Query: 1   MGRVFLVELEGRSY-RCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERL 60
           MGR+FLVEL+GRSY +CRFCN+++ALAD VLS +FNC +GRAYLFS+VVNI  GP+EERL
Sbjct: 1   MGRIFLVELKGRSYYKCRFCNSHLALADSVLSWSFNCRRGRAYLFSDVVNIMLGPQEERL 60

Query: 61  MLSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHP 120
           MLSGMH VEDIFCC CGQI+GWKYV  HDK QKYKEGKFVLERWRIVEE+ E+L+ + H 
Sbjct: 61  MLSGMHTVEDIFCCCCGQIVGWKYVAAHDKNQKYKEGKFVLERWRIVEEVTEELSLETHT 120

Query: 121 GSSDMENP 128
            S++ E P
Sbjct: 121 HSNEAETP 128

[Close]
BLAST of Csa1G075050 vs. TAIR10
Match: AT5G53940.1 (AT5G53940.1 Yippee family putative zinc-binding protein)

HSP 1 Score: 172.9 bits (437), Expect = 1.2e-43
Identity = 81/128 (63.28%), Postives = 99/128 (77.34%), Query Frame = 1 

Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGR+F VELEGRSYRCRFC  ++AL DD++SR+F+C +G+AYLF+  VNI+ GP EERLM
Sbjct: 1   MGRIFTVELEGRSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEE--MMEDLNGDAH 120
           LSGMH V DIFCC CGQ +GWKY + H+K QKYKEGKFVLER RIV+E  +  ++  D H
Sbjct: 61  LSGMHTVADIFCCCCGQNVGWKYESAHEKAQKYKEGKFVLERGRIVDEIDLSTEVYIDTH 120

Query: 121 PGSSDMEN 127
             +SD E+
Sbjct: 121 GSTSDTED 128

[Close]
BLAST of Csa1G075050 vs. TAIR10
Match: AT3G08990.1 (AT3G08990.1 Yippee family putative zinc-binding protein)

HSP 1 Score: 141.7 bits (356), Expect = 3.1e-34
Identity = 57/106 (53.77%), Postives = 81/106 (76.42%), Query Frame = 1 

Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGR+F+++LEG  Y C++C  + A+ +D++S++F+C  GRAYLF NVVN+T G KE R+M
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIV 107
           ++G H V DIFC  CG ++GWKY   +DK QKYKEGKF+LER++++
Sbjct: 61  ITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVL 106

[Close]
BLAST of Csa1G075050 vs. TAIR10
Match: AT3G11230.2 (AT3G11230.2 Yippee family putative zinc-binding protein)

HSP 1 Score: 137.1 bits (344), Expect = 7.5e-33
Identity = 60/105 (57.14%), Postives = 78/105 (74.29%), Query Frame = 1 

Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGR+FLV LEG+SY C+ C  N+AL DDV+S++F    G+AYLFS VVN+ +G KE+R+M
Sbjct: 34  MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMM 93

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRI 106
           ++GMH V DI+C  CG  +GWKY    +K QKYKEGK VLER+++
Sbjct: 94  MTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKV 138

[Close]
BLAST of Csa1G075050 vs. TAIR10
Match: AT2G40110.1 (AT2G40110.1 Yippee family putative zinc-binding protein)

HSP 1 Score: 136.7 bits (343), Expect = 9.8e-33
Identity = 58/105 (55.24%), Postives = 78/105 (74.29%), Query Frame = 1 

Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGR+F+V LEG+ Y C+ C  ++A  +D++S++F+C  G+AYLF+ V N++ G  EERLM
Sbjct: 1   MGRLFVVNLEGKIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEERLM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRI 106
           ++G H V DIFC  CG I+GWKY T H+K QKYKEGK VLER++I
Sbjct: 61  MTGKHTVADIFCVSCGSIVGWKYETAHEKNQKYKEGKSVLERFKI 105

[Close]
BLAST of Csa1G075050 vs. TAIR10
Match: AT3G55890.1 (AT3G55890.1 Yippee family putative zinc-binding protein)

HSP 1 Score: 132.5 bits (332), Expect = 1.9e-31
Identity = 57/105 (54.29%), Postives = 77/105 (73.33%), Query Frame = 1 

Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGRVF+V+LEG  Y C+ C  +++   D++S++F C  GRAYLF+NVVN++ G KE+R+M
Sbjct: 1   MGRVFMVDLEGNIYICKLCKTHLSTDQDIMSKSFQCKNGRAYLFNNVVNVSVGEKEDRMM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRI 106
           ++G+H V DIFC  CG  +GWKY   H+K QKYKEGK VLE ++I
Sbjct: 61  ITGLHNVVDIFCVGCGSNVGWKYEFAHEKSQKYKEGKSVLELYKI 105

[Close]
BLAST of Csa1G075050 vs. NCBI nr
Match: gi|449457755|ref|XP_004146613.1| (PREDICTED: protein yippee-like At5g53940 [Cucumis sativus])

HSP 1 Score: 270.0 bits (689), Expect = 2.1e-69
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1 

Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM
Sbjct: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120
           LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG
Sbjct: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120

Query: 121 SSDMENP 128
           SSDMENP
Sbjct: 121 SSDMENP 127

[Close]
BLAST of Csa1G075050 vs. NCBI nr
Match: gi|659068112|ref|XP_008442812.1| (PREDICTED: protein yippee-like At5g53940 [Cucumis melo])

HSP 1 Score: 269.6 bits (688), Expect = 2.8e-69
Identity = 126/127 (99.21%), Postives = 127/127 (100.00%), Query Frame = 1 

Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGR+FLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM
Sbjct: 1   MGRIFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120
           LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG
Sbjct: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120

Query: 121 SSDMENP 128
           SSDMENP
Sbjct: 121 SSDMENP 127

[Close]
BLAST of Csa1G075050 vs. NCBI nr
Match: gi|702318621|ref|XP_010052288.1| (PREDICTED: protein yippee-like At5g53940 isoform X1 [Eucalyptus grandis])

HSP 1 Score: 216.5 bits (550), Expect = 2.8e-53
Identity = 98/127 (77.17%), Postives = 113/127 (88.98%), Query Frame = 1 

Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGRVFLVEL GR+YRCRFCN+ +ALADDVLS++FNC QGRA+LF+ VVN+T G +EERLM
Sbjct: 1   MGRVFLVELGGRAYRCRFCNSPLALADDVLSKSFNCRQGRAFLFTKVVNVTVGGEEERLM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120
           L+GMH VED+FCC CGQILGWKYV  HDK QKYKEGKFVLERWRI+EE+ ED N +AHPG
Sbjct: 61  LTGMHTVEDVFCCCCGQILGWKYVAAHDKSQKYKEGKFVLERWRIMEEVTEDFNLEAHPG 120

Query: 121 SSDMENP 128
           SSD+ENP
Sbjct: 121 SSDVENP 127

[Close]
BLAST of Csa1G075050 vs. NCBI nr
Match: gi|802786340|ref|XP_012091651.1| (PREDICTED: protein yippee-like At5g53940 [Jatropha curcas])

HSP 1 Score: 210.7 bits (535), Expect = 1.5e-51
Identity = 96/126 (76.19%), Postives = 109/126 (86.51%), Query Frame = 1 

Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGR+FLV+L+GR YRCRFC+  +ALADDVLSRTFNC +GRAYLFSNVVN+T GP EER+M
Sbjct: 1   MGRIFLVDLDGRCYRCRFCDTPLALADDVLSRTFNCRKGRAYLFSNVVNVTVGPAEERMM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120
           LSG+H VEDIFCC CGQ+LGWKYV  HDK QKYKEGKFVLERWRI EE+ E+ N DA PG
Sbjct: 61  LSGIHTVEDIFCCCCGQLLGWKYVAAHDKGQKYKEGKFVLERWRIAEEVTEEFNLDARPG 120

Query: 121 SSDMEN 127
           SSD E+
Sbjct: 121 SSDGES 126

[Close]
BLAST of Csa1G075050 vs. NCBI nr
Match: gi|657959700|ref|XP_008371402.1| (PREDICTED: protein yippee-like At5g53940 isoform X1 [Malus domestica])

HSP 1 Score: 208.4 bits (529), Expect = 7.5e-51
Identity = 96/127 (75.59%), Postives = 111/127 (87.40%), Query Frame = 1 

Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGR+FL+EL+GR+YRCRFC++ +ALADDVLSR+FN  QGRAYLFSNVVNIT GP+E+RLM
Sbjct: 1   MGRIFLIELDGRTYRCRFCDSALALADDVLSRSFNSHQGRAYLFSNVVNITLGPEEDRLM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120
            SG+H VEDIFCC CGQILGWKYV  H+K QKYKEGKFVLERWRIVE++ E+ N DA  G
Sbjct: 61  YSGLHTVEDIFCCCCGQILGWKYVIAHEKNQKYKEGKFVLERWRIVEDVAEEFNLDARLG 120

Query: 121 SSDMENP 128
           SSD ENP
Sbjct: 121 SSDGENP 127

The following BLAST results are available for this feature:
BLAST of Csa1G075050 vs. Swiss-Prot
Match NameE-valueIdentityDescription
YIPL7_ARATH2.2e-4263.28Protein yippee-like At5g53940 OS=Arabidopsis thaliana GN=At5g53940 PE=2 SV=1[more]
YIPL1_ARATH5.4e-3353.77Protein yippee-like At3g08990 OS=Arabidopsis thaliana GN=At3g08990 PE=2 SV=2[more]
YIPL_SOLTU5.4e-3357.14Protein yippee-like OS=Solanum tuberosum PE=2 SV=1[more]
YIPL3_ARATH1.3e-3157.14Protein yippee-like At3g11230 OS=Arabidopsis thaliana GN=At3g11230 PE=2 SV=1[more]
YIPL4_ARATH3.3e-3054.29Protein yippee-like At3g55890 OS=Arabidopsis thaliana GN=At3g55890 PE=2 SV=1[more]
BLAST of Csa1G075050 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRZ0_CUCSA1.5e-69100.00Protein yippee-like OS=Cucumis sativus GN=Csa_1G075050 PE=3 SV=1[more]
A0A059CE49_EUCGR1.9e-5377.17Protein yippee-like OS=Eucalyptus grandis GN=EUGRSUZ_D00603 PE=3 SV=1[more]
W9SVT3_9ROSA9.9e-5073.02Protein yippee-like OS=Morus notabilis GN=L484_015073 PE=3 SV=1[more]
V4TQ69_9ROSI4.2e-4872.66Protein yippee-like OS=Citrus clementina GN=CICLE_v10017171mg PE=3 SV=1[more]
A0A067GQS3_CITSI4.2e-4872.66Protein yippee-like OS=Citrus sinensis GN=CISIN_1g032714mg PE=3 SV=1[more]
BLAST of Csa1G075050 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G53940.11.2e-4363.28 Yippee family putative zinc-binding protein[more]
AT3G08990.13.1e-3453.77 Yippee family putative zinc-binding protein[more]
AT3G11230.27.5e-3357.14 Yippee family putative zinc-binding protein[more]
AT2G40110.19.8e-3355.24 Yippee family putative zinc-binding protein[more]
AT3G55890.11.9e-3154.29 Yippee family putative zinc-binding protein[more]
BLAST of Csa1G075050 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449457755|ref|XP_004146613.1|2.1e-69100.00PREDICTED: protein yippee-like At5g53940 [Cucumis sativus][more]
gi|659068112|ref|XP_008442812.1|2.8e-6999.21PREDICTED: protein yippee-like At5g53940 [Cucumis melo][more]
gi|702318621|ref|XP_010052288.1|2.8e-5377.17PREDICTED: protein yippee-like At5g53940 isoform X1 [Eucalyptus grandis][more]
gi|802786340|ref|XP_012091651.1|1.5e-5176.19PREDICTED: protein yippee-like At5g53940 [Jatropha curcas][more]
gi|657959700|ref|XP_008371402.1|7.5e-5175.59PREDICTED: protein yippee-like At5g53940 isoform X1 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004910Yippee/Mis18/Cereblon
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0046872 metal ion binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU084451cucumber EST collection version 3.0transcribed_cluster
CU111156cucumber EST collection version 3.0transcribed_cluster
