Csa1G063540 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G063540
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPolyadenylate-binding protein; contains IPR012677 (Nucleotide-binding, alpha-beta plait)
LocationChr1 : 6702611 .. 6703998 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCCTGCACCTGGTGTTGCCCCTCACAACATGCCTCACCAGGCCCCTCAGTACCAACAACAGCAACCTCCTTACATGATGATGCCCCCTCAGCCGCCCCAACCTCAGCCTGTTCCTCAGATGTGGCCTCAGCAGCCACAGGCCGGTTCCCCACAGGGCCAACCCCCTCAGTCTGCCAACGGGGATGAGGTTCGTACCCTCTGGATCGGAGACTTGCAGTACTGGATGGACGAGAACTATATCTTTAATTGTTTTGCTCATACTGGCGAGGTACGTCTAAGAACGCCACCCACTTTAGATCTTGTGTGTGTGTGTCTTTATTATTTCTTTTTATCGTTGTTGTTGGGAAAAAAAAGATCTAGTTTTGTGATTATTAGGTTGATTGCATAAAGATTTGTCTACACACATGTTGGTATATATGAAGCGGTTCCGAAATTTCGTTTTTTTTTTTGCTGTTGAGATTTAACATTGTTTGTCTCTCCAGGTTTCCTCTGTGAAAGTGATTCGGAACAAGCAAACCGGCCAGTCCGAGGGTTACGGTTTTATTGAGTTTTTAACTCGTCCAGCTGCAGAAAGAGTACTTCAAACTTATAATGGCACCGCCATGCCCAATGGGGCACAAAATTTTAGATTGAACTGGGCATCAGCAGGGGAGAAGCGACAAGATGACTCTCCTGATTACACTATTTTTGTGGGAGATTTGGCTGGTGATGTTACTGATTATGTGCTACAAGAAACATTTAGGGCACGCTATAACTCAGTTAAGGGCGCTAAAGTTGTGATTGATAGGCTCACTGGACGCACTAAGGGTTATGGATTTGTTAAGTTTGGGGACGAGTCTGAACAAATGCGAGCAATGACTGAGATGAACGGTGTTCACTGTTCATCCAGACCCATGCGAATCGGACCAGCAGCTAACAAGAACACTTCTGGCGGTCAGCAGTTCTCGAAAAGTAAATACGAATTCCTCCCCAAACTGGAACATTTTAAATGAAAGACAGGGCATCAAATTTTGTATGGAATAGCTTGTCCATCATTCATTCATTGTATGGATGTGCCGTTTGTGTTTACTGATTTGTGTTTCTGGATGCATTTTGCTTTCTTATGGCCAGACACAATTCTTATTTTCTGTCCTGATTTAGCTCCTCTCCGTTACTTTTATTACTAGTTTCTAGCATTTTAATTCCCCTCTCGTATACCTTGGAAGAATAGTAGCCTTTCATGCCTTTCCATCGTGTACTTCCAATTCGAGCTTTGGTCATTTTAAGTACTATAAAGAAGAATTAATAAACTTATAAAACTCCTCTTTTCTTTAAGCAGGGTGTCAAAAGGCTCTGTCAGCTTGGGGTCCGCTACTGATTTCAGCTGACATGCTTACCCTTTAG

mRNA sequence

ATGCAGCCTGCACCTGGTGTTGCCCCTCACAACATGCCTCACCAGGCCCCTCAGTACCAACAACAGCAACCTCCTTACATGATGATGCCCCCTCAGCCGCCCCAACCTCAGCCTGTTCCTCAGATGTGGCCTCAGCAGCCACAGGCCGGTTCCCCACAGGGCCAACCCCCTCAGTCTGCCAACGGGGATGAGGTTTCCTCTGTGAAAGTGATTCGGAACAAGCAAACCGGCCAGTCCGAGGGTTACGGTTTTATTGAGTTTTTAACTCGTCCAGCTGCAGAAAGAGTACTTCAAACTTATAATGGCACCGCCATGCCCAATGGGGCACAAAATTTTAGATTGAACTGGGCATCAGCAGGGGAGAAGCGACAAGATGACTCTCCTGATTACACTATTTTTGTGGGAGATTTGGCTGGTGATGTTACTGATTATGTGCTACAAGAAACATTTAGGGCACGCTATAACTCAGTTAAGGGCGCTAAAGTTGTGATTGATAGGCTCACTGGACGCACTAAGGGTTATGGATTTGTTAAGTTTGGGGACGAGTCTGAACAAATGCGAGCAATGACTGAGATGAACGGTGTTCACTGTTCATCCAGACCCATGCGAATCGGACCAGCAGCTAACAAGAACACTTCTGGCGGTCAGCAGTTCTCGAAAAGGTGTCAAAAGGCTCTGTCAGCTTGGGGTCCGCTACTGATTTCAGCTGACATGCTTACCCTTTAG

Coding sequence (CDS)

ATGCAGCCTGCACCTGGTGTTGCCCCTCACAACATGCCTCACCAGGCCCCTCAGTACCAACAACAGCAACCTCCTTACATGATGATGCCCCCTCAGCCGCCCCAACCTCAGCCTGTTCCTCAGATGTGGCCTCAGCAGCCACAGGCCGGTTCCCCACAGGGCCAACCCCCTCAGTCTGCCAACGGGGATGAGGTTTCCTCTGTGAAAGTGATTCGGAACAAGCAAACCGGCCAGTCCGAGGGTTACGGTTTTATTGAGTTTTTAACTCGTCCAGCTGCAGAAAGAGTACTTCAAACTTATAATGGCACCGCCATGCCCAATGGGGCACAAAATTTTAGATTGAACTGGGCATCAGCAGGGGAGAAGCGACAAGATGACTCTCCTGATTACACTATTTTTGTGGGAGATTTGGCTGGTGATGTTACTGATTATGTGCTACAAGAAACATTTAGGGCACGCTATAACTCAGTTAAGGGCGCTAAAGTTGTGATTGATAGGCTCACTGGACGCACTAAGGGTTATGGATTTGTTAAGTTTGGGGACGAGTCTGAACAAATGCGAGCAATGACTGAGATGAACGGTGTTCACTGTTCATCCAGACCCATGCGAATCGGACCAGCAGCTAACAAGAACACTTCTGGCGGTCAGCAGTTCTCGAAAAGGTGTCAAAAGGCTCTGTCAGCTTGGGGTCCGCTACTGATTTCAGCTGACATGCTTACCCTTTAG

