Csa1G062280 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G062280
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionAnkyrin repeat family protein; contains IPR020683 (Ankyrin repeat-containing domain)
LocationChr1 : 6563949 .. 6565658 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCGGACGACTCACTGGCCTTCACCAAATTGGCTGGAAACGACGGGTTTTAGTTCTGGTGATCACCACCATGGAATAGACGTCGGCGGTGATTATTACGGGGGTTCATCGTCGATGAACGTGAAGGAGGATCAGGATCAGCCGATGATGGGTGGCGACGACGATAAAACTTCACAGCATAAAATGGGTATCAAATGGGCTAGAAATAAACTTCACAGCTTCCATATTCACATATGTAACTTATTTTTATTTATTTACATATGTAATTTAATATTACTACCTTTTGAATTTTTTTCACTCTTTTTTTTCTTTTTTTAAATAGGGAAATTTTAAATATTACTTTTAATGTTGTGTCCTAATAATTTTTTACATAATATTGAATTTTTCTTTGGTAAGGAAAAGCTTGGTAATTAATGTGTCTAATTATGATTAATTGTTGACATCTTTATAAATAAAATCAAAGCCCATACGATATGAAGTTGTTTAGTTTTAGAAAAGTTGAGTCTAGGGAGTTATTTATATATGTAATCTATGGTTATTAATAAAATCTAAAATTTGGGTATATTTTGTAATTTGTAAATATTTCATGATATGATGTATGAAATTTGTTTCAGGGAACCGAAGAAGGGAGCATGATTCAATACATATTCAGCTATGCGAAGCTGCAACAAGAGGCGATTGGAAGGCTGCAGAAGAAATAGAGAAGAAAAGCAAAGGAATCTTATCCGAGGTAATTAGCAAAGATAGAAAAGAAACAGCCCTTCACATTGCTACAAGATTCAACAAAGCTGCTTTTGTGGAGAAATTGATCAAATATAAGCTAACACAAACAGATTTGGAAGCCAAAAATATATATGGAAACACAGCCCTCTGCATTGCTGCTACATCAGGGGCTGTGGATATTGCGGAGTTAATGTTCCGAAAGCATAATGATTTAGTCCTCACTCGTGGCTCGGCCAATGCGACTCCAGTTTTGATTGCTGCTAGATATAAGCATAGCCATATGGTTTCTTTTCTCCTCAAGTCTATGAACAAAATTGTCCAAAAAATGGAAATTAGTGAGCAAATGGAGCTTCTTCTTAGTGCCATTGCCTCTGATCATTACGGTTTGTTGTTCAAAATCTCTACCTACCGCTATTATCTTCTTTTTCTTACTTTTTATACATCAATAATTTGCTTTTCGTTGCAATGGTATTATCAAAAAATGATTCTGTTTAGAACTAATTAAGGTTCGATAGGTTTAAAATAAAGAAAGGTTTAAAATAAATAGTACTTCTATTCTTTAGGTTTGTTCATCTACTAGAGATGTTTGGGTGCACACCTCATCCATGGTACTTTTTATTTAGAATTCATAACAAAATAATCATTAGTTTCTTCGAGGTGAAGAACAAAATGAAGACCCACACAAATCCTTATATTATGTAGCAAGATATGTGGAGGGGTATTTGATCGATCCGAGCTCCTACCATGTATGTATAGTGTATAATAGGTAGGATCAAATAGTTTTCTTAATTCATAACTCATCATATATATTTGTTTCTTTATACAGATATAGCTTTTCTTATTATAGAATGGAACAAGTCATTAGCACTGATACGAGATTCCAACGATTATACACCCTTGCATATAATGGCTCGAAAATCTAATGGCACAATTGGCACAAAAAATAACCCAACCAAGTGGCAATCATCCATCAATAAATGTTAG

mRNA sequence

ATGCAGCGGACGACTCACTGGCCTTCACCAAATTGGCTGGAAACGACGGGTTTTAGTTCTGGTGATCACCACCATGGAATAGACGTCGGCGGTGATTATTACGGGGGTTCATCGTCGATGAACGTGAAGGAGGATCAGGATCAGCCGATGATGGGTGGCGACGACGATAAAACTTCACAGCATAAAATGGGGAACCGAAGAAGGGAGCATGATTCAATACATATTCAGCTATGCGAAGCTGCAACAAGAGGCGATTGGAAGGCTGCAGAAGAAATAGAGAAGAAAAGCAAAGGAATCTTATCCGAGGTAATTAGCAAAGATAGAAAAGAAACAGCCCTTCACATTGCTACAAGATTCAACAAAGCTGCTTTTGTGGAGAAATTGATCAAATATAAGCTAACACAAACAGATTTGGAAGCCAAAAATATATATGGAAACACAGCCCTCTGCATTGCTGCTACATCAGGGGCTGTGGATATTGCGGAGTTAATGTTCCGAAAGCATAATGATTTAGTCCTCACTCGTGGCTCGGCCAATGCGACTCCAGTTTTGATTGCTGCTAGATATAAGCATAGCCATATGGTTTCTTTTCTCCTCAAGTCTATGAACAAAATTGTCCAAAAAATGGAAATTAGTGAGCAAATGGAGCTTCTTCTTAGTGCCATTGCCTCTGATCATTACGATATAGCTTTTCTTATTATAGAATGGAACAAGTCATTAGCACTGATACGAGATTCCAACGATTATACACCCTTGCATATAATGGCTCGAAAATCTAATGGCACAATTGGCACAAAAAATAACCCAACCAAGTGGCAATCATCCATCAATAAATGTTAG

