Csa1G074940 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G074940
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionF3H9.10 protein
LocationChr1 : 7665391 .. 7668640 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGACAACGATTCAGGTGATGGCGAAGTATCTTCAGCCCAAGCAGTTCTTCTCGGAGCTTTAGCTCCTGGGGTCAACGTTAGTTCAAATCAGTTTCCCTTTTGATTTTCCGTCTCCCTTTTTTCCCCTGCTAATCAATTCTTTCAATTGAATTCCCCTTTCTTTAATATTCTAAAATCAGGGTCCTACATGGACTACACTCAAGTCGGCGTTTTTGATGCTGGGACTGTGTCTTATCCTGATGCTTGCCCTTGCATTCTCTTCCAGTGATTCTTGGTTGATTCTTCATGTTACCTTCCTTGTGGTTATTACTGCTACCCTTTTCTTGCTACTTAACTGGTAAGTTGAAATTTTCGTTATTGAATTTTGTCTCCATTTCTGTCTCTTCTGTGTTTTATAAATCTGTATGTGGGGTTTCTTTTAAAGGTTAATTTAACATGTTTGGTCAATTTTGTGGCATTAATTATGTGGTTTGATCTTTAGGTTGTAACAATTTTGCCTTAAACTTGAGTAGATAACAACTTAGTCCGATTTGATCCTAATGAGAAAAACACTTTTAAGATTTTATGAAATTTCTTGAAGTTACGTCTATGATCTTCAATGGCTTAAATTGAACTAGATGTCAATCAATATGCTGTTTTCGATTCTCACAGAAGGATATAGACAACTATAGGCTATAGTGAATTGACCTTATTTTGGATTCCTTTGCTTGTCTAGTAGGTTCGAAATTTCATGTACTGGGCCTAAAATGCAATGAAAATATAGGATGATTAAGTACCTAGAAGTATTTGCTCTAAAGTGCTATGAAACTACCGACTAAGCTGAGTTAAAATATAGCTTTAGCTAGCTCTCAATTGCTTACTGATCTGAAATGGAAAACAGGCCGTGAACCTTTTGTTCTTTTATGAATCACCTAACCAATACTAACAACTGAAGATCAAGTGCTAGTCAATAAGTGTCTGCTGTTCAATTTTAATGCGGGCTGACTAACTAGGTAACGTGATTAACTTATCCATTGCTTTCTATCATGATGCATTGAGAATTGTGTGGAATACTAGTTCAGCATGATAGCCTGTTTCCGAATAATACTATCAATTATATAGAATACCTCCACGATGAGAGGCTGAGAATCTAGGTTTCAGTGGTATCTGTCAACAGAAAAGAAGGTTATGTTTATGTTAATGGCATAGGGTCTAAGGGCTAAATGTAGCAAGGGAAGTCTTGAAAATAATTCACTGTAGTCCCAAAAAAGAGTTTAAGACCAAATAACATTTTTTCTCCTCTTTTTTTAAATAAGAAACTGAACTTTCATTAAGAAACGTGAAATGGTATAGTGTTATACGAAGGTAAGAGGAGCCCCAACCTACAAAAGGACTTCCAGTCCAAAAGAATAATATTTAACTGATAATTACAAAAGGCCTTCGAGGCCACCACCCACTAGGAAGTATTATACCTAATAGCATATTAAATAACATTCAGCGAGCATCCAAATTCTTTGAGATTATGATGGTGATGCGTGAGAAAATTTGAAAGAAGCCAAAGACTGGGAGAACTTATTGAAATATGTTTTCTACAAGGTAGGGTGTATCAAATTAAAATTTGCAGTCTTAGGTTGTTGGAAAGCATTCATTAAGTTTATATGTATTATTTTTAGTTAATTAATTGTGAGGTTAGTGATTGAACCACTGACTTTCGAAATGGTAACCGGTGTCTCTTTATCCATTGAGCATGTTTGGATTGACTTATCAAGTTTATGTTATTGGAGAGACGGTAATTATTTGTGTCTTTTTGACTTGTGGAACAATTGCATGGGGTGTCAAATTGTTTTGATTCATTTCCTTGTTTGTCTAATTAGTGAGATTGATCTTTCTCGGACCTCTCTGTATTTCCTTAGCATTTACAGTTTAGTTACATGGTTTTAGCCTTTTATCCCATAATAATTGATTGTTAAATTAATTAAAGTTGGACGGTTGCATTCGTGATATTTAAGTGAACTAGATCACAAATCATTTGGATGGGGCTTTCACACTCATTATCTATATTAAAACATGACTTCGTATACTCTCAGTAAACAATTTTTACTTCATTGAGTTTGTTTTTAGGCATATAATTGCCTCCATGTGTTTGATTTGGGTTTTTTTAGAAGGGAAAAATTTTCATTGGTGAATGAAATAAAGGAATAAAATCTCCACCTAAAGGTGAGATTAGATAAGATTTTTTCAATGAGAAACCAAATAAGAAAGGCCGTAATCAGAAGAAAAAAAATGCTGATTACGTTGACATCAATACAACTCAAAAGACAAATCAAATTCAAGAAACTATTAAAGGAGGAAAAAAAATCCTGGAAGTATCAATCATTCCTCTCTAACAGAAAGCCAATAAAATGCTGTGATTAAAAGCAAGCCGTAGAGTCTTCTTTTCACCATCGGAGGGATGACCATCAAAGATATAATAAAAAGATTCACCGGGAGAGTCTAGAGAAGCCGAAGATCAACCAAATAATCTCTGCTTCAAGGCATTGTATTATTTAACAACACATATAGTTGATATTCGTGTATAATTAATCTCTTTTTGGCAATTCTCAAAGAAATTACAATTTTTTAACATGTTTTTTTTGTATGTTTTATTCTCCTGTTTTCTTGAACAATGCCAGCATGTTTATGTTGCATTGCATTTGAGTCATCTGTACCTCCTGCTACTGGTCCTCCTTGGCCTACATAGGTTTTGAGTATGACATTGATAGTTTGATCGTATGCATTTGCAATTTACGAATTTACACATGCTGGATCAAATGTGAACCATCTCATGTTTGTGCATATAAATAAATTGTTTTGAGTTCTTTACAGGTTTCTTTCTCAGACTGGCCTGGTTTCAGTGAAGAATCAAATGGAAGAACTGCAGTTGGCGCCAAAGAGTCAAGATAAAAGCGAGAAGAATGAATGATGGTTACTACTGCTATAGCATTATAAACCAAGACATAAAATTGGATGATAGTAACAGAAACTACATTACAGCCTCGAGTAGAAACACGAGGTGATAAGCTTTATAAATCAATCGGGTACAATAGCATCTTTTCTTTATTTGAAGAGAGGAAAAAAGGAAACTTAATTTCAGAAGAAACACTTGGAATGGTAACTTCATTCATTCTTTGATTGCTCCTCCTTGTGTTTTCCCTTTTTCTGCTTAATGTAACAGAAGCAGGAACAGCATGGTAACTGTAAAAAGAACTTCATGTCTTCTTTCGTTT

mRNA sequence

ATGGCAGACAACGATTCAGGTGATGGCGAAGTATCTTCAGCCCAAGCAGTTCTTCTCGGAGCTTTAGCTCCTGGGGTCAACGGTCCTACATGGACTACACTCAAGTCGGCGTTTTTGATGCTGGGACTGTGTCTTATCCTGATGCTTGCCCTTGCATTCTCTTCCAGTGATTCTTGGTTGATTCTTCATGTTACCTTCCTTGTGGTTATTACTGCTACCCTTTTCTTGCTACTTAACTGGTTTCTTTCTCAGACTGGCCTGGTTTCAGTGAAGAATCAAATGGAAGAACTGCAGTTGGCGCCAAAGAGTCAAGATAAAAGCGAGAAGAATGAATGA

Coding sequence (CDS)

ATGGCAGACAACGATTCAGGTGATGGCGAAGTATCTTCAGCCCAAGCAGTTCTTCTCGGAGCTTTAGCTCCTGGGGTCAACGGTCCTACATGGACTACACTCAAGTCGGCGTTTTTGATGCTGGGACTGTGTCTTATCCTGATGCTTGCCCTTGCATTCTCTTCCAGTGATTCTTGGTTGATTCTTCATGTTACCTTCCTTGTGGTTATTACTGCTACCCTTTTCTTGCTACTTAACTGGTTTCTTTCTCAGACTGGCCTGGTTTCAGTGAAGAATCAAATGGAAGAACTGCAGTTGGCGCCAAAGAGTCAAGATAAAAGCGAGAAGAATGAATGA

Protein sequence

MADNDSGDGEVSSAQAVLLGALAPGVNGPTWTTLKSAFLMLGLCLILMLALAFSSSDSWLILHVTFLVVITATLFLLLNWFLSQTGLVSVKNQMEELQLAPKSQDKSEKNE*
Homology
[Close]
BLAST of Csa1G074940 vs. TrEMBL
Match: A0A0A0LUL6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G074940 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 7.6e-54
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1 

Query: 1   MADNDSGDGEVSSAQAVLLGALAPGVNGPTWTTLKSAFLMLGLCLILMLALAFSSSDSWL 60
           MADNDSGDGEVSSAQAVLLGALAPGVNGPTWTTLKSAFLMLGLCLILMLALAFSSSDSWL
Sbjct: 1   MADNDSGDGEVSSAQAVLLGALAPGVNGPTWTTLKSAFLMLGLCLILMLALAFSSSDSWL 60

Query: 61  ILHVTFLVVITATLFLLLNWFLSQTGLVSVKNQMEELQLAPKSQDKSEKNE 112
           ILHVTFLVVITATLFLLLNWFLSQTGLVSVKNQMEELQLAPKSQDKSEKNE
Sbjct: 61  ILHVTFLVVITATLFLLLNWFLSQTGLVSVKNQMEELQLAPKSQDKSEKNE 111

[Close]
BLAST of Csa1G074940 vs. TrEMBL
Match: A0A0D2UFC8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G155100 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.9e-34
Identity = 76/106 (71.70%), Postives = 87/106 (82.08%), Query Frame = 1 

Query: 1   MADNDSGDGEVSSAQAVLLGALAPGVNGPTWTTLKSAFLMLGLCLILMLALAFSSSDSWL 60
           M    S  G++SSAQAVLLGALAPGVNGPTW+TLK  FLMLGLCL LML LAFSS+DS L
Sbjct: 1   MEKEQSAGGDISSAQAVLLGALAPGVNGPTWSTLKLTFLMLGLCLALMLGLAFSSTDSSL 60

Query: 61  ILHVTFLVVITATLFLLLNWFLSQTGLVSVKNQMEELQLAPKSQDK 107
           ILHVTFLV+I  TLFLLLNWFL QTGLVSV+ QM+E+ L P ++ +
Sbjct: 61  ILHVTFLVLIAITLFLLLNWFLEQTGLVSVERQMQEMDLIPNNRKR 106

[Close]
BLAST of Csa1G074940 vs. TrEMBL
Match: B9H2T4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s04520g PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.9e-34
Identity = 74/100 (74.00%), Postives = 87/100 (87.00%), Query Frame = 1 

Query: 10  EVSSAQAVLLGALAPGVNGPTWTTLKSAFLMLGLCLILMLALAFSSSDSWLILHVTFLVV 69
           ++SSAQAVLLGALAPGVNGPTW TLKSAFL+LGLCL +ML LAFSSSDS L++HV FLV 
Sbjct: 8   DISSAQAVLLGALAPGVNGPTWNTLKSAFLLLGLCLAMMLVLAFSSSDSSLVIHVGFLVT 67