Protein sequence

MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSANGDEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTSGGQQFSKRCQKALSAWGPLLISADMLTL*
Homology
[Close]
BLAST of Csa1G063540 vs. Swiss-Prot
Match: RBP45_NICPL (Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia GN=RBP45 PE=1 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 6.4e-67
Identity = 151/266 (56.77%), Postives = 170/266 (63.91%), Query Frame = 1 

Query: 1   MQPAPGVAPHNMPHQAP------QYQQQQPP------YMMMPPQPPQPQPVPQM---WPQ 60
           M P  GVA    P  AP      QYQQQ PP      +MM P QP QPQ  PQ    W Q
Sbjct: 1   MMPQSGVA---QPPMAPMSMDQHQYQQQAPPPTQQQQWMMPPQQPQQPQFQPQSQPAWAQ 60

Query: 61  QP---QAG---------SPQGQPPQSAN---GD------------------EVSSVKVIR 120
           QP   Q G         SP G P +  +   GD                  E+ S KVIR
Sbjct: 61  QPSQQQYGAMATTNPNPSPTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIR 120

Query: 121 NKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAGE-KRQDDSPDYT 180
           NKQTGQSEGYGF+EF +  AAE +LQTYNGT MPN  QNFR+NWAS G  +R+DDS ++T
Sbjct: 121 NKQTGQSEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERRDDSAEHT 180

Query: 181 IFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTE 218
           IFVGDLA DVTDY+LQETF++ Y+SV+GAKVV DR+TGR+KGYGFVKF DESEQ+RAMTE
Sbjct: 181 IFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTE 240


HSP 2 Score: 51.6 bits (122), Expect = 1.4e-05
Identity = 39/154 (25.32%), Postives = 63/154 (40.91%), Query Frame = 1 

Query: 65  VSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNG--------------TAMPNGAQ 124
           V   KV+ ++ TG+S+GYGF++F       R +   NG                 P G  
Sbjct: 203 VRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGVLCSTRPMRIGPAANKKPVGTP 262

Query: 125 NFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGR 184
                      + + D  + TIFVG L   V +  L++ F + Y  +   K+V       
Sbjct: 263 QKATYQNPQATQGESDPNNTTIFVGGLDPTVAEEHLRQVF-SPYGELVHVKIVAG----- 322

Query: 185 TKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRI 205
            K  GFV+FG  +   +A++ +NG     + +R+
Sbjct: 323 -KRCGFVQFGTRASAEQALSSLNGTQLGGQSIRL 349


HSP 3 Score: 42.0 bits (97), Expect = 1.1e-02
Identity = 22/67 (32.84%), Postives = 35/67 (52.24%), Query Frame = 1 

Query: 64  EVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAGEKR 123
           E+  VK++  K+ G      F++F TR +AE+ L + NGT +  G Q+ RL+W  +   +
Sbjct: 307 ELVHVKIVAGKRCG------FVQFGTRASAEQALSSLNGTQL--GGQSIRLSWGRSPSSK 365

Query: 124 QDDSPDY 131
           Q D   +
Sbjct: 367 QTDQTQW 365

[Close]
BLAST of Csa1G063540 vs. Swiss-Prot
Match: RB45B_ARATH (Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana GN=RBP45B PE=1 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 4.3e-63
Identity = 145/254 (57.09%), Postives = 165/254 (64.96%), Query Frame = 1 

Query: 2   QPAPG-VAPHNMPHQAPQYQQ-QQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQS 61
           QP PG + PH+ P  + Q Q   Q PY +    PP PQ    MW   PQA +P    P +
Sbjct: 4   QPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPPPPQ----MW--NPQAAAPPSVQPTT 63

Query: 62  AN-------GD------------------EVSSVKVIRNKQTGQSEGYGFIEFLTRPAAE 121
           A+       GD                  E+ S KVIRNKQTGQ EGYGFIEF +  AAE
Sbjct: 64  ADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAE 123

Query: 122 RVLQTYNGTAMPNGA-QNFRLNWAS--AGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFR 181
           RVLQT+N   +P+   Q FRLNWAS  +G+KR DDSPDYTIFVGDLA DVTDY+L ETFR
Sbjct: 124 RVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILLETFR 183

Query: 182 ARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKN 226
           A Y SVKGAKVVIDR+TGRTKGYGFV+F DESEQ+RAMTEMNGV CS+RPMRIGPAA+K 
Sbjct: 184 ASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKK 243


HSP 2 Score: 57.4 bits (137), Expect = 2.5e-07
Identity = 48/176 (27.27%), Postives = 74/176 (42.05%), Query Frame = 1 

Query: 60  ANGDEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNG------------TAMPN 119
           A+   V   KV+ ++ TG+++GYGF+ F       R +   NG             A   
Sbjct: 177 ASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKK 236

Query: 120 GAQNFRLNWAS--AGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVID 179
           G    R ++ S  AG    +D  + T+FVG L   VTD  L+  F ++Y  +   K+   
Sbjct: 237 GVTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVF-SQYGEIVHVKIPAG 296

Query: 180 RLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIG---PAANKNTSGGQQF 219
                 K  GFV+F ++S    A+  +NGV      +R+      +NK +    QF
Sbjct: 297 ------KRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQSGDPSQF 345

[Close]
BLAST of Csa1G063540 vs. Swiss-Prot
Match: RP45C_ARATH (Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana GN=RBP45C PE=2 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 3.7e-59
Identity = 134/251 (53.39%), Postives = 152/251 (60.56%), Query Frame = 1 

Query: 2   QPAPG-----VAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQ--PQAGSPQ- 61
           QP P        P  +P     Y QQQ  +MM   Q  Q QP P  W QQ  P +G PQ 
Sbjct: 4   QPPPASNGAATGPGQIPSDQQAYLQQQQSWMMQHQQQQQGQP-PAGWNQQSAPSSGQPQQ 63

Query: 62  -------GQPPQSAN-------GD------------------EVSSVKVIRNKQTGQSEG 121
                   Q P SA        GD                  E ++ KVIRNKQ G SEG
Sbjct: 64  QQYGGGGSQNPGSAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEG 123

Query: 122 YGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWAS--AGEKRQDDSPDYTIFVGDLAG 181
           YGFIEF+    AER LQTYNG  MP+  Q FRLNWA   AGE+RQ + P++T+FVGDLA 
Sbjct: 124 YGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAP 183

Query: 182 DVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSS 211
           DVTD++L ETF+A Y+SVKGAKVV DR TGR+KGYGFV+F DESEQ+RAMTEMNG +CSS
Sbjct: 184 DVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSS 243


HSP 2 Score: 48.9 bits (115), Expect = 9.0e-05
Identity = 42/174 (24.14%), Postives = 69/174 (39.66%), Query Frame = 1 

Query: 65  VSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNG-------------------TAM 124
           V   KV+ ++ TG+S+GYGF+ F       R +   NG                   T  
Sbjct: 200 VKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQ 259

Query: 125 PNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVID 184
           P   QN      + G   + D  + TIFVG +   VT+  L+  F  ++  +   K+   
Sbjct: 260 PASYQN------TQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVF-GQFGELVHVKIPAG 319

Query: 185 RLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIG---PAANKNTSGGQ 217
                 K  GFV++ + +   +A++ +NG     + +R+      +NK T   Q
Sbjct: 320 ------KRCGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQTQPDQ 360

[Close]
BLAST of Csa1G063540 vs. Swiss-Prot
Match: RB45A_ARATH (Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana GN=RBP45A PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 6.0e-57
Identity = 126/224 (56.25%), Postives = 142/224 (63.39%), Query Frame = 1 

Query: 6   GVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQ-----GQPPQ-- 65
           G  P    H     QQQQ    M     P  Q    +  Q P + S       G   Q  
Sbjct: 12  GQIPSGQQHLWMMMQQQQQQQQMQLSAAPLGQHQYGIGSQNPGSASDVKSLWIGDLQQWM 71

Query: 66  --------SANGDEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQ 125
                    A   E +S KVIRNK TGQSEGYGFIEF++   AERVLQTYNG  MP+  Q
Sbjct: 72  DENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAPMPSTEQ 131

Query: 126 NFRLNWASAG--EKR-QDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRL 185
            FRLNWA AG  EKR Q + PD+TIFVGDLA +VTDY+L +TF+  Y SVKGAKVV+DR 
Sbjct: 132 TFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRT 191

Query: 186 TGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKN 212
           TGR+KGYGFV+F DE+EQMRAMTEMNG +CS+RPMRIGPAANKN
Sbjct: 192 TGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKN 235


HSP 2 Score: 52.0 bits (123), Expect = 1.1e-05
Identity = 45/171 (26.32%), Postives = 74/171 (43.27%), Query Frame = 1 

Query: 65  VSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNG----------------TAMP-N 124
           V   KV+ ++ TG+S+GYGF+ F       R +   NG                 A+P  
Sbjct: 181 VKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQ 240

Query: 125 GAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRL 184
            A       A+AG+   +D  + TIFVG L  +VTD  L+  F  ++  +   K+     
Sbjct: 241 PAMYQNTQGANAGD---NDPNNTTIFVGGLDANVTDDELKSIF-GQFGELLHVKI----- 300

Query: 185 TGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRI--GPAANKNTSGGQ 217
               K  GFV++ +++    A++ +NG     + +R+  G + NK +   Q
Sbjct: 301 -PPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSPNKQSDQAQ 341

[Close]
BLAST of Csa1G063540 vs. Swiss-Prot
Match: RBP47_NICPL (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia GN=RBP47 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.3e-55
Identity = 118/217 (54.38%), Postives = 142/217 (65.44%), Query Frame = 1 

Query: 9   PHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVP--QMWPQQPQAGSPQGQPPQSANGDEVS 68
           P+   HQ  Q  QQ P  +    +  +   +   Q W  +    S   Q        EV 
Sbjct: 58  PYYQQHQQQQKMQQSPTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQ------AGEVI 117

Query: 69  SVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWA--SAGEKRQ 128
           SVK+IRNKQTGQSE YGF+EF T  AAE+VLQ+YNGT MPN  Q FRLNWA  S GEKR 
Sbjct: 118 SVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRA 177

Query: 129 DDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESE 188
           +   D++IFVGDLA DVTD +L++TF +RY S+KGAKVV+D  TG +KGYGFV+FGDESE
Sbjct: 178 ETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESE 237

Query: 189 QMRAMTEMNGVHCSSRPMRIGPAANKNTSGGQQFSKR 222
           + RAMTEMNGV+CSSR MRIG A  K  S  +Q+S +
Sbjct: 238 RSRAMTEMNGVYCSSRAMRIGVATPKKPSAHEQYSSQ 268


HSP 2 Score: 58.2 bits (139), Expect = 1.5e-07
Identity = 48/186 (25.81%), Postives = 75/186 (40.32%), Query Frame = 1 

Query: 65  VSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRL---------- 124
           +   KV+ +  TG S+GYGF+ F       R +   NG    + A    +          
Sbjct: 204 LKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAHE 263

Query: 125 ----------------NWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVK 184
                             A+ G +   DS + TIFVG L  +VTD  L+++F  ++  V 
Sbjct: 264 QYSSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFN-QFGEVV 323

Query: 185 GAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIG---PAANK--NTS 220
             K+         KG GFV+F D S    A+ +++G     + +R+      ANK   T 
Sbjct: 324 SVKIPAG------KGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRTD 382

[Close]
BLAST of Csa1G063540 vs. TrEMBL
Match: A0A0A0LRL5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G063540 PE=4 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 4.3e-139
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 1 

Query: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSA 60
           MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSA 60

Query: 61  NGDEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAG 120
           NGDEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAG
Sbjct: 61  NGDEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAG 120

Query: 121 EKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFG 180
           EKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFG
Sbjct: 121 EKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFG 180

Query: 181 DESEQMRAMTEMNGVHCSSRPMRIGPAANKNTSGGQQFSKRCQKALSAWGPLLISADMLT 240
           DESEQMRAMTEMNGVHCSSRPMRIGPAANKNTSGGQQFSKRCQKALSAWGPLLISADMLT
Sbjct: 181 DESEQMRAMTEMNGVHCSSRPMRIGPAANKNTSGGQQFSKRCQKALSAWGPLLISADMLT 240

Query: 241 L 242
           L
Sbjct: 241 L 241

[Close]
BLAST of Csa1G063540 vs. TrEMBL
Match: A0A0A0LX40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G063550 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 7.0e-129
Identity = 232/267 (86.89%), Postives = 235/267 (88.01%), Query Frame = 1 

Query: 2   QPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSAN 61
           +PAPGVAPHN+PHQAPQYQQQQPPYMMM PQPPQ QPVPQMWPQQPQAGSPQGQPPQ AN
Sbjct: 103 RPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQPAN 162

Query: 62  GD---------------------------EVSSVKVIRNKQTGQSEGYGFIEFLTRPAAE 121
           GD                           EVSSVKVIRNKQTGQSEGYGFIEFLTRPAAE
Sbjct: 163 GDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAE 222

Query: 122 RVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARY 181
           RVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARY
Sbjct: 223 RVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARY 282

Query: 182 NSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTSG 241
           NSVKGAKVVIDRLTGRTKGYGFVKFGDESEQ+RAMTEMNGVHCSSRPMRIGPAANKNTSG
Sbjct: 283 NSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGPAANKNTSG 342

[Close]
BLAST of Csa1G063540 vs. TrEMBL
Match: A0A0R0JH04_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G259500 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 3.5e-80
Identity = 174/272 (63.97%), Postives = 190/272 (69.85%), Query Frame = 1 

Query: 1   MQPAPGVAPHNMPHQAPQY--QQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQ 60
           MQ  PG     M  QA Q   QQQQ PYMMMPPQP QP   PQMW    Q  S    PPQ
Sbjct: 2   MQAGPG----GMAQQANQQYAQQQQQPYMMMPPQP-QP---PQMWATSAQPPSQSVAPPQ 61

Query: 61  SANGDEV---------------------------SSVKVIRNKQTGQSEGYGFIEFLTRP 120
             + DEV                           +SVKVIRNKQT QSEGYGFIEF +R 
Sbjct: 62  PTSADEVRTLWIGDLQYWMDENYLYTCLAHTGEVASVKVIRNKQTSQSEGYGFIEFTSRA 121

Query: 121 AAERVLQTYNGTAMPNGAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAGDVTDYVLQET 180
            AERVLQTYNGT MPNG QNFRLNWA  SAGE+R DDSPD+TIFVGDLA DVTDY+LQET
Sbjct: 122 GAERVLQTYNGTIMPNGGQNFRLNWATLSAGERRHDDSPDHTIFVGDLAADVTDYLLQET 181

Query: 181 FRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAAN 240
           FRARY S+KGAKVVIDRLTGRTKGYGFV+FGDESEQ+RAMTEM GV CS+RPMRIGPA+N
Sbjct: 182 FRARYPSIKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMTEMQGVLCSTRPMRIGPASN 241

Query: 241 KNTSGGQQFSKRCQKALSAWGPLLISADMLTL 242
           KN S   Q  K CQ+ALS+    LISA+M+T+
Sbjct: 242 KNPSTQSQ-PKGCQEALSSRSLELISAEMVTI 264

[Close]
BLAST of Csa1G063540 vs. TrEMBL
Match: W9RQX1_9ROSA (Polyadenylate-binding protein RBP45B OS=Morus notabilis GN=L484_012860 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 3.9e-79
Identity = 163/251 (64.94%), Postives = 176/251 (70.12%), Query Frame = 1 

Query: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQA--GSPQGQPPQ 60
           MQP  GV P  M  Q PQ+ QQ  PYMMMPPQ  Q  PV   W  Q Q      Q  PPQ
Sbjct: 1   MQPGAGVGPQAMGQQYPQHAQQ--PYMMMPPQAGQAPPV---WAAQGQVATPPQQQAPPQ 60

Query: 61  S-----------------------------ANGDEVSSVKVIRNKQTGQSEGYGFIEFLT 120
           +                              +  EV SVKVIRNKQTGQSEGYGFIEF++
Sbjct: 61  AQLTSADEVRTLWIGDLQYWMEENYLYSCFVHTGEVVSVKVIRNKQTGQSEGYGFIEFVS 120

Query: 121 RPAAERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQET 180
           RPAAER LQT+NG+ MPNGAQNFRLNWASAGEKR DD+PDYTIFVGDLA DVTDY L ET
Sbjct: 121 RPAAERALQTFNGSPMPNGAQNFRLNWASAGEKRSDDTPDYTIFVGDLAADVTDYTLLET 180

Query: 181 FRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAAN 221
           FR RY S+KGAKVVIDRLTGRTKGYGFV+FGDESEQ+RAM EMNGV CS+RPMRIGPAAN
Sbjct: 181 FRGRYPSIKGAKVVIDRLTGRTKGYGFVRFGDESEQIRAMNEMNGVLCSTRPMRIGPAAN 240

[Close]
BLAST of Csa1G063540 vs. TrEMBL
Match: W9RQX1_9ROSA (Polyadenylate-binding protein RBP45B OS=Morus notabilis GN=L484_012860 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.8e-04
Identity = 46/164 (28.05%), Postives = 76/164 (46.34%), Query Frame = 1 

Query: 65  VSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPN--------------GAQ 124
           +   KV+ ++ TG+++GYGF+ F       R +   NG                   G+Q
Sbjct: 183 IKGAKVVIDRLTGRTKGYGFVRFGDESEQIRAMNEMNGVLCSTRPMRIGPAANKNAVGSQ 242

Query: 125 NFRLN--WASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLT 184
            +      +S G + ++D  + TIFVG+L  +VTD  L++ F  +Y  +   K+     T
Sbjct: 243 QYSKASYQSSQGAQNENDPNNTTIFVGNLDSNVTDDHLRQVFH-QYGELVHVKIP----T 302

Query: 185 GRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRI--GPAANK 211
           G  K  GFV+F D S    A+  +NG     + +R+  G + NK
Sbjct: 303 G--KRCGFVQFTDRSCAEEALRMLNGSQLGGQNIRLSWGRSPNK 339


HSP 2 Score: 297.0 bits (759), Expect = 2.1e-77
Identity = 161/247 (65.18%), Postives = 174/247 (70.45%), Query Frame = 1 

Query: 1   MQPAPGVAPH-NMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQS 60
           MQP PG+A   N  +Q  Q QQQQ PYMMM   PPQPQP P MW    Q       PPQ 
Sbjct: 2   MQPGPGMAQQPNQQYQQQQQQQQQQPYMMM---PPQPQP-PPMWAPSAQPPPQSVAPPQP 61

Query: 61  ANGD---------------------------EVSSVKVIRNKQTGQSEGYGFIEFLTRPA 120
            + D                           EV+SVKVIRNKQT QSEGYGFIEF +R  
Sbjct: 62  TSADEVRTLWIGDLQYWMDENYLYTCFAHTGEVASVKVIRNKQTSQSEGYGFIEFTSRAG 121

Query: 121 AERVLQTYNGTAMPNGAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETF 180
           AER+LQTYNGT MPNG QNFRLNWA  SAGE+R DDSPD+TIFVGDLA DVTDY+LQETF
Sbjct: 122 AERILQTYNGTIMPNGGQNFRLNWATFSAGERRHDDSPDHTIFVGDLAADVTDYLLQETF 181

Query: 181 RARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANK 218
           RARY SVKGAKVVIDRLTGRTKGYGFV+FGDESEQ+RAMTEM GV CS+RPMRIGPA+NK
Sbjct: 182 RARYPSVKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMTEMQGVLCSTRPMRIGPASNK 241

[Close]
BLAST of Csa1G063540 vs. TAIR10
Match: AT1G11650.2 (AT1G11650.2 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 242.7 bits (618), Expect = 2.4e-64
Identity = 145/254 (57.09%), Postives = 165/254 (64.96%), Query Frame = 1 

Query: 2   QPAPG-VAPHNMPHQAPQYQQ-QQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQS 61
           QP PG + PH+ P  + Q Q   Q PY +    PP PQ    MW   PQA +P    P +
Sbjct: 4   QPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPPPPQ----MW--NPQAAAPPSVQPTT 63

Query: 62  AN-------GD------------------EVSSVKVIRNKQTGQSEGYGFIEFLTRPAAE 121
           A+       GD                  E+ S KVIRNKQTGQ EGYGFIEF +  AAE
Sbjct: 64  ADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAE 123

Query: 122 RVLQTYNGTAMPNGA-QNFRLNWAS--AGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFR 181
           RVLQT+N   +P+   Q FRLNWAS  +G+KR DDSPDYTIFVGDLA DVTDY+L ETFR
Sbjct: 124 RVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILLETFR 183

Query: 182 ARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKN 226
           A Y SVKGAKVVIDR+TGRTKGYGFV+F DESEQ+RAMTEMNGV CS+RPMRIGPAA+K 
Sbjct: 184 ASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKK 243


HSP 2 Score: 57.4 bits (137), Expect = 1.4e-08
Identity = 48/176 (27.27%), Postives = 74/176 (42.05%), Query Frame = 1 

Query: 60  ANGDEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNG------------TAMPN 119
           A+   V   KV+ ++ TG+++GYGF+ F       R +   NG             A   
Sbjct: 177 ASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKK 236

Query: 120 GAQNFRLNWAS--AGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVID 179
           G    R ++ S  AG    +D  + T+FVG L   VTD  L+  F ++Y  +   K+   
Sbjct: 237 GVTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVF-SQYGEIVHVKIPAG 296

Query: 180 RLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIG---PAANKNTSGGQQF 219
                 K  GFV+F ++S    A+  +NGV      +R+      +NK +    QF
Sbjct: 297 ------KRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQSGDPSQF 345

[Close]
BLAST of Csa1G063540 vs. TAIR10
Match: AT4G27000.1 (AT4G27000.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 229.6 bits (584), Expect = 2.1e-60
Identity = 134/251 (53.39%), Postives = 152/251 (60.56%), Query Frame = 1 

Query: 2   QPAPG-----VAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQ--PQAGSPQ- 61
           QP P        P  +P     Y QQQ  +MM   Q  Q QP P  W QQ  P +G PQ 
Sbjct: 4   QPPPASNGAATGPGQIPSDQQAYLQQQQSWMMQHQQQQQGQP-PAGWNQQSAPSSGQPQQ 63

Query: 62  -------GQPPQSAN-------GD------------------EVSSVKVIRNKQTGQSEG 121
                   Q P SA        GD                  E ++ KVIRNKQ G SEG
Sbjct: 64  QQYGGGGSQNPGSAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEG 123

Query: 122 YGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWAS--AGEKRQDDSPDYTIFVGDLAG 181
           YGFIEF+    AER LQTYNG  MP+  Q FRLNWA   AGE+RQ + P++T+FVGDLA 
Sbjct: 124 YGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAP 183

Query: 182 DVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSS 211
           DVTD++L ETF+A Y+SVKGAKVV DR TGR+KGYGFV+F DESEQ+RAMTEMNG +CSS
Sbjct: 184 DVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSS 243


HSP 2 Score: 48.9 bits (115), Expect = 5.1e-06
Identity = 42/174 (24.14%), Postives = 69/174 (39.66%), Query Frame = 1 

Query: 65  VSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNG-------------------TAM 124
           V   KV+ ++ TG+S+GYGF+ F       R +   NG                   T  
Sbjct: 200 VKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQ 259

Query: 125 PNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVID 184
           P   QN      + G   + D  + TIFVG +   VT+  L+  F  ++  +   K+   
Sbjct: 260 PASYQN------TQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVF-GQFGELVHVKIPAG 319

Query: 185 RLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIG---PAANKNTSGGQ 217
                 K  GFV++ + +   +A++ +NG     + +R+      +NK T   Q
Sbjct: 320 ------KRCGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQTQPDQ 360

[Close]
BLAST of Csa1G063540 vs. TAIR10
Match: AT5G54900.1 (AT5G54900.1 RNA-binding protein 45A)

HSP 1 Score: 222.2 bits (565), Expect = 3.4e-58
Identity = 126/224 (56.25%), Postives = 142/224 (63.39%), Query Frame = 1 

Query: 6   GVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQ-----GQPPQ-- 65
           G  P    H     QQQQ    M     P  Q    +  Q P + S       G   Q  
Sbjct: 12  GQIPSGQQHLWMMMQQQQQQQQMQLSAAPLGQHQYGIGSQNPGSASDVKSLWIGDLQQWM 71

Query: 66  --------SANGDEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQ 125
                    A   E +S KVIRNK TGQSEGYGFIEF++   AERVLQTYNG  MP+  Q
Sbjct: 72  DENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAPMPSTEQ 131

Query: 126 NFRLNWASAG--EKR-QDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRL 185
            FRLNWA AG  EKR Q + PD+TIFVGDLA +VTDY+L +TF+  Y SVKGAKVV+DR 
Sbjct: 132 TFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRT 191

Query: 186 TGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKN 212
           TGR+KGYGFV+F DE+EQMRAMTEMNG +CS+RPMRIGPAANKN
Sbjct: 192 TGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKN 235


HSP 2 Score: 52.0 bits (123), Expect = 6.0e-07
Identity = 45/171 (26.32%), Postives = 74/171 (43.27%), Query Frame = 1 

Query: 65  VSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNG----------------TAMP-N 124
           V   KV+ ++ TG+S+GYGF+ F       R +   NG                 A+P  
Sbjct: 181 VKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQ 240

Query: 125 GAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRL 184
            A       A+AG+   +D  + TIFVG L  +VTD  L+  F  ++  +   K+     
Sbjct: 241 PAMYQNTQGANAGD---NDPNNTTIFVGGLDANVTDDELKSIF-GQFGELLHVKI----- 300

Query: 185 TGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRI--GPAANKNTSGGQ 217
               K  GFV++ +++    A++ +NG     + +R+  G + NK +   Q
Sbjct: 301 -PPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSPNKQSDQAQ 341

[Close]
BLAST of Csa1G063540 vs. TAIR10
Match: AT5G19350.1 (AT5G19350.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 210.7 bits (535), Expect = 1.0e-54
Identity = 116/201 (57.71%), Postives = 135/201 (67.16%), Query Frame = 1 

Query: 27  MMMPPQPPQ-----PQPVPQ---MWPQQPQAGSPQGQPPQS-ANGDEVSSVKVIRNKQTG 86
           MM PPQPPQ     PQ + +   +W    Q    +       +   E+ SVKVIRNK TG
Sbjct: 3   MMHPPQPPQGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITG 62

Query: 87  QSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAGE-KRQDDSPDYTIFVGD 146
           Q EGYGFIEF++  AAER LQTYNGT MP     FRLNWAS G  ++ D  PD++IFVGD
Sbjct: 63  QPEGYGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIFVGD 122

Query: 147 LAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVH 206
           LA DVTDY+LQETFR  Y+SV+GAKVV D  TGR+KGYGFVKF +ESE+ RAM EMNG++
Sbjct: 123 LAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLY 182

Query: 207 CSSRPMRIGPAANKNTSGGQQ 218
           CS+RPMRI  A  K   G QQ
Sbjct: 183 CSTRPMRISAATPKKNVGVQQ 203


HSP 2 Score: 37.0 bits (84), Expect = 2.0e-02
Identity = 15/39 (38.46%), Postives = 24/39 (61.54%), Query Frame = 1 

Query: 79  SEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWA 118
           ++GYG+++F TRP+AE  +Q   G  +  G Q  R++W+
Sbjct: 271 TKGYGYVQFKTRPSAEEAVQRMQGQVI--GQQAVRISWS 307

[Close]
BLAST of Csa1G063540 vs. TAIR10
Match: AT1G49600.1 (AT1G49600.1 RNA-binding protein 47A)

HSP 1 Score: 209.9 bits (533), Expect = 1.7e-54
Identity = 127/239 (53.14%), Postives = 142/239 (59.41%), Query Frame = 1 

Query: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSA 60
           M P P  AP+N        Q Q   Y     Q  Q Q       QQP+ GS         
Sbjct: 70  MYPHPQYAPYNQAAYQQHPQFQYAAYQQQQQQHHQSQ-------QQPRGGSGGDDVKTLW 129

Query: 61  NGD------------------EVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNG 120
            GD                  EVSSVKVIRNKQT QSEGYGF+EFL+R AAE  LQ+++G
Sbjct: 130 VGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSG 189

Query: 121 TAMPNGAQNFRLNWAS--AGEKR-QDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKG 180
             MPN  Q FRLNWAS   GEKR  ++ PD +IFVGDLA DV+D VL ETF  RY SVKG
Sbjct: 190 VTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKG 249

Query: 181 AKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTSG-GQQ 218
           AKVVID  TGR+KGYGFV+FGDE+E+ RAMTEMNG  CSSR MR+G A  K  +  GQQ
Sbjct: 250 AKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQ 301


HSP 2 Score: 57.0 bits (136), Expect = 1.9e-08
Identity = 50/179 (27.93%), Postives = 70/179 (39.11%), Query Frame = 1 

Query: 65  VSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGT--------------------A 124
           V   KV+ +  TG+S+GYGF+ F       R +   NG                      
Sbjct: 240 VKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYG 299

Query: 125 MPNGAQNFRLNWASAGEKRQDD--SPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKV 184
             NG+Q   L     G     D  S + TIFVG L  DVT+  L + F + +  V   K+
Sbjct: 300 QQNGSQALTLAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPF-SDFGEVVSVKI 359

Query: 185 VIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRI--GPAANK---NTSGGQ 217
            +       KG GFV+F +      A+  +NG       +R+  G + NK   + SG Q
Sbjct: 360 PVG------KGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSPNKQWRSDSGNQ 411


HSP 3 Score: 43.5 bits (101), Expect = 2.1e-04
Identity = 45/187 (24.06%), Postives = 76/187 (40.64%), Query Frame = 1 

Query: 24  PPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSANGDEVSSVKVIRNKQTGQSEGYG 83
           PP  +    PP  Q   Q W QQ Q  +   Q P +A       + +++ +Q        
Sbjct: 23  PPPPLQQSTPPPQQQQQQQWQQQQQWMAAMQQYPAAA-------MAMMQQQQMMMYPHPQ 82

Query: 84  FIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTD 143
           +  +  + A ++  Q           Q+ +      G    DD    T++VGDL   + +
Sbjct: 83  YAPY-NQAAYQQHPQFQYAAYQQQQQQHHQSQQQPRGGSGGDDVK--TLWVGDLLHWMDE 142

Query: 144 YVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHC--SSRP 203
             L   F +  N V   KV+ ++ T +++GYGFV+F   S    A+   +GV    + +P
Sbjct: 143 TYLHTCF-SHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQP 198

Query: 204 MRIGPAA 209
            R+  A+
Sbjct: 203 FRLNWAS 198

[Close]
BLAST of Csa1G063540 vs. NCBI nr
Match: gi|700209434|gb|KGN64530.1| (hypothetical protein Csa_1G063540 [Cucumis sativus])

HSP 1 Score: 501.9 bits (1291), Expect = 6.2e-139
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 1 

Query: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSA 60
           MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSA 60

Query: 61  NGDEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAG 120
           NGDEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAG
Sbjct: 61  NGDEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAG 120

Query: 121 EKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFG 180
           EKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFG
Sbjct: 121 EKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFG 180

Query: 181 DESEQMRAMTEMNGVHCSSRPMRIGPAANKNTSGGQQFSKRCQKALSAWGPLLISADMLT 240
           DESEQMRAMTEMNGVHCSSRPMRIGPAANKNTSGGQQFSKRCQKALSAWGPLLISADMLT
Sbjct: 181 DESEQMRAMTEMNGVHCSSRPMRIGPAANKNTSGGQQFSKRCQKALSAWGPLLISADMLT 240

Query: 241 L 242
           L
Sbjct: 241 L 241

[Close]
BLAST of Csa1G063540 vs. NCBI nr
Match: gi|700209435|gb|KGN64531.1| (hypothetical protein Csa_1G063550 [Cucumis sativus])

HSP 1 Score: 468.0 bits (1203), Expect = 1.0e-128
Identity = 232/267 (86.89%), Postives = 235/267 (88.01%), Query Frame = 1 

Query: 2   QPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSAN 61
           +PAPGVAPHN+PHQAPQYQQQQPPYMMM PQPPQ QPVPQMWPQQPQAGSPQGQPPQ AN
Sbjct: 103 RPAPGVAPHNIPHQAPQYQQQQPPYMMMQPQPPQAQPVPQMWPQQPQAGSPQGQPPQPAN 162

Query: 62  GD---------------------------EVSSVKVIRNKQTGQSEGYGFIEFLTRPAAE 121
           GD                           EVSSVKVIRNKQTGQSEGYGFIEFLTRPAAE
Sbjct: 163 GDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAE 222

Query: 122 RVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARY 181
           RVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARY
Sbjct: 223 RVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARY 282

Query: 182 NSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTSG 241
           NSVKGAKVVIDRLTGRTKGYGFVKFGDESEQ+RAMTEMNGVHCSSRPMRIGPAANKNTSG
Sbjct: 283 NSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGPAANKNTSG 342

[Close]
BLAST of Csa1G063540 vs. NCBI nr
Match: gi|449454734|ref|XP_004145109.1| (PREDICTED: polyadenylate-binding protein RBP45 isoform X2 [Cucumis sativus])

HSP 1 Score: 445.7 bits (1145), Expect = 5.3e-122
Identity = 220/247 (89.07%), Postives = 220/247 (89.07%), Query Frame = 1 

Query: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSA 60
           MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSA 60

Query: 61  NGD---------------------------EVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           NGD                           EVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 221
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240

[Close]
BLAST of Csa1G063540 vs. NCBI nr
Match: gi|449454734|ref|XP_004145109.1| (PREDICTED: polyadenylate-binding protein RBP45 isoform X2 [Cucumis sativus])

HSP 1 Score: 56.2 bits (134), Expect = 9.0e-05
Identity = 43/161 (26.71%), Postives = 79/161 (49.07%), Query Frame = 1 

Query: 60  ANGDEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNG---TAMP---------- 119
           A  + V   KV+ ++ TG+++GYGF++F       R +   NG   ++ P          
Sbjct: 179 ARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKN 238

Query: 120 -NGAQNF-RLNWASA-GEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVV 179
            +G Q F + ++ +  G + ++D  + TIFVG+L  +VTD  L++ F  +Y  +   K+ 
Sbjct: 239 TSGGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVF-GQYGELVHVKIP 298

Query: 180 IDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRI 205
           +       K  GFV+F D +    A+  +NG     + +R+
Sbjct: 299 VG------KRCGFVQFADRNCAEEALRVLNGTQIGGQNIRL 332


HSP 2 Score: 445.7 bits (1145), Expect = 5.3e-122
Identity = 220/247 (89.07%), Postives = 220/247 (89.07%), Query Frame = 1 

Query: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSA 60
           MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSA 60

Query: 61  NGD---------------------------EVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           NGD                           EVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 221
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240

[Close]
BLAST of Csa1G063540 vs. NCBI nr
Match: gi|778658428|ref|XP_011652716.1| (PREDICTED: polyadenylate-binding protein RBP45 isoform X3 [Cucumis sativus])

HSP 1 Score: 56.6 bits (135), Expect = 6.9e-05
Identity = 46/179 (25.70%), Postives = 86/179 (48.04%), Query Frame = 1 

Query: 60  ANGDEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNG---TAMP---------- 119
           A  + V   KV+ ++ TG+++GYGF++F       R +   NG   ++ P          
Sbjct: 179 ARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKN 238

Query: 120 -NGAQNF-RLNWASA-GEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVV 179
            +G Q F + ++ +  G + ++D  + TIFVG+L  +VTD  L++ F  +Y  +   K+ 
Sbjct: 239 TSGGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVF-GQYGELVHVKIP 298

Query: 180 IDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIG---PAANKNTSGGQQFS 220
           +       K  GFV+F D +    A+  +NG     + +R+      +NK  +   Q++
Sbjct: 299 VG------KRCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQVADPNQWN 350