Coding sequence (CDS)

ATGCAGCGGACGACTCACTGGCCTTCACCAAATTGGCTGGAAACGACGGGTTTTAGTTCTGGTGATCACCACCATGGAATAGACGTCGGCGGTGATTATTACGGGGGTTCATCGTCGATGAACGTGAAGGAGGATCAGGATCAGCCGATGATGGGTGGCGACGACGATAAAACTTCACAGCATAAAATGGGGAACCGAAGAAGGGAGCATGATTCAATACATATTCAGCTATGCGAAGCTGCAACAAGAGGCGATTGGAAGGCTGCAGAAGAAATAGAGAAGAAAAGCAAAGGAATCTTATCCGAGGTAATTAGCAAAGATAGAAAAGAAACAGCCCTTCACATTGCTACAAGATTCAACAAAGCTGCTTTTGTGGAGAAATTGATCAAATATAAGCTAACACAAACAGATTTGGAAGCCAAAAATATATATGGAAACACAGCCCTCTGCATTGCTGCTACATCAGGGGCTGTGGATATTGCGGAGTTAATGTTCCGAAAGCATAATGATTTAGTCCTCACTCGTGGCTCGGCCAATGCGACTCCAGTTTTGATTGCTGCTAGATATAAGCATAGCCATATGGTTTCTTTTCTCCTCAAGTCTATGAACAAAATTGTCCAAAAAATGGAAATTAGTGAGCAAATGGAGCTTCTTCTTAGTGCCATTGCCTCTGATCATTACGATATAGCTTTTCTTATTATAGAATGGAACAAGTCATTAGCACTGATACGAGATTCCAACGATTATACACCCTTGCATATAATGGCTCGAAAATCTAATGGCACAATTGGCACAAAAAATAACCCAACCAAGTGGCAATCATCCATCAATAAATGTTAG

Protein sequence

MQRTTHWPSPNWLETTGFSSGDHHHGIDVGGDYYGGSSSMNVKEDQDQPMMGGDDDKTSQHKMGNRRREHDSIHIQLCEAATRGDWKAAEEIEKKSKGILSEVISKDRKETALHIATRFNKAAFVEKLIKYKLTQTDLEAKNIYGNTALCIAATSGAVDIAELMFRKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKSMNKIVQKMEISEQMELLLSAIASDHYDIAFLIIEWNKSLALIRDSNDYTPLHIMARKSNGTIGTKNNPTKWQSSINKC*
Homology
[Close]
BLAST of Csa1G062280 vs. TrEMBL
Match: A0A0A0LUS0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G062280 PE=4 SV=1)

HSP 1 Score: 566.6 bits (1459), Expect = 1.7e-158
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 1 

Query: 1   MQRTTHWPSPNWLETTGFSSGDHHHGIDVGGDYYGGSSSMNVKEDQDQPMMGGDDDKTSQ 60
           MQRTTHWPSPNWLETTGFSSGDHHHGIDVGGDYYGGSSSMNVKEDQDQPMMGGDDDKTSQ
Sbjct: 1   MQRTTHWPSPNWLETTGFSSGDHHHGIDVGGDYYGGSSSMNVKEDQDQPMMGGDDDKTSQ 60

Query: 61  HKMGNRRREHDSIHIQLCEAATRGDWKAAEEIEKKSKGILSEVISKDRKETALHIATRFN 120
           HKMGNRRREHDSIHIQLCEAATRGDWKAAEEIEKKSKGILSEVISKDRKETALHIATRFN
Sbjct: 61  HKMGNRRREHDSIHIQLCEAATRGDWKAAEEIEKKSKGILSEVISKDRKETALHIATRFN 120

Query: 121 KAAFVEKLIKYKLTQTDLEAKNIYGNTALCIAATSGAVDIAELMFRKHNDLVLTRGSANA 180
           KAAFVEKLIKYKLTQTDLEAKNIYGNTALCIAATSGAVDIAELMFRKHNDLVLTRGSANA
Sbjct: 121 KAAFVEKLIKYKLTQTDLEAKNIYGNTALCIAATSGAVDIAELMFRKHNDLVLTRGSANA 180

Query: 181 TPVLIAARYKHSHMVSFLLKSMNKIVQKMEISEQMELLLSAIASDHYDIAFLIIEWNKSL 240
           TPVLIAARYKHSHMVSFLLKSMNKIVQKMEISEQMELLLSAIASDHYDIAFLIIEWNKSL
Sbjct: 181 TPVLIAARYKHSHMVSFLLKSMNKIVQKMEISEQMELLLSAIASDHYDIAFLIIEWNKSL 240

Query: 241 ALIRDSNDYTPLHIMARKSNGTIGTKNNPTKWQSSINKC 280
           ALIRDSNDYTPLHIMARKSNGTIGTKNNPTKWQSSINKC
Sbjct: 241 ALIRDSNDYTPLHIMARKSNGTIGTKNNPTKWQSSINKC 279

[Close]
BLAST of Csa1G062280 vs. TrEMBL
Match: E5GC67_CUCME (Ankyrin repeat family protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 3.5e-100
Identity = 199/250 (79.60%), Postives = 211/250 (84.40%), Query Frame = 1 

Query: 1   MQRTTHWPSPNWLETTGFSSGDHHHGIDVGGDYYGGSSS--MNVKEDQDQPMMGGDDDKT 60
           M RTTH PS NW E TGFSS DHH GI++GGDYY GSSS  +NVKE++DQPMMGGDD KT
Sbjct: 2   MHRTTHRPSSNWPEMTGFSSDDHH-GIEIGGDYYRGSSSAQVNVKEEEDQPMMGGDD-KT 61

Query: 61  SQHKMG---------------NRRREHDSIHIQLCEAATRGDWKAAEEIEKKSKGILSEV 120
           S HKMG                 RREHD IHIQLCEAATRGDWKAAEE+EKK+KGILS V
Sbjct: 62  SHHKMGIKWARNKLHSFNIHSRNRREHDPIHIQLCEAATRGDWKAAEEMEKKNKGILSNV 121

Query: 121 ISKDRKETALHIATRFNKAAFVEKLIKYKLTQTDLEAKNIYGNTALCIAATSGAVDIAEL 180
           ISKDRKETALHIATRFNKAAFVEKLI+ KLT  DLEAKNIYGNTALCIAATSGAVDIA+L
Sbjct: 122 ISKDRKETALHIATRFNKAAFVEKLIESKLTIKDLEAKNIYGNTALCIAATSGAVDIAKL 181

Query: 181 MFRKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKSMNKIVQKMEISEQMELLLSAIA 234
           M RKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLK+M+ IVQKMEISEQMELLLSAIA
Sbjct: 182 MVRKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKAMDLIVQKMEISEQMELLLSAIA 241

[Close]
BLAST of Csa1G062280 vs. TrEMBL
Match: A0A0A0LX18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G060780 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.6e-63
Identity = 129/198 (65.15%), Postives = 159/198 (80.30%), Query Frame = 1 

Query: 83  RGDWKAAEEIEKKSKGI-LSEVISKDRKETALHIATRFNKAAFVEKLIKYKLTQTDLEAK 142
           +GDWKAAE++ ++ + I L +VISKDRKETALHIATRFN  AFV+KL+  +LT+ DLEAK
Sbjct: 2   KGDWKAAEKLVQEHENISLLDVISKDRKETALHIATRFNNTAFVKKLMP-QLTENDLEAK 61

Query: 143 NIYGNTALCIAATSGAVDIAELMFRKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKS 202
           NIYGNT LCIAA +GA DIA+LM  +H +LVL RGS NA P+LIAARYK  HMVS+LLK+
Sbjct: 62  NIYGNTPLCIAAMTGAADIAKLMVDRHEELVLKRGSGNALPLLIAARYKQFHMVSYLLKA 121

Query: 203 MNKIVQKMEISEQMELLLSAIASDHYDIAFLIIEWNKSLALIRDSNDYTPLHIMARKSNG 262
           MN  ++K+  +++ E+L S I+S+ YDIA LI++ N  LAL RD ND TPLHIMA+KSNG
Sbjct: 122 MNSHIKKLNDTDKKEILFSVISSNDYDIALLILKENDHLALERDDNDNTPLHIMAKKSNG 181

Query: 263 TIGTKNNPTKWQSSINKC 280
           TIGTKN  T WQSSINKC
Sbjct: 182 TIGTKNKLTDWQSSINKC 198

[Close]
BLAST of Csa1G062280 vs. TrEMBL
Match: A0A0A0LUR7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059760 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.3e-35
Identity = 99/224 (44.20%), Postives = 139/224 (62.05%), Query Frame = 1 

Query: 12  WLETTGFSSGDHH---HGIDVGGDYYGGSS-SMNVKEDQDQPMMGGDDDKTSQHKMGNRR 71
           W E+      D     HGI    ++  G +     +E+Q Q ++G    +  ++ M   R
Sbjct: 29  WSESVTGGDSDSRKKQHGIHDDDEFEEGETPEQGDEENQHQLVIGSRTPEPPKNDMSWAR 88

Query: 72  R----EHDSIHIQLCEAATRGDWKAAEEIEKKSKGILSEVISKDRKETALHIATRFNKAA 131
                ++ S+  ++ +AA +GDW+ A+++E    G L+ VIS +R ETALHIATR  +A+
Sbjct: 89  SIRVDDNRSLRAKMHQAALKGDWEGAKQMEMMHPGALTMVIS-ERSETALHIATRVKRAS 148

Query: 132 FVEKLIKYKLTQTDLEAKNIYGNTALCIAATSGAVDIAELMFRKHNDLVLTRGSANATPV 191
           FVEKL++ +L + +L +KN YGNTALCIAA SGAV IA+L+  K+  L L RGS NATPV
Sbjct: 149 FVEKLVE-RLDEHELASKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPV 208

Query: 192 LIAARYKHSHMVSFLLKSMNKIVQKMEISEQMELLLSAIASDHY 228
           LIAARYKH  MVS+LL      V  +   EQMELLL AI++D+Y
Sbjct: 209 LIAARYKHKDMVSYLLSQTP--VYGLAREEQMELLLGAISADYY 248

[Close]
BLAST of Csa1G062280 vs. TrEMBL
Match: A0A0A0LU19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058090 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.8e-32
Identity = 94/226 (41.59%), Postives = 136/226 (60.18%), Query Frame = 1 

Query: 55  DDKTSQHKMGNRRREHDSIHIQLCEAATRGDWKAAEEIEKKSKG-ILSEVISKDRKETAL 114
           D++T Q ++  ++       I L  AA +GDW+ AE I K      +S  I++D  ETAL
Sbjct: 101 DEETKQLRITAKK-------ISLYHAALKGDWEKAESILKADTSWSVSNYITRDN-ETAL 160

Query: 115 HIATRFNKAAFVEKLIKYKLTQTDLEAKNIYGNTALCIAATSGAVDIAELMFRKHNDLVL 174
           HIA       FVEKLI   +T  D+   N +GNTALC AATSG V IAELM +K+ DL L
Sbjct: 161 HIAAGAKHVEFVEKLID-TMTLDDMVIINTHGNTALCFAATSGVVRIAELMVKKNKDLPL 220

Query: 175 TRGSANATPVLIAARYKHSHMVSFLLKSMNKIVQKMEISEQMELLLSAIASDHYDIAFLI 234
            RG  NATP+ +A  Y+   M S+L    ++  +++   +Q+ELL++ I SD YDI+  I
Sbjct: 221 IRGFGNATPLFMAISYQRKQMASYLFSVTDR--KQLTSQDQIELLIATIHSDFYDISLEI 280

Query: 235 IEWNKSLALIRD--SNDYTPLHIMARKSNGTIGTKNNPTKWQSSIN 278
           +E N  LA++RD  +N+ T LH++ARK +  I +K+  + W+  IN
Sbjct: 281 LERNPKLAIMRDTKNNNETALHVLARKPS-AISSKSEISIWKKPIN 314

[Close]
BLAST of Csa1G062280 vs. TAIR10
Match: AT5G35830.1 (AT5G35830.1 Ankyrin repeat family protein)

HSP 1 Score: 102.4 bits (254), Expect = 4.5e-22
Identity = 60/153 (39.22%), Postives = 85/153 (55.56%), Query Frame = 1 

Query: 75  IQLCEAATRGDWKAAEEIEKKSKGILSEVISKDRKETALHIATRFNKAAFVEKLIKYKLT 134
           +QL +AA +GDWKAA  I  + K I+ + I+  + ET LHIA       FV  L+   L 
Sbjct: 89  VQLYQAALKGDWKAANGIIIEQKYIIYQKITS-KSETVLHIAVAAKHEGFVRNLLG-SLE 148

Query: 135 QTDLEAKNIYGNTALCIAATSGAVDIAELMFRKHNDLVLTRGSANATPVLIAARYKHSHM 194
             DL  +N+ GNTALC AA SG V+IA+++  K+ DL + RG    TP+ +AA + H  M
Sbjct: 149 SNDLALRNVDGNTALCFAAASGVVEIAKMLIEKNKDLPMIRGGGKTTPIHMAALFGHGEM 208

Query: 195 VSFLLKSMNKIVQKMEISEQMELLLSAIASDHY 228
           V +L K  N   ++    E + L  + I++D Y
Sbjct: 209 VKYLYK--NTRFREFNDEEFVNLFHAVISADIY 237

[Close]
BLAST of Csa1G062280 vs. TAIR10
Match: AT5G60070.1 (AT5G60070.1 ankyrin repeat family protein)

HSP 1 Score: 75.9 bits (185), Expect = 4.5e-14
Identity = 55/187 (29.41%), Postives = 87/187 (46.52%), Query Frame = 1 

Query: 76  QLCEAATRGDWKAAEEI---EKKSKGILSEVISKDRK--ETALHIATRFNKAAFVEKLIK 135
           QL  A  RGD+ A +EI     +S+  L +++ K  +  ETAL++A  +  A  V +LIK
Sbjct: 35  QLLSAVRRGDFSAVKEILSNHMESEDELRDLLRKQNQCGETALYVAAEYGDADVVAELIK 94

Query: 136 YKLTQTDLEAKNIYGNTALCIAATSGAVDIAELMFRKHNDLVLTRGSANATPVLIAARYK 195
           Y   + D E K   G     IAA  G +D+  ++  +H +L +T   +N T +  AA   
Sbjct: 95  YYDLE-DAETKARNGFDPFHIAAKQGELDVLRVLMEEHPELSMTVDLSNTTALHTAAAQG 154

Query: 196 HSHMVSFLLKSMNKIVQKMEISEQMELLLSAIASDHYDIAFLIIEWNKSLALIRDSNDYT 255
           H  +V +LL++    +  +  S     L SA  + H ++   I+      A   D    T
Sbjct: 155 HVEVVEYLLEAAGSSLAAIAKSNGKTALHSAARNGHAEVVKAIVAVEPDTATRTDKKGQT 214

Query: 256 PLHIMAR 258
           PLH+  +
Sbjct: 215 PLHMAVK 220


HSP 2 Score: 35.0 bits (79), Expect = 8.8e-02
Identity = 28/99 (28.28%), Postives = 40/99 (40.40%), Query Frame = 1 

Query: 79  EAATRGDWKAAEEIEKKSKGILSEVI-------------SKDRKETALHIATRFNKAAFV 138
           + ATR D K    +    KG   +V+             +  +  TALH+ATR  +   V
Sbjct: 202 DTATRTDKKGQTPLHMAVKGQSIDVVVELMKGHRSSLNMADSKGNTALHVATRKGRIKIV 261

Query: 139 EKLIKYKLTQTDLEAKNIYGNTALCIAATSGAVDIAELM 165
           E L+    T    +A N  G T L  A  +G   IA ++
Sbjct: 262 ELLLDNNETSPSTKAINRAGETPLDTAEKTGHPQIAAVL 300

[Close]
BLAST of Csa1G062280 vs. TAIR10
Match: AT1G07710.1 (AT1G07710.1 Ankyrin repeat family protein)

