Csa1G064810 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAGGTATAGTATAAGATTTGTAAATATGCGGAGTTTTGTGGTGTTTTTAGTTTCCTCCTTAGTTTCCCTATCCATGGCCATGGAAGCTCCCACGAATATTTTGATACACCCTTCCCTTTCTGCACCAATTTCACCTTCTCACCAAACTCTACTTACCTCTCTTCACCTCCTAAATGCTTCCGCCTTTGATCCTCCAACTCCAAATACTTTTCCTCCACCTCCTCTGGATGCGCCTCCTCCAGCTCAATCTTCGACGAAATCGAACCCATCTCCCTCACCTTCTTCCTCGCTCTCCTCTCCTTCCACGCCACTACCACCCCCTACCTCGCGTCGTTCACCAATTTCAGGTTATATAACTCATTTCTTCTCAAATTTAAGTGCTCCTAATCTTTTAGGTTTATATTTATTTTCTTACGCACGGATCTTGCTCAGCCAGTTACCCGACCAAAATTAAACTTATTTCATTATATATATTTTGTTGAACAGTGGGAAACAGATCCGCACCAGTGCAAATTGTGGCGATTGTGATTGCAACTACAATTATTTTCATAGGTGCACTTGTTGGGGGATTTTGTTACCTACGCCGACGAGTGTTACAAAATCCCGTATATTAGCTTCTGGATTTCTCCTCTTCTTTTACTCTTTTTGTATTCGTAAAAATATAGCGACTCATTTTTTTTTTTTTGGTTTTCCCTTTTCCTTAAATATCAAATCTTTAATAATAACTCCATTTTCATTTCTCTTCTGTACTTCTGTTCCCTTTCTTGTCAAAGTCTGTAATGCCTATATATATTTTGTATATCTTCCATTGGCTAATACATAGTGAAATATATTACTTTCTGCCTTCTGTTAAACTGAATGACAAAAATTTTGGACTATGGAGAGACATGGTTCTTGCTGTTCTTCGAGGTCAAAAGGTCGATGGATATGTTCTTGGCACAAAAACTCAACCACCTTAGTCCTTAAAGTCTAATGGTGAAGTTGGTTCTTCTACTTCAATTATTAATCCAACCTTTTAAGAATGGACAACAACAAACTAAGCTCTCCTTGGATGGTTACTTGGTTCGATGACCCTAGCCGCTTGTGGCATCAGAGGTCGTTAATCTGATAATGTCAAGAGAGTTATGGTTGGCCTTAGAGGAACTCTATGGTGCAACTAGCAAGAGTCCATATAAATCAATTGGGATAATCCTTCAAAATACTAGAAAAGGAACAATGAGAATGACAGAATATCTATCCATGATGAAACAAACATTGGAAAATATGCAACTAGCAGGATCACCAATTTCTCATGAAGATTTATTCTCTTATGTCTTAGTAGGCCTTGACGTCGAATATATTCCAATTGTGTGTGATATAGAAGGTAAGAACTCTCCAACCTGGCATGATGTTTAA ATGAAAAGGTATAGTATAAGATTTGTAAATATGCGGAGTTTTGTGGTGTTTTTAGTTTCCTCCTTAGTTTCCCTATCCATGGCCATGGAAGCTCCCACGAATATTTTGATACACCCTTCCCTTTCTGCACCAATTTCACCTTCTCACCAAACTCTACTTACCTCTCTTCACCTCCTAAATGCTTCCGCCTTTGATCCTCCAACTCCAAATACTTTTCCTCCACCTCCTCTGGATGCGCCTCCTCCAGCTCAATCTTCGACGAAATCGAACCCATCTCCCTCACCTTCTTCCTCGCTCTCCTCTCCTTCCACGCCACTACCACCCCCTACCTCGCGTCGTTCACCAATTTCAGTGGGAAACAGATCCGCACCAGTGCAAATTGTGGCGATTGTGATTGCAACTACAATTATTTTCATAGGTGCACTTGTTGGGGGATTTTGTTACCTACGCCGACGAGTGTTACAAAATCCCCCGCTTGTGGCATCAGAGGTCGTTAATCTGATAATGTCAAGAGAGTTATGGTTGGCCTTAGAGGAACTCTATGGTGCAACTAGCAAGAGTCCATATAAATCAATTGGGATAATCCTTCAAAATACTAGAAAAGGAACAATGAGAATGACAGAATATCTATCCATGATGAAACAAACATTGGAAAATATGCAACTAGCAGGATCACCAATTTCTCATGAAGATTTATTCTCTTATGTCTTAGTAGGCCTTGACGTCGAATATATTCCAATTGTGTGTGATATAGAAGGTAAGAACTCTCCAACCTGGCATGATGTTTAA ATGAAAAGGTATAGTATAAGATTTGTAAATATGCGGAGTTTTGTGGTGTTTTTAGTTTCCTCCTTAGTTTCCCTATCCATGGCCATGGAAGCTCCCACGAATATTTTGATACACCCTTCCCTTTCTGCACCAATTTCACCTTCTCACCAAACTCTACTTACCTCTCTTCACCTCCTAAATGCTTCCGCCTTTGATCCTCCAACTCCAAATACTTTTCCTCCACCTCCTCTGGATGCGCCTCCTCCAGCTCAATCTTCGACGAAATCGAACCCATCTCCCTCACCTTCTTCCTCGCTCTCCTCTCCTTCCACGCCACTACCACCCCCTACCTCGCGTCGTTCACCAATTTCAGTGGGAAACAGATCCGCACCAGTGCAAATTGTGGCGATTGTGATTGCAACTACAATTATTTTCATAGGTGCACTTGTTGGGGGATTTTGTTACCTACGCCGACGAGTGTTACAAAATCCCCCGCTTGTGGCATCAGAGGTCGTTAATCTGATAATGTCAAGAGAGTTATGGTTGGCCTTAGAGGAACTCTATGGTGCAACTAGCAAGAGTCCATATAAATCAATTGGGATAATCCTTCAAAATACTAGAAAAGGAACAATGAGAATGACAGAATATCTATCCATGATGAAACAAACATTGGAAAATATGCAACTAGCAGGATCACCAATTTCTCATGAAGATTTATTCTCTTATGTCTTAGTAGGCCTTGACGTCGAATATATTCCAATTGTGTGTGATATAGAAGGTAAGAACTCTCCAACCTGGCATGATGTTTAA MKRYSIRFVNMRSFVVFLVSSLVSLSMAMEAPTNILIHPSLSAPISPSHQTLLTSLHLLNASAFDPPTPNTFPPPPLDAPPPAQSSTKSNPSPSPSSSLSSPSTPLPPPTSRRSPISVGNRSAPVQIVAIVIATTIIFIGALVGGFCYLRRRVLQNPPLVASEVVNLIMSRELWLALEELYGATSKSPYKSIGIILQNTRKGTMRMTEYLSMMKQTLENMQLAGSPISHEDLFSYVLVGLDVEYIPIVCDIEGKNSPTWHDV*