Query: 70  ITATLFLLLNWFLSQTGLVSVKNQMEELQLAPKSQDKSEK 110
           ITATLFLLL+WFLSQTGLVS+++QM E+ L P+ Q   +K
Sbjct: 68  ITATLFLLLSWFLSQTGLVSIEHQMREMDLVPEDQGAKQK 107

[Close]
BLAST of Csa1G074940 vs. TrEMBL
Match: A0A0D2UD22_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G155100 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 6.7e-34
Identity = 76/103 (73.79%), Postives = 85/103 (82.52%), Query Frame = 1 

Query: 1   MADNDSGDGEVSSAQAVLLGALAPGVNGPTWTTLKSAFLMLGLCLILMLALAFSSSDSWL 60
           M    S  G++SSAQAVLLGALAPGVNGPTW+TLK  FLMLGLCL LML LAFSS+DS L
Sbjct: 1   MEKEQSAGGDISSAQAVLLGALAPGVNGPTWSTLKLTFLMLGLCLALMLGLAFSSTDSSL 60

Query: 61  ILHVTFLVVITATLFLLLNWFLSQTGLVSVKNQMEELQLAPKS 104
           ILHVTFLV+I  TLFLLLNWFL QTGLVSV+ QM+E+ L P +
Sbjct: 61  ILHVTFLVLIAITLFLLLNWFLEQTGLVSVERQMQEMDLIPNN 103

[Close]
BLAST of Csa1G074940 vs. TrEMBL
Match: M5WI80_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013498mg PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 8.7e-34
Identity = 74/109 (67.89%), Postives = 90/109 (82.57%), Query Frame = 1 

Query: 1   MADNDSGDGEVSSAQAVLLGALAPGVNGPTWTTLKSAFLMLGLCLILMLALAFSSSDSWL 60
           MA   S   ++SSA AV LGALAPGVN PTWTTL+ AF+MLGLCL +ML LAFSSSDSWL
Sbjct: 1   MAKKQSEGEQISSANAVFLGALAPGVNAPTWTTLRFAFVMLGLCLAVMLGLAFSSSDSWL 60

Query: 61  ILHVTFLVVITATLFLLLNWFLSQTGLVSVKNQMEELQLAPKSQDKSEK 110
           +LHV FLV+IT TLFLLL+WFL+QTGLVSV++Q+ E+ LAP  Q+ S++
Sbjct: 61  VLHVAFLVLITMTLFLLLSWFLAQTGLVSVEHQIREMGLAPNDQEVSKE 109

[Close]
BLAST of Csa1G074940 vs. TAIR10
Match: AT1G28250.1 (AT1G28250.1 unknown protein)

HSP 1 Score: 133.3 bits (334), Expect = 9.5e-32
Identity = 62/97 (63.92%), Postives = 77/97 (79.38%), Query Frame = 1 

Query: 10  EVSSAQAVLLGALAPGVNGPTWTTLKSAFLMLGLCLILMLALAFSSSDSWLILHVTFLVV 69
           ++SS +AV LGALAPGVNGPTW TL+ AFL+LGLCL  ML++AF+S  S L++HV FL+V
Sbjct: 6   QISSTEAVFLGALAPGVNGPTWNTLRFAFLLLGLCLAFMLSVAFTSGQSMLLVHVGFLIV 65

Query: 70  ITATLFLLLNWFLSQTGLVSVKNQMEELQLAPKSQDK 107
           I +TLF+LLNWFL+QTGLV V+ QM+EL L P  + K
Sbjct: 66  IASTLFILLNWFLAQTGLVQVETQMQELNLLPNDKTK 102

[Close]
BLAST of Csa1G074940 vs. NCBI nr
Match: gi|449457745|ref|XP_004146608.1| (PREDICTED: uncharacterized protein LOC101210942 [Cucumis sativus])