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-11
Identity = 54/221 (24.43%), Postives = 103/221 (46.61%), Query Frame = 1 

Query: 44  EDQDQPMMGGDDDKTSQHKMGNRRREHDSIHIQLCEAATRGDWKAAEEIEKKSK-GILSE 103
           E ++  + G    K    K    +R+   +H     A   G+     EI  K++   L++
Sbjct: 2   EGEEDTVAGSSIPKKKMMKQLTGKRDDTLLH----SAVRHGNKDRVVEILTKTRESELNQ 61

Query: 104 VISKDRK--ETALHIATRFNKAAFVEKLIK-YKLTQTDLEAKNIYGNTALCIAATSGAVD 163
           ++ K  +  ETAL++A  +     V+++I  Y L   +++A+N  G  A  IAA  G +D
Sbjct: 62  LLGKQNQSGETALYVAAEYGDVEIVKEMINCYDLALVEIKARN--GFDAFHIAAKQGDLD 121

Query: 164 IAELMFRKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKSMNKIVQKMEISEQMELLL 223
           + +++   H++L +T   +N T +  AA   H+ +V+FLL+ +   +  +  S     L 
Sbjct: 122 VLKVLAEAHSELAMTVDLSNTTALHTAATQGHTEVVNFLLE-LGSSLAGIAKSNGKTALH 181

Query: 224 SAIASDHYDIAFLIIEWNKSLALIRDSNDYTPLHIMARKSN 261
           SA  + H  +   ++    ++A+  D    T LH+  + +N
Sbjct: 182 SASRNGHVKVIKALLASEPAIAIRMDKKGQTALHMAVKGTN 215


HSP 2 Score: 36.2 bits (82), Expect = 4.0e-02
Identity = 27/82 (32.93%), Postives = 43/82 (52.44%), Query Frame = 1 

Query: 87  KAAEEIEKKSKGILSEVISKDRKETALHIATRFNKAAFVEKLIKYKLTQTDLEAKNIYGN 146
           +  EE+ K  +  ++  I+  +  TALHIA R  ++  V+ L+   +  TD +A N  G 
Sbjct: 217 EVVEELIKADRSSIN--IADTKGNTALHIAARKGRSQIVKLLLANNM--TDTKAVNRSGE 276

Query: 147 TALCIAATSGAVDIAELMFRKH 169
           TAL  A   G  ++A L+ +KH
Sbjct: 277 TALDTAEKIGNPEVA-LILQKH 293

[Close]
BLAST of Csa1G062280 vs. TAIR10
Match: AT3G18670.1 (AT3G18670.1 Ankyrin repeat family protein)

HSP 1 Score: 63.5 bits (153), Expect = 2.3e-10
Identity = 53/198 (26.77%), Postives = 94/198 (47.47%), Query Frame = 1 

Query: 68  REHDSIHIQLCEAATRGDWKAAEEIEKKSKGILSEVISKDRKETALHIATRFNKAAFVEK 127
           R+ +S ++ L +    G+ +A ++   ++   L+ +++ +  +T +H A        VE+
Sbjct: 44  RQENSTYLVLFKNIDSGELEATKDFLDRNPEALTAILTSNG-DTPIHKAVLSGHIKIVEE 103

Query: 128 LIK-YKLTQTDLEAKNIYGNTALCIAATSGAVDIAELMFRKHNDLVLTRGSANATPVLIA 187
           +I+     +  L+ KN  G TAL  AAT G V IAE +  K   LV  R +    P+++A
Sbjct: 104 IIRRIHDPEQVLKIKNDNGYTALTYAATGGIVRIAECLVNKCPGLVSVRNAKEHIPIVVA 163

Query: 188 ARYKHSHMVSFL-----LKSMNKIVQKMEISEQ--MELLLSAIASDHYDIAFLIIEWNKS 247
           + Y H H+V +L     L  ++      E   +    L+ + I    Y IA  +I+    
Sbjct: 164 SLYGHKHLVQYLYSHTPLSDLDPCDDSDEHKGKNGAMLVTNCIVDGLYCIALDLIQRYPK 223

Query: 248 LALIRDSNDYTPLHIMAR 258
           LA  RDS++ T +  +A+
Sbjct: 224 LAYTRDSDNDTAIMALAQ 240

[Close]
BLAST of Csa1G062280 vs. TAIR10
Match: AT2G31820.1 (AT2G31820.1 Ankyrin repeat family protein)

HSP 1 Score: 54.7 bits (130), Expect = 1.1e-07
Identity = 46/154 (29.87%), Postives = 73/154 (47.40%), Query Frame = 1 

Query: 108 RKETALHIATRFNKAAFVEKLIKYKLTQTD--LEAKNIYGNTALCIAATSGAVDIAELMF 167
           R +++LHIA R    + V++LI+    +    L  +N+ G T L  AA +G   + E M 
Sbjct: 150 RGDSSLHIAARTGNLSKVKELIRGCGDELKELLSKQNLEGETPLYTAAENGHSIVVEEML 209

Query: 168 RKHNDLVLTRGSANA--TPVLIAARYKHSHMVSFLLKSMNKIVQKMEISEQMELLLSAIA 227
            KH DL     +A     P  +AA+  H  ++  LL++   +    ++S     L +A  
Sbjct: 210 -KHMDLETASIAARNGFDPFHVAAKQGHLEVLKILLETFPNLAMTTDLS-CTTALHTAAT 269

Query: 228 SDHYDIAFLIIEWNKSLALIRDSNDYTPLHIMAR 258
             H D+  L++E + +LA I  +N  T LH  AR
Sbjct: 270 QGHIDVVNLLLETDSNLAKIAKNNGKTALHSAAR 301

[Close]
BLAST of Csa1G062280 vs. NCBI nr
Match: gi|700209406|gb|KGN64502.1| (hypothetical protein Csa_1G062280 [Cucumis sativus])

HSP 1 Score: 566.6 bits (1459), Expect = 2.4e-158
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 1 

Query: 1   MQRTTHWPSPNWLETTGFSSGDHHHGIDVGGDYYGGSSSMNVKEDQDQPMMGGDDDKTSQ 60
           MQRTTHWPSPNWLETTGFSSGDHHHGIDVGGDYYGGSSSMNVKEDQDQPMMGGDDDKTSQ
Sbjct: 1   MQRTTHWPSPNWLETTGFSSGDHHHGIDVGGDYYGGSSSMNVKEDQDQPMMGGDDDKTSQ 60

Query: 61  HKMGNRRREHDSIHIQLCEAATRGDWKAAEEIEKKSKGILSEVISKDRKETALHIATRFN 120
           HKMGNRRREHDSIHIQLCEAATRGDWKAAEEIEKKSKGILSEVISKDRKETALHIATRFN
Sbjct: 61  HKMGNRRREHDSIHIQLCEAATRGDWKAAEEIEKKSKGILSEVISKDRKETALHIATRFN 120

Query: 121 KAAFVEKLIKYKLTQTDLEAKNIYGNTALCIAATSGAVDIAELMFRKHNDLVLTRGSANA 180
           KAAFVEKLIKYKLTQTDLEAKNIYGNTALCIAATSGAVDIAELMFRKHNDLVLTRGSANA
Sbjct: 121 KAAFVEKLIKYKLTQTDLEAKNIYGNTALCIAATSGAVDIAELMFRKHNDLVLTRGSANA 180

Query: 181 TPVLIAARYKHSHMVSFLLKSMNKIVQKMEISEQMELLLSAIASDHYDIAFLIIEWNKSL 240
           TPVLIAARYKHSHMVSFLLKSMNKIVQKMEISEQMELLLSAIASDHYDIAFLIIEWNKSL
Sbjct: 181 TPVLIAARYKHSHMVSFLLKSMNKIVQKMEISEQMELLLSAIASDHYDIAFLIIEWNKSL 240

Query: 241 ALIRDSNDYTPLHIMARKSNGTIGTKNNPTKWQSSINKC 280
           ALIRDSNDYTPLHIMARKSNGTIGTKNNPTKWQSSINKC
Sbjct: 241 ALIRDSNDYTPLHIMARKSNGTIGTKNNPTKWQSSINKC 279

[Close]
BLAST of Csa1G062280 vs. NCBI nr
Match: gi|778664857|ref|XP_011648419.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis sativus])

HSP 1 Score: 563.1 bits (1450), Expect = 2.6e-157
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 1 

Query: 1   MQRTTHWPSPNWLETTGFSSGDHHHGIDVGGDYYGGSSSMNVKEDQDQPMMGGDDDKTSQ 60
           MQRTTHWPSPNWLETTGFSSGDHHHGIDVGGDYYGGSSSMNVKEDQDQPMMGGDDDKTSQ
Sbjct: 1   MQRTTHWPSPNWLETTGFSSGDHHHGIDVGGDYYGGSSSMNVKEDQDQPMMGGDDDKTSQ 60

Query: 61  HKMGNRRREHDSIHIQLCEAATRGDWKAAEEIEKKSKGILSEVISKDRKETALHIATRFN 120
           HKMGNRRREHDSIHIQLCEAATRGDWKAAEEIEKKSKGILSEVISKDRKETALHIATRFN
Sbjct: 61  HKMGNRRREHDSIHIQLCEAATRGDWKAAEEIEKKSKGILSEVISKDRKETALHIATRFN 120

Query: 121 KAAFVEKLIKYKLTQTDLEAKNIYGNTALCIAATSGAVDIAELMFRKHNDLVLTRGSANA 180
           KAAFVEKLIKYKLTQTDLEAKNIYGNTALCIAATSGAVDIAELMFRKHNDLVLTRGSANA
Sbjct: 121 KAAFVEKLIKYKLTQTDLEAKNIYGNTALCIAATSGAVDIAELMFRKHNDLVLTRGSANA 180

Query: 181 TPVLIAARYKHSHMVSFLLKSMNKIVQKMEISEQMELLLSAIASDHYDIAFLIIEWNKSL 240
           TPVLIAARYKHSHMVSFLLKSMNKIVQKMEISEQMELLLSAIASDHYDIAFLIIEWNKSL
Sbjct: 181 TPVLIAARYKHSHMVSFLLKSMNKIVQKMEISEQMELLLSAIASDHYDIAFLIIEWNKSL 240

Query: 241 ALIRDSNDYTPLHIMARKSNGTIGTKNNPTKWQSSINK 279
           ALIRDSNDYTPLHIMARKSNGTIGTKNNPTKWQSSINK
Sbjct: 241 ALIRDSNDYTPLHIMARKSNGTIGTKNNPTKWQSSINK 278

[Close]
BLAST of Csa1G062280 vs. NCBI nr
Match: gi|659067708|ref|XP_008440886.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis melo])

HSP 1 Score: 465.7 bits (1197), Expect = 5.7e-128
Identity = 245/295 (83.05%), Postives = 257/295 (87.12%), Query Frame = 1 