CU163684cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G075050.1Csa1G075050.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU163684CU163684transcribed_cluster
CU111156CU111156transcribed_cluster
CU084451CU084451transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004910Yippee/Mis18/CereblonPFAMPF03226Yippee-Mis18coord: 14..105
score: 6.3
NoneNo IPR availablePANTHERPTHR13848FAMILY NOT NAMEDcoord: 1..126
score: 1.8
NoneNo IPR availablePANTHERPTHR13848:SF13SUBFAMILY NOT NAMEDcoord: 1..126
score: 1.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G075050Cla023364Watermelon (97103) v1cuwmB075
Csa1G075050ClCG03G008050Watermelon (Charleston Gray)cuwcgB048
Csa1G075050ClCG11G017850Watermelon (Charleston Gray)cuwcgB009
Csa1G075050Lsi02G007750Bottle gourd (USVL1VR-Ls)culsiB022
Csa1G075050Cla97C11G223880Watermelon (97103) v2cuwmbB023
Csa1G075050Cla97C03G059340Watermelon (97103) v2cuwmbB044
Csa1G075050Bhi08G001866Wax gourdcuwgoB052
Csa1G075050Bhi09G002827Wax gourdcuwgoB073
Csa1G075050CSPI01G12320Wild cucumber (PI 183967)cpicuB000
Csa1G075050CSPI04G23270Wild cucumber (PI 183967)cpicuB171
Csa1G075050Cucsa.122940Cucumber (Gy14) v1cgycuB161
Csa1G075050Cucsa.126870Cucumber (Gy14) v1cgycuB170
Csa1G075050CmaCh18G003870Cucurbita maxima (Rimu)cmacuB391
Csa1G075050CmaCh09G008480Cucurbita maxima (Rimu)cmacuB010
Csa1G075050CmaCh13G006280Cucurbita maxima (Rimu)cmacuB218
Csa1G075050CmoCh01G012740Cucurbita moschata (Rifu)cmocuB419
Csa1G075050CmoCh18G003660Cucurbita moschata (Rifu)cmocuB380
Csa1G075050CmoCh13G006490Cucurbita moschata (Rifu)cmocuB203
Csa1G075050Cp4.1LG09g08190Cucurbita pepo (Zucchini)cpecuB029
Csa1G075050Cp4.1LG06g06780Cucurbita pepo (Zucchini)cpecuB770
Csa1G075050Cp4.1LG20g04480Cucurbita pepo (Zucchini)cpecuB506
Csa1G075050CsGy1G012350Cucumber (Gy14) v2cgybcuB001
Csa1G075050CsGy4G021640Cucumber (Gy14) v2cgybcuB158
Csa1G075050Carg21514Silver-seed gourdcarcuB0963
Csa1G075050Carg17082Silver-seed gourdcarcuB0186
Csa1G075050Carg14611Silver-seed gourdcarcuB0163
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Csa1G075050Csa4G630520Cucumber (Chinese Long) v2cucuB026
The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G075050Watermelon (97103) v2cuwmbB000
Csa1G075050Wax gourdcuwgoB023
Csa1G075050Cucumber (Chinese Long) v2cucuB035
Csa1G075050Cucumber (Gy14) v1cgycuB015
Csa1G075050Cucurbita maxima (Rimu)cmacuB648
Csa1G075050Cucurbita maxima (Rimu)cmacuB848
Csa1G075050Cucurbita moschata (Rifu)cmocuB000
Csa1G075050Cucurbita moschata (Rifu)cmocuB636
Csa1G075050Cucurbita moschata (Rifu)cmocuB836
Csa1G075050Melon (DHL92) v3.5.1cumeB027
Csa1G075050Melon (DHL92) v3.5.1cumeB083
Csa1G075050Watermelon (Charleston Gray)cuwcgB012
Csa1G075050Watermelon (97103) v1cuwmB023
Csa1G075050Watermelon (97103) v1cuwmB043
Csa1G075050Cucurbita pepo (Zucchini)cpecuB058
Csa1G075050Cucurbita pepo (Zucchini)cpecuB474
Csa1G075050Bottle gourd (USVL1VR-Ls)culsiB019
Csa1G075050Cucumber (Gy14) v2cgybcuB239
Csa1G075050Melon (DHL92) v3.6.1cumedB022
Csa1G075050Melon (DHL92) v3.6.1cumedB077
Csa1G075050Silver-seed gourdcarcuB0575
Csa1G075050Silver-seed gourdcarcuB0661