HSP 1 Score: 217.6 bits (553), Expect = 1.1e-53
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1 

Query: 1   MADNDSGDGEVSSAQAVLLGALAPGVNGPTWTTLKSAFLMLGLCLILMLALAFSSSDSWL 60
           MADNDSGDGEVSSAQAVLLGALAPGVNGPTWTTLKSAFLMLGLCLILMLALAFSSSDSWL
Sbjct: 1   MADNDSGDGEVSSAQAVLLGALAPGVNGPTWTTLKSAFLMLGLCLILMLALAFSSSDSWL 60

Query: 61  ILHVTFLVVITATLFLLLNWFLSQTGLVSVKNQMEELQLAPKSQDKSEKNE 112
           ILHVTFLVVITATLFLLLNWFLSQTGLVSVKNQMEELQLAPKSQDKSEKNE
Sbjct: 61  ILHVTFLVVITATLFLLLNWFLSQTGLVSVKNQMEELQLAPKSQDKSEKNE 111

[Close]
BLAST of Csa1G074940 vs. NCBI nr
Match: gi|659068092|ref|XP_008442704.1| (PREDICTED: uncharacterized protein LOC103486495 [Cucumis melo])

HSP 1 Score: 214.5 bits (545), Expect = 9.2e-53
Identity = 108/111 (97.30%), Postives = 111/111 (100.00%), Query Frame = 1 

Query: 1   MADNDSGDGEVSSAQAVLLGALAPGVNGPTWTTLKSAFLMLGLCLILMLALAFSSSDSWL 60
           MADNDSGDGEVSSAQAVLLGALAPGVNGPTWTTLKSAFLMLGLCL+LMLALAFSSSDSWL
Sbjct: 1   MADNDSGDGEVSSAQAVLLGALAPGVNGPTWTTLKSAFLMLGLCLVLMLALAFSSSDSWL 60

Query: 61  ILHVTFLVVITATLFLLLNWFLSQTGLVSVKNQMEELQLAPKSQDKSEKNE 112
           ILHVTFLVVIT+TLFLLLNWFLSQTGLVSVKNQMEELQLAPKS+DKSEKNE
Sbjct: 61  ILHVTFLVVITSTLFLLLNWFLSQTGLVSVKNQMEELQLAPKSRDKSEKNE 111

[Close]
BLAST of Csa1G074940 vs. NCBI nr
Match: gi|470115653|ref|XP_004294009.1| (PREDICTED: uncharacterized protein LOC101291317 [Fragaria vesca subsp. vesca])

HSP 1 Score: 156.4 bits (394), Expect = 3.0e-35
Identity = 78/108 (72.22%), Postives = 90/108 (83.33%), Query Frame = 1 

Query: 4   NDSGDGE-VSSAQAVLLGALAPGVNGPTWTTLKSAFLMLGLCLILMLALAFSSSDSWLIL 63
           +  G GE +SSAQAV LGALAPGVNGPTW TL+ AF+MLG+CL +ML LAFSSSDSWL+L
Sbjct: 6   SQGGGGENISSAQAVFLGALAPGVNGPTWKTLRLAFVMLGVCLAVMLGLAFSSSDSWLVL 65

Query: 64  HVTFLVVITATLFLLLNWFLSQTGLVSVKNQMEELQLAPKSQDKSEKN 111
           HV FLV+IT TLFLLL+WFLSQTGLVSV +Q+ E+ LAP  QD S KN
Sbjct: 66  HVAFLVLITTTLFLLLSWFLSQTGLVSVDHQIREIGLAPNDQDTSRKN 113

[Close]
BLAST of Csa1G074940 vs. NCBI nr
Match: gi|224079193|ref|XP_002305788.1| (hypothetical protein POPTR_0004s04520g [Populus trichocarpa])

HSP 1 Score: 152.1 bits (383), Expect = 5.6e-34
Identity = 74/100 (74.00%), Postives = 87/100 (87.00%), Query Frame = 1 

Query: 10  EVSSAQAVLLGALAPGVNGPTWTTLKSAFLMLGLCLILMLALAFSSSDSWLILHVTFLVV 69
           ++SSAQAVLLGALAPGVNGPTW TLKSAFL+LGLCL +ML LAFSSSDS L++HV FLV 
Sbjct: 8   DISSAQAVLLGALAPGVNGPTWNTLKSAFLLLGLCLAMMLVLAFSSSDSSLVIHVGFLVT 67

Query: 70  ITATLFLLLNWFLSQTGLVSVKNQMEELQLAPKSQDKSEK 110
           ITATLFLLL+WFLSQTGLVS+++QM E+ L P+ Q   +K
Sbjct: 68  ITATLFLLLSWFLSQTGLVSIEHQMREMDLVPEDQGAKQK 107

[Close]
BLAST of Csa1G074940 vs. NCBI nr
Match: gi|763799776|gb|KJB66731.1| (hypothetical protein B456_010G155100 [Gossypium raimondii])

HSP 1 Score: 152.1 bits (383), Expect = 5.6e-34
Identity = 76/106 (71.70%), Postives = 87/106 (82.08%), Query Frame = 1 

Query: 1   MADNDSGDGEVSSAQAVLLGALAPGVNGPTWTTLKSAFLMLGLCLILMLALAFSSSDSWL 60
           M    S  G++SSAQAVLLGALAPGVNGPTW+TLK  FLMLGLCL LML LAFSS+DS L
Sbjct: 1   MEKEQSAGGDISSAQAVLLGALAPGVNGPTWSTLKLTFLMLGLCLALMLGLAFSSTDSSL 60

Query: 61  ILHVTFLVVITATLFLLLNWFLSQTGLVSVKNQMEELQLAPKSQDK 107
           ILHVTFLV+I  TLFLLLNWFL QTGLVSV+ QM+E+ L P ++ +
Sbjct: 61  ILHVTFLVLIAITLFLLLNWFLEQTGLVSVERQMQEMDLIPNNRKR 106

The following BLAST results are available for this feature:
BLAST of Csa1G074940 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUL6_CUCSA7.6e-54100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G074940 PE=4 SV=1[more]
A0A0D2UFC8_GOSRA3.9e-3471.70Uncharacterized protein OS=Gossypium raimondii GN=B456_010G155100 PE=4 SV=1[more]
B9H2T4_POPTR3.9e-3474.00Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s04520g PE=4 SV=1[more]
A0A0D2UD22_GOSRA6.7e-3473.79Uncharacterized protein OS=Gossypium raimondii GN=B456_010G155100 PE=4 SV=1[more]
M5WI80_PRUPE8.7e-3467.89Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013498mg PE=4 SV=1[more]
BLAST of Csa1G074940 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G28250.19.5e-3263.92 unknown protein[more]
BLAST of Csa1G074940 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449457745|ref|XP_004146608.1|1.1e-53100.00PREDICTED: uncharacterized protein LOC101210942 [Cucumis sativus][more]
gi|659068092|ref|XP_008442704.1|9.2e-5397.30PREDICTED: uncharacterized protein LOC103486495 [Cucumis melo][more]
gi|470115653|ref|XP_004294009.1|3.0e-3572.22PREDICTED: uncharacterized protein LOC101291317 [Fragaria vesca subsp. vesca][more]
gi|224079193|ref|XP_002305788.1|5.6e-3474.00hypothetical protein POPTR_0004s04520g [Populus trichocarpa][more]
gi|763799776|gb|KJB66731.1|5.6e-3471.70hypothetical protein B456_010G155100 [Gossypium raimondii][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0015824 proline transport
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU110308cucumber EST collection version 3.0transcribed_cluster
CU110536cucumber EST collection version 3.0transcribed_cluster
CU135104cucumber EST collection version 3.0transcribed_cluster
CU142951cucumber EST collection version 3.0transcribed_cluster
CU174558cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G074940.1Csa1G074940.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU142951CU142951transcribed_cluster
CU110536CU110536transcribed_cluster
CU174558CU174558transcribed_cluster
CU110308CU110308transcribed_cluster
CU135104CU135104transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G074940Cla019709Watermelon (97103) v1cuwmB023
Csa1G074940ClCG03G008150Watermelon (Charleston Gray)cuwcgB048
Csa1G074940Lsi02G007630Bottle gourd (USVL1VR-Ls)culsiB022
Csa1G074940MELO3C002614.2Melon (DHL92) v3.6.1cumedB022
Csa1G074940Cla97C03G059450Watermelon (97103) v2cuwmbB044
Csa1G074940BhiUN316G21Wax gourdcuwgoB027
Csa1G074940CSPI01G12210Wild cucumber (PI 183967)cpicuB000
Csa1G074940Cucsa.126780Cucumber (Gy14) v1cgycuB170
Csa1G074940CmaCh18G003780Cucurbita maxima (Rimu)cmacuB391
Csa1G074940Cp4.1LG09g08340Cucurbita pepo (Zucchini)cpecuB029
Csa1G074940CsGy1G012230Cucumber (Gy14) v2cgybcuB001
Csa1G074940Carg14620Silver-seed gourdcarcuB0163
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G074940Cucurbita moschata (Rifu)cmocuB000
Csa1G074940Cucurbita moschata (Rifu)cmocuB203
Csa1G074940Cucurbita moschata (Rifu)cmocuB380
Csa1G074940Cucurbita moschata (Rifu)cmocuB419
Csa1G074940Cucurbita moschata (Rifu)cmocuB636
Csa1G074940Cucurbita moschata (Rifu)cmocuB836
Csa1G074940Melon (DHL92) v3.5.1cumeB027
Csa1G074940Melon (DHL92) v3.5.1cumeB083
Csa1G074940Watermelon (Charleston Gray)cuwcgB009
Csa1G074940Watermelon (Charleston Gray)cuwcgB012
Csa1G074940Watermelon (97103) v1cuwmB043
Csa1G074940Watermelon (97103) v1cuwmB075
Csa1G074940Cucurbita pepo (Zucchini)cpecuB058
Csa1G074940Cucurbita pepo (Zucchini)cpecuB474
Csa1G074940Cucurbita pepo (Zucchini)cpecuB506
Csa1G074940Cucurbita pepo (Zucchini)cpecuB770
Csa1G074940Bottle gourd (USVL1VR-Ls)culsiB019
Csa1G074940Cucumber (Gy14) v2cgybcuB158
Csa1G074940Cucumber (Gy14) v2cgybcuB239
Csa1G074940Melon (DHL92) v3.6.1cumedB077
Csa1G074940Silver-seed gourdcarcuB0186
Csa1G074940Silver-seed gourdcarcuB0575
Csa1G074940Silver-seed gourdcarcuB0661
Csa1G074940Silver-seed gourdcarcuB0963
Csa1G074940Watermelon (97103) v2cuwmbB000
Csa1G074940Watermelon (97103) v2cuwmbB023
Csa1G074940Wax gourdcuwgoB023
Csa1G074940Wax gourdcuwgoB073
Csa1G074940Cucumber (Chinese Long) v2cucuB026
Csa1G074940Cucumber (Chinese Long) v2cucuB035
Csa1G074940Cucumber (Chinese Long) v2cucuB045
Csa1G074940Cucumber (Gy14) v1cgycuB015
Csa1G074940Cucumber (Gy14) v1cgycuB161
Csa1G074940Cucurbita maxima (Rimu)cmacuB010
Csa1G074940Cucurbita maxima (Rimu)cmacuB218
Csa1G074940Cucurbita maxima (Rimu)cmacuB648
Csa1G074940Cucurbita maxima (Rimu)cmacuB848