Query: 1   MQRTTHWPSPNWLETTGFSSGDHHHGIDVGGDYYGGSSS--MNVKEDQDQPMMGGDDDKT 60
           M RTTH PS NW E TGFSS DHH GI++GGDYY GSSS  +NVKE++DQPMMGGDD KT
Sbjct: 2   MHRTTHRPSSNWPEMTGFSSDDHH-GIEIGGDYYRGSSSAQVNVKEEEDQPMMGGDD-KT 61

Query: 61  SQHKMG---------------NRRREHDSIHIQLCEAATRGDWKAAEEIEKKSKGILSEV 120
           S HKMG                 RREHD IHIQLCEAATRGDWKAAEE+EKK+KGILS V
Sbjct: 62  SHHKMGIKWARNKLHSFNIHSRNRREHDPIHIQLCEAATRGDWKAAEEMEKKNKGILSNV 121

Query: 121 ISKDRKETALHIATRFNKAAFVEKLIKYKLTQTDLEAKNIYGNTALCIAATSGAVDIAEL 180
           ISKDRKETALHIATRFNKAAFVEKLI+ KLT  DLEAKNIYGNTALCIAATSGAVDIA+L
Sbjct: 122 ISKDRKETALHIATRFNKAAFVEKLIESKLTIKDLEAKNIYGNTALCIAATSGAVDIAKL 181

Query: 181 MFRKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKSMNKIVQKMEISEQMELLLSAIA 240
           M RKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLK+M+ IVQKMEISEQMELLLSAIA
Sbjct: 182 MVRKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKAMDLIVQKMEISEQMELLLSAIA 241

Query: 241 SDHYDIAFLIIEWNKSLALIRDSNDYTPLHIMARKSNGTIGTKNNPTKWQSSINK 279
           SDHYDIAFLII WNKSLALIRDSND TPLHIMARKSNGTIGTK+NPTKWQSSINK
Sbjct: 242 SDHYDIAFLIINWNKSLALIRDSNDDTPLHIMARKSNGTIGTKHNPTKWQSSINK 294

[Close]
BLAST of Csa1G062280 vs. NCBI nr
Match: gi|307136229|gb|ADN34066.1| (ankyrin repeat family protein [Cucumis melo subsp. melo])

HSP 1 Score: 372.9 bits (956), Expect = 5.1e-100
Identity = 199/250 (79.60%), Postives = 211/250 (84.40%), Query Frame = 1 

Query: 1   MQRTTHWPSPNWLETTGFSSGDHHHGIDVGGDYYGGSSS--MNVKEDQDQPMMGGDDDKT 60
           M RTTH PS NW E TGFSS DHH GI++GGDYY GSSS  +NVKE++DQPMMGGDD KT
Sbjct: 2   MHRTTHRPSSNWPEMTGFSSDDHH-GIEIGGDYYRGSSSAQVNVKEEEDQPMMGGDD-KT 61

Query: 61  SQHKMG---------------NRRREHDSIHIQLCEAATRGDWKAAEEIEKKSKGILSEV 120
           S HKMG                 RREHD IHIQLCEAATRGDWKAAEE+EKK+KGILS V
Sbjct: 62  SHHKMGIKWARNKLHSFNIHSRNRREHDPIHIQLCEAATRGDWKAAEEMEKKNKGILSNV 121

Query: 121 ISKDRKETALHIATRFNKAAFVEKLIKYKLTQTDLEAKNIYGNTALCIAATSGAVDIAEL 180
           ISKDRKETALHIATRFNKAAFVEKLI+ KLT  DLEAKNIYGNTALCIAATSGAVDIA+L
Sbjct: 122 ISKDRKETALHIATRFNKAAFVEKLIESKLTIKDLEAKNIYGNTALCIAATSGAVDIAKL 181

Query: 181 MFRKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKSMNKIVQKMEISEQMELLLSAIA 234
           M RKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLK+M+ IVQKMEISEQMELLLSAIA
Sbjct: 182 MVRKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKAMDLIVQKMEISEQMELLLSAIA 241

[Close]
BLAST of Csa1G062280 vs. NCBI nr
Match: gi|778664854|ref|XP_011648417.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis sativus])

HSP 1 Score: 265.4 bits (677), Expect = 1.1e-67
Identity = 143/246 (58.13%), Postives = 181/246 (73.58%), Query Frame = 1 

Query: 45  DQDQPMMGGDDDKTSQHKMGNRRR----------EHDSIHIQLCEAATRGDWKAAEEIEK 104
           +Q +P++  DD K S HK   R+             + +  +LCEAA +GDWKAAE++ +
Sbjct: 32  EQPKPVID-DDKKNSYHKTIIRKELVQTPLCREATKELVETRLCEAAMKGDWKAAEKLVQ 91

Query: 105 KSKGI-LSEVISKDRKETALHIATRFNKAAFVEKLIKYKLTQTDLEAKNIYGNTALCIAA 164
           + + I L +VISKDRKETALHIATRFN  AFV+KL+  +LT+ DLEAKNIYGNT LCIAA
Sbjct: 92  EHENISLLDVISKDRKETALHIATRFNNTAFVKKLMP-QLTENDLEAKNIYGNTPLCIAA 151

Query: 165 TSGAVDIAELMFRKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKSMNKIVQKMEISE 224
            +GA DIA+LM  +H +LVL RGS NA P+LIAARYK  HMVS+LLK+MN  ++K+  ++
Sbjct: 152 MTGAADIAKLMVDRHEELVLKRGSGNALPLLIAARYKQFHMVSYLLKAMNSHIKKLNDTD 211

Query: 225 QMELLLSAIASDHYDIAFLIIEWNKSLALIRDSNDYTPLHIMARKSNGTIGTKNNPTKWQ 280
           + E+L S I+S+ YDIA LI++ N  LAL RD ND TPLHIMA+KSNGTIGTKN  T WQ
Sbjct: 212 KKEILFSVISSNDYDIALLILKENDHLALERDDNDNTPLHIMAKKSNGTIGTKNKLTDWQ 271

The following BLAST results are available for this feature:
BLAST of Csa1G062280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUS0_CUCSA1.7e-158100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G062280 PE=4 SV=1[more]
E5GC67_CUCME3.5e-10079.60Ankyrin repeat family protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0LX18_CUCSA2.6e-6365.15Uncharacterized protein OS=Cucumis sativus GN=Csa_1G060780 PE=4 SV=1[more]
A0A0A0LUR7_CUCSA2.3e-3544.20Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059760 PE=4 SV=1[more]
A0A0A0LU19_CUCSA1.8e-3241.59Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058090 PE=4 SV=1[more]
BLAST of Csa1G062280 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G35830.14.5e-2239.22 Ankyrin repeat family protein[more]
AT5G60070.14.5e-1429.41 ankyrin repeat family protein[more]
AT1G07710.11.6e-1124.43 Ankyrin repeat family protein[more]
AT3G18670.12.3e-1026.77 Ankyrin repeat family protein[more]
AT2G31820.11.1e-0729.87 Ankyrin repeat family protein[more]
BLAST of Csa1G062280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209406|gb|KGN64502.1|2.4e-158100.00hypothetical protein Csa_1G062280 [Cucumis sativus][more]
gi|778664857|ref|XP_011648419.1|2.6e-157100.00PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis sativus][more]
gi|659067708|ref|XP_008440886.1|5.7e-12883.05PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis melo][more]
gi|307136229|gb|ADN34066.1|5.1e-10079.60ankyrin repeat family protein [Cucumis melo subsp. melo][more]
gi|778664854|ref|XP_011648417.1|1.1e-6758.13PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G062280.1Csa1G062280.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 108..137
score: 5.1coord: 144..173
score: 0.95coord: 178..207
score:
IPR020683Ankyrin repeat-containing domainGENE3DG3DSA:1.25.40.20coord: 76..260
score: 5.5
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 107..168
score: 1.
IPR020683Ankyrin repeat-containing domainPROFILEPS50297ANK_REP_REGIONcoord: 108..260
score: 17
IPR020683Ankyrin repeat-containing domainunknownSSF48403Ankyrin repeatcoord: 77..259
score: 4.82
NoneNo IPR availablePANTHERPTHR24177FAMILY NOT NAMEDcoord: 49..258
score: 2.0
NoneNo IPR availablePANTHERPTHR24177:SF42ANKYRIN REPEAT FAMILY PROTEINcoord: 49..258
score: 2.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G062280MELO3C002417Melon (DHL92) v3.5.1cumeB024
Csa1G062280CSPI01G10160Wild cucumber (PI 183967)cpicuB013
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G062280Bottle gourd (USVL1VR-Ls)culsiB019
Csa1G062280Bottle gourd (USVL1VR-Ls)culsiB022
Csa1G062280Cucumber (Gy14) v2cgybcuB001
Csa1G062280Cucumber (Gy14) v2cgybcuB239
Csa1G062280Melon (DHL92) v3.6.1cumedB022
Csa1G062280Melon (DHL92) v3.6.1cumedB077
Csa1G062280Silver-seed gourdcarcuB0523
Csa1G062280Silver-seed gourdcarcuB0661
Csa1G062280Silver-seed gourdcarcuB0945
Csa1G062280Silver-seed gourdcarcuB1020
Csa1G062280Watermelon (97103) v2cuwmbB000
Csa1G062280Watermelon (97103) v2cuwmbB032
Csa1G062280Wax gourdcuwgoB033
Csa1G062280Cucumber (Chinese Long) v2cucuB035
Csa1G062280Cucumber (Gy14) v1cgycuB015
Csa1G062280Cucumber (Gy14) v1cgycuB087
Csa1G062280Cucurbita maxima (Rimu)cmacuB218
Csa1G062280Cucurbita maxima (Rimu)cmacuB397
Csa1G062280Cucurbita maxima (Rimu)cmacuB649
Csa1G062280Cucurbita maxima (Rimu)cmacuB848
Csa1G062280Cucurbita moschata (Rifu)cmocuB203
Csa1G062280Cucurbita moschata (Rifu)cmocuB380
Csa1G062280Cucurbita moschata (Rifu)cmocuB637
Csa1G062280Cucurbita moschata (Rifu)cmocuB835
Csa1G062280Melon (DHL92) v3.5.1cumeB027
Csa1G062280Melon (DHL92) v3.5.1cumeB083
Csa1G062280Watermelon (Charleston Gray)cuwcgB012
Csa1G062280Watermelon (Charleston Gray)cuwcgB035
Csa1G062280Watermelon (97103) v1cuwmB008
Csa1G062280Watermelon (97103) v1cuwmB043
Csa1G062280Cucurbita pepo (Zucchini)cpecuB029
Csa1G062280Cucurbita pepo (Zucchini)cpecuB055
Csa1G062280Cucurbita pepo (Zucchini)cpecuB474
Csa1G062280Cucurbita pepo (Zucchini)cpecuB506