HSP 2 Score: 445.7 bits (1145), Expect = 5.3e-122
Identity = 220/247 (89.07%), Postives = 220/247 (89.07%), Query Frame = 1 

Query: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSA 60
           MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSA 60

Query: 61  NGD---------------------------EVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           NGD                           EVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 221
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240

The following BLAST results are available for this feature:
BLAST of Csa1G063540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RBP45_NICPL6.4e-6756.77Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia GN=RBP45 PE=1 S... [more]
RB45B_ARATH4.3e-6357.09Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana GN=RBP45B PE=1 SV=1[more]
RP45C_ARATH3.7e-5953.39Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana GN=RBP45C PE=2 SV=1[more]
RB45A_ARATH6.0e-5756.25Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana GN=RBP45A PE=2 SV=1[more]
RBP47_NICPL3.3e-5554.38Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia GN=RBP47 PE=1 S... [more]
BLAST of Csa1G063540 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRL5_CUCSA4.3e-139100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G063540 PE=4 SV=1[more]
A0A0A0LX40_CUCSA7.0e-12986.89Uncharacterized protein OS=Cucumis sativus GN=Csa_1G063550 PE=4 SV=1[more]
A0A0R0JH04_SOYBN3.5e-8063.97Uncharacterized protein OS=Glycine max GN=GLYMA_07G259500 PE=4 SV=1[more]
W9RQX1_9ROSA3.9e-7964.94Polyadenylate-binding protein RBP45B OS=Morus notabilis GN=L484_012860 PE=4 SV=1[more]
W9RQX1_9ROSA1.8e-0428.05Polyadenylate-binding protein RBP45B OS=Morus notabilis GN=L484_012860 PE=4 SV=1[more]
BLAST of Csa1G063540 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G11650.22.4e-6457.09 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT4G27000.12.1e-6053.39 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT5G54900.13.4e-5856.25 RNA-binding protein 45A[more]
AT5G19350.11.0e-5457.71 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT1G49600.11.7e-5453.14 RNA-binding protein 47A[more]
BLAST of Csa1G063540 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209434|gb|KGN64530.1|6.2e-139100.00hypothetical protein Csa_1G063540 [Cucumis sativus][more]
gi|700209435|gb|KGN64531.1|1.0e-12886.89hypothetical protein Csa_1G063550 [Cucumis sativus][more]
gi|449454734|ref|XP_004145109.1|5.3e-12289.07PREDICTED: polyadenylate-binding protein RBP45 isoform X2 [Cucumis sativus][more]
gi|449454734|ref|XP_004145109.1|9.0e-0526.71PREDICTED: polyadenylate-binding protein RBP45 isoform X2 [Cucumis sativus][more]
gi|778658428|ref|XP_011652716.1|6.9e-0525.70PREDICTED: polyadenylate-binding protein RBP45 isoform X3 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009735 response to cytokinin
cellular_component GO:0005575 cellular_component
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU090939cucumber EST collection version 3.0transcribed_cluster
CU093248cucumber EST collection version 3.0transcribed_cluster
CU099789cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G063540.1Csa1G063540.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU099789CU099789transcribed_cluster
CU093248CU093248transcribed_cluster
CU090939CU090939transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 132..200
score: 2.8E-13coord: 64..105
score: 5.
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 131..205
score: 1.4
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 130..209
score: 16.517coord: 64..119
score: 10
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 123..215
score: 9.8E-22coord: 64..122
score: 1.7
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 64..211
score: 1.3
NoneNo IPR availablePANTHERPTHR24012FAMILY NOT NAMEDcoord: 109..217
score: 8.8
NoneNo IPR availablePANTHERPTHR24012:SF333POLYADENYLATE-BINDING PROTEIN RBP45B-RELATEDcoord: 109..217
score: 8.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G063540Lsi02G006070Bottle gourd (USVL1VR-Ls)culsiB022
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G063540Bottle gourd (USVL1VR-Ls)culsiB019
Csa1G063540Cucumber (Gy14) v2cgybcuB001
Csa1G063540Cucumber (Gy14) v2cgybcuB239
Csa1G063540Melon (DHL92) v3.6.1cumedB022
Csa1G063540Melon (DHL92) v3.6.1cumedB077
Csa1G063540Silver-seed gourdcarcuB0523
Csa1G063540Silver-seed gourdcarcuB0661
Csa1G063540Silver-seed gourdcarcuB0945
Csa1G063540Silver-seed gourdcarcuB1020
Csa1G063540Watermelon (97103) v2cuwmbB000
Csa1G063540Watermelon (97103) v2cuwmbB032
Csa1G063540Wax gourdcuwgoB023
Csa1G063540Wax gourdcuwgoB033
Csa1G063540Cucumber (Chinese Long) v2cucuB035
Csa1G063540Cucumber (Gy14) v1cgycuB015
Csa1G063540Cucumber (Gy14) v1cgycuB087
Csa1G063540Cucurbita maxima (Rimu)cmacuB218
Csa1G063540Cucurbita maxima (Rimu)cmacuB397
Csa1G063540Cucurbita maxima (Rimu)cmacuB649
Csa1G063540Cucurbita maxima (Rimu)cmacuB848
Csa1G063540Cucurbita moschata (Rifu)cmocuB203
Csa1G063540Cucurbita moschata (Rifu)cmocuB380
Csa1G063540Cucurbita moschata (Rifu)cmocuB637
Csa1G063540Cucurbita moschata (Rifu)cmocuB835
Csa1G063540Melon (DHL92) v3.5.1cumeB027
Csa1G063540Melon (DHL92) v3.5.1cumeB083
Csa1G063540Watermelon (Charleston Gray)cuwcgB012
Csa1G063540Watermelon (Charleston Gray)cuwcgB035
Csa1G063540Watermelon (97103) v1cuwmB008
Csa1G063540Watermelon (97103) v1cuwmB043
Csa1G063540Cucurbita pepo (Zucchini)cpecuB029
Csa1G063540Cucurbita pepo (Zucchini)cpecuB055
Csa1G063540Cucurbita pepo (Zucchini)cpecuB474
Csa1G063540Cucurbita pepo (Zucchini)cpecuB506