BLAST of Csa1G064810 vs. TrEMBL
Match: A0A0A0LUB0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G064810 PE=4 SV=1) HSP 1 Score: 518.8 bits (1335), Expect = 3.7e-144 Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 1
BLAST of Csa1G064810 vs. TrEMBL
Match: I2F8W6_ANHV1 (Protein ORF6A OS=Anguillid herpesvirus 1 (isolate Anguilla anguilla/Netherlands/500138/1998) GN=AngHV1_ORF6A_1 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 6.2e-06 Identity = 37/81 (45.68%), Postives = 46/81 (56.79%), Query Frame = 1
BLAST of Csa1G064810 vs. TAIR10
Match: AT4G18670.1 (AT4G18670.1 Leucine-rich repeat (LRR) family protein) HSP 1 Score: 52.8 bits (125), Expect = 3.8e-07 Identity = 29/85 (34.12%), Postives = 39/85 (45.88%), Query Frame = 1
BLAST of Csa1G064810 vs. TAIR10
Match: AT1G35230.1 (AT1G35230.1 arabinogalactan protein 5) HSP 1 Score: 51.6 bits (122), Expect = 8.5e-07 Identity = 42/125 (33.60%), Postives = 61/125 (48.80%), Query Frame = 1
BLAST of Csa1G064810 vs. TAIR10
Match: AT3G19430.1 (AT3G19430.1 late embryogenesis abundant protein-related / LEA protein-related) HSP 1 Score: 48.5 bits (114), Expect = 7.2e-06 Identity = 31/88 (35.23%), Postives = 42/88 (47.73%), Query Frame = 1
HSP 2 Score: 45.4 bits (106), Expect = 6.1e-05 Identity = 31/89 (34.83%), Postives = 40/89 (44.94%), Query Frame = 1
HSP 3 Score: 40.4 bits (93), Expect = 2.0e-03 Identity = 22/59 (37.29%), Postives = 31/59 (52.54%), Query Frame = 1
HSP 4 Score: 36.2 bits (82), Expect = 3.7e-02 Identity = 31/92 (33.70%), Postives = 36/92 (39.13%), Query Frame = 1
BLAST of Csa1G064810 vs. NCBI nr
Match: gi|700209463|gb|KGN64559.1| (hypothetical protein Csa_1G064810 [Cucumis sativus]) HSP 1 Score: 518.8 bits (1335), Expect = 5.4e-144 Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 1
BLAST of Csa1G064810 vs. NCBI nr
Match: gi|264683614|gb|ACY72569.1| (unknown [Oryza sativa Japonica Group]) HSP 1 Score: 68.9 bits (167), Expect = 1.5e-08 Identity = 32/98 (32.65%), Postives = 56/98 (57.14%), Query Frame = 1
BLAST of Csa1G064810 vs. NCBI nr
Match: gi|947073248|gb|KRH22139.1| (hypothetical protein GLYMA_13G2801002, partial [Glycine max]) HSP 1 Score: 67.4 bits (163), Expect = 4.3e-08 Identity = 36/98 (36.73%), Postives = 54/98 (55.10%), Query Frame = 1
BLAST of Csa1G064810 vs. NCBI nr
Match: gi|571571805|ref|XP_006606948.1| (PREDICTED: uncharacterized protein LOC102661023 [Glycine max]) HSP 1 Score: 64.3 bits (155), Expect = 3.6e-07 Identity = 35/98 (35.71%), Postives = 53/98 (54.